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Molecular mechanism underlying the function of plant NLP transcription factors that are master regulators of nitrogen response

Research Project

Project/Area Number 15H05616
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypeSingle-year Grants
Research Field Plant nutrition/Soil science
Research InstitutionThe University of Tokyo

Principal Investigator

Konishi Mineko  東京大学, 生物生産工学研究センター, 特任講師 (20642341)

Project Period (FY) 2015-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥18,590,000 (Direct Cost: ¥14,300,000、Indirect Cost: ¥4,290,000)
Fiscal Year 2018: ¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2017: ¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2016: ¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2015: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Keywords植物栄養 / 硝酸シグナル / 植物栄養学 / 硝酸シグナル応答 / 遺伝子発現
Outline of Final Research Achievements

Plants utilize nitrate not only as a nitrogen source but also as a signaling molecule that induces the expression of genes for nitrate acquisition and utilization. We had previously shown that that nitrate signals induce the gene expression by activating the NLP transcription factors. In this study, we studied this mechanism in detail. We found that nitrate signals activate calcium ion signaling pathway, which in turn leads to the phosphorylation of NLP proteins. The phosphorylated form of NLP proteins is the active form, and activates the gene expression. We also found that the interaction among NLP proteins through their carboxy-terminal PB1 domain is a requisite for the full induction of target genes.

Academic Significance and Societal Importance of the Research Achievements

現代農業では、窒素肥料を施肥することにより収量の増加を実現している。農業のコストや環境負荷を軽減するためには植物の窒素利用効率を高める必要があるとされており、そのためには植物が窒素を利用する仕組みとその調節機構を理解する必要がある。硝酸イオンはシグナルとして、硝酸イオンの獲得や利用に必要な遺伝子や代謝やホルモン合成などに関わる様々な遺伝子の発現を上昇させる役割を担っており、今回、硝酸シグナルがカルシウムシグナルを介して転写因子NLPの活性を調節する機構が明らかになったことで、植物が窒素の獲得を通じて窒素の利用や代謝、そして成長を調節する仕組みへの理解を深めることができたと考えている。

Report

(5 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • Research Products

    (37 results)

All 2019 2018 2017 2016 2015

All Journal Article (7 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 7 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results) Presentation (30 results) (of which Int'l Joint Research: 5 results)

  • [Journal Article] The role of protein-protein interactions mediated by the PB1 domain of NLP transcription factors in nitrate-inducible gene expression2019

    • Author(s)
      Konishi, M. and Yanagisawa, S.
    • Journal Title

      BMC Plant Biology

      Volume: 19 Issue: 1 Pages: 90-90

    • DOI

      10.1186/s12870-019-1692-3

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A NIGT1-centred transcriptional cascade regulates nitrate signalling and incorporates phosphorus starvation signals in Arabidopsis2018

    • Author(s)
      Maeda Yoshie、Konishi Mineko、Kiba Takatoshi、Sakuraba Yasuhito、Sawaki Naoya、Kurai Tomohiro、Ueda Yoshiaki、Sakakibara Hitoshi、Yanagisawa Shuichi
    • Journal Title

      Nature Communications

      Volume: 9 Issue: 1 Pages: 1-14

    • DOI

      10.1038/s41467-018-03832-6

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Repression of nitrogen-starvation responses by members of the Arabidopsis GARP-type transcription factor NIGT1/HRS1 subfamily.2018

    • Author(s)
      Kiba, T., Inaba, J., Kudo, T., Ueda, N., Konishi, M., Mitsuda, N, Takiguchi, Y., Kondou, Y., Yoshizumi, T., Ohme-Takagi, M., Matsui, M., Yano, K., Yanagisawa, S., and Sakakibara, H.
    • Journal Title

      Plant Cell

      Volume: 30 Issue: 4 Pages: 925-945

    • DOI

      10.1105/tpc.17.00810

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Discovery of Nitrate-CPK-NLP signalling in central nutrient-growth networks.2017

    • Author(s)
      Liu, K., Niu, Y., Konishi, M., Wu, Y., Du, H., Sun Chung, H., Li, L., Boudsocq, M., McCormack, M., Maekawa, S., Ishida, T., Zhang, C., Shokat, K., *Yanagisawa, S., *Sheen, J.
    • Journal Title

      Nature

      Volume: 18;545 Issue: 7654 Pages: 311-316

    • DOI

      10.1038/nature22077

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Molecular basis of the nitrogen response in plants.2017

    • Author(s)
      Ueda, Y., Konishi, M. and Yanagisawa, S.
    • Journal Title

      Soil Sci. Plant Nutr.

