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Clarification of genetic factors of endometriosis onset using Japanese standard genome reference and Japonica array

Research Project

Project/Area Number 15H04978
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Obstetrics and gynecology
Research InstitutionTohoku University

Principal Investigator

YAEGASHI Nobuo  東北大学, 大学病院, 教授 (00241597)

Co-Investigator(Kenkyū-buntansha) 安田 純  東北大学, 東北メディカル・メガバンク機構, 教授 (00281684)
高橋 史朗  東北大学, 大学病院, 特任准教授 (20365183)
渡部 洋  東北医科薬科大学, 医学部, 教授 (80231009)
鈴木 史彦  東北大学, 医学(系)研究科(研究院), 助教 (20400343)
Co-Investigator(Renkei-kenkyūsha) WATANABE Yoh  東北医科薬科大学, 医学部, 教授 (80231009)
Research Collaborator TOKUNAGA Hideki  
SHIBUYA Yusuke  
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥16,510,000 (Direct Cost: ¥12,700,000、Indirect Cost: ¥3,810,000)
Fiscal Year 2017: ¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2016: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2015: ¥5,720,000 (Direct Cost: ¥4,400,000、Indirect Cost: ¥1,320,000)
Keywords婦人科腫瘍学 / 子宮内膜症 / 卵巣明細胞癌 / 遺伝要因 / 遺伝子異常 / 卵巣明細胞腺癌
Outline of Final Research Achievements

We clarified that increase of copy number of the region containing ZNF217 gene and HNF1B gene region, decrease of copy number of CDKN2A gene and ARID3A gene region in ovarian clear cell carcinoma (OCCC). A significant peak on long arm of chromosome 8 was also observed in OCCC. We confirmed that amplification of three coagulation - related genes in OCCC. We discovered that APOBEC-related base mutation is a characteristic change in OCCC and reported for the first time that base mutation by APOBEC contributes to the development of OCCC.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • Research Products

    (9 results)

All 2018 2017 2016

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (8 results) (of which Int'l Joint Research: 4 results)

  • [Journal Article] Identification of somatic genetic alterations in ovarian clear cell carcinoma with next generation sequencing2017

    • Author(s)
      Shibuya Yusuke、Tokunaga Hideki、Saito Sakae、Shimokawa Kazurou、Katsuoka Fumiki、Bin Li、Kojima Kaname、Nagasaki Masao、Yamamoto Masayuki、Yaegashi Nobuo、Yasuda Jun
    • Journal Title

      Genes Chromosomes Cancer.

      Volume: 57 Issue: 2 Pages: 51-60

    • DOI

      10.1002/gcc.22507

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Identification of somatic genetic alterations in ovarian clear cell carcinomas with next generation seqeuencing2018

    • Author(s)
      Yusuke Shibuya, Sakae Saito, Kaname Kojima, Bin Li, Hideki Tokunaga, Masao Nagasaki, Jun Yasuda, Nobuo Yaegashi
    • Organizer
      SRI 64th Annual Scientific Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Identification of somatic genetic alterations in ovarian clear cell carcinomas with next generation sequencing2017

    • Author(s)
      Yusuke Shibuya, Hideki Tokunaga, Sakae Saito, Kaname Kojima, Bin Li, Masao Nagasaki, Jun Yasuda, Nobuo Yaegashi
    • Organizer
      SRI 64th Annual Scientific Meeting
    • Place of Presentation
      ヒルトンオーランドボネットクリーク(Orlando,USA)
    • Year and Date
      2017-03-18
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Identification of somatic genetic alterations in ovarian clear cell carcinomas with next generation sequencing2017

    • Author(s)
      Yusuke Shibuya, Hideki Tokunaga, Sakae Saito, Kaname Kojima, Bin Li, Masao Nagasaki, Jun Yasuda, Nobuo Yaegashi
    • Organizer
      NIH-Japan-JSPS Symposium
    • Place of Presentation
      東北大学星陵キャンパス星陵オーディトリアム(宮城県仙台市)
    • Year and Date
      2017-02-15
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Identification of somatic genetic alterations in ovarian clear cell carcinomas with next generation seqeuencing2017

    • Author(s)
      Yusuke Shibuya, Sakae Saito, Kaname Kojima, Bin Li, Hideki Tokunaga, Masao Nagasaki, Jun Yasuda, Nobuo Yaegashi
    • Organizer
      第59回 日本婦人科腫瘍学会 学術講演会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Identification of somatic genetic alterations in ovarian clear cell carcinomas with next generation seqeuencing2017

    • Author(s)
      Yusuke Shibuya, Sakae Saito, Kaname Kojima, Bin Li, Hideki Tokunaga, Masao Nagasaki, Jun Yasuda, Nobuo Yaegashi
    • Organizer
      第69回 日本産婦人科学会 学術講演会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Identification of somatic genetic alterations in ovarian clear cell carcinomas with next generation sequencing2016

    • Author(s)
      Yusuke Shibuya, Hideki Tokunaga, Sakae Saito, Kaname Kojima, Bin Li, Masao Nagasaki, Jun Yasuda, Nobuo Yaegashi
    • Organizer
      第75回日本癌学会総会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-10-06
    • Related Report
      2016 Annual Research Report
  • [Presentation] Discovery of gene alterations causing ovarian clear cell carcinoma2016

    • Author(s)
      Yusuke Shibuya, Hideki Tokunaga, Sakae Saito, Kaname Kojima, Bin Li, Masao Nagasaki, Jun Yasuda, Nobuo Yaegashi
    • Organizer
      第85回日本婦人科腫瘍学会学術講演会
    • Place of Presentation
      米子コンベンションセンター(鳥取県米子市)
    • Year and Date
      2016-07-09
    • Related Report
      2016 Annual Research Report
  • [Presentation] Discovery of gene alterations causing ovarian clear cell carcinoma2016

    • Author(s)
      Yusuke Shibuya, Jun Yasuda, Hideki Tokunaga, Sakae Saito, Bin Li, Nobuo Yaegashi
    • Organizer
      13th International Congress of Human Genetics
    • Place of Presentation
      国立京都国際会館(京都市)
    • Year and Date
      2016-04-03
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research

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Published: 2015-04-16   Modified: 2019-03-29  

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