      Volume: 63 Issue: 4 Pages: 329-341

    • DOI

      10.1080/00380768.2017.1360128

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Direct transcriptional activation of BT genes by NLP transcription factors is a key component of the nitrate response in Arabidopsis2017

    • Author(s)
      Sato, T., Maekawa, S., Konishi, M., Yoshioka, N., Sasaki, Y., Maeda, H., Ishida, T., Kato, Y., Yamaguchi, J. and Yanagisawa, S.
    • Journal Title

      Biochem. Biophys. Res. Commun.

      Volume: 483 Issue: 1 Pages: 380-386

    • DOI

      10.1016/j.bbrc.2016.12.135

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 生物情報科学・細胞生物学的手法から見えてきた 植物栄養応答 1.植物が硝酸イオンに応答して遺伝子発現を制御するメカニズム2016

    • Author(s)
      小西美稲子
    • Journal Title

      日本土壌肥料学雑誌

      Volume: 87 Pages: 260-266

    • NAID

      130005966778

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Presentation] 硝酸シグナルに応答した遺伝子発現誘導におけるNLP転写因子のPB1ドメインの役割2019

    • Author(s)
      小西美稲子,柳澤修一
    • Organizer
      第60回日本植物生理学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Molecular mechanism underlying feedback regulation of nitrogen response by glutamine in plants2019

    • Author(s)
      Pengcheng Guo、Shuichi Yanagisawa、Mineko Konishi
    • Organizer
      第60回日本植物生理学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] シロイヌナズナにおける、硝酸シグナルによるNAD 生合成制御がもたらす広範な代謝動態2019

    • Author(s)
      斉藤守秋、宮城敦子、小西美稲子、川合真紀、柳澤修一
    • Organizer
      第60回日本植物生理学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Roles of the NIGT1-Centered Transcriptional Cascade in the Regulation of Nitrate Uptake and Responses2019

    • Author(s)
      Mineko Konishi、Yoshiaki Ueda、Shuichi Yanagisawa
    • Organizer
      Plant and Animal Genome XXVII
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 硝酸応答性転写因子NLP7におけるPB1ドメインの役割の検討2018

    • Author(s)
      小西美稲子、柳澤修一
    • Organizer
      日本土壌肥料学会2018年度神奈川大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 高等植物におけるグルタミンによる窒素利用関連遺伝子の発現抑制機構の解析2018

    • Author(s)
      郭鵬程、小西美稲子、柳澤修一
    • Organizer
      日本土壌肥料学会2018年度神奈川大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] NLP 転写因子を介した硝酸シグナルによるNAD 生合成制御メカニズム2018

    • Author(s)
      斉藤守秋、小西美稲子、柳澤修一
    • Organizer
      日本土壌肥料学会2018年度神奈川大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 栄養成長におけるシロイヌナズナNIN-Like Protein 2の役割2018

    • Author(s)
      沖津孝幸、小西美稲子、栁澤修一
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] シロイヌナズナにおける硝酸シグナルによるNAD+生合成の制御2018

    • Author(s)
      斉藤守秋、小西美稲子、柳澤修一
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Glutamine-induced Repression of a High-affinity Nitrate Transporter Gene Promoter in Arabidopsis2018

    • Author(s)
      Pengcheng Guo, Mineko Konishi, Shuichi Yanagisawa
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Functional analysis of the NLP family for transcription factors responsible for nitrate response in Arabidopsis2017

    • Author(s)
      Takayuki Okitsu, Mineko Konishi, Shuichi Yanagisawa
    • Organizer
      第58回日本植物生理学会年会
    • Place of Presentation
      鹿児島大学群元キャンパス(鹿児島県鹿児島市)
    • Year and Date
      2017-03-16
    • Related Report
      2016 Annual Research Report
  • [Presentation] The role of NIGT1 transcription factors in nitrate-inducible gene expression2017

    • Author(s)
      Yoshie Maeda, Mineko Konishi, Takatoshi Kiba, Yasuhito Sakuraba, Hitoshi Sakakibara, Shuichi Yanagisawa
    • Organizer
      第58回日本植物生理学会年会
    • Place of Presentation
      鹿児島大学群元キャンパス(鹿児島県鹿児島市)
    • Year and Date
      2017-03-16
    • Related Report
      2016 Annual Research Report
  • [Presentation] P欠乏による硝酸イオン吸収抑制の分子機構2017

    • Author(s)
      小西美稲子、前田佳栄、木羽隆敏、柳澤修一
    • Organizer
      日本土壌肥料学会2017年度仙台大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] シロイヌナズナの硝酸応答を担うNLP転写因子群の機能解析2017

    • Author(s)
      沖津孝幸、小西美稲子、柳澤修一
    • Organizer
      日本土壌肥料学会2017年度仙台大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 硝酸シグナルによるシロイヌナズナNAD+生合成制御の可能性の検討2017

    • Author(s)
      斉藤守秋、小西美稲子、柳澤修一
    • Organizer
      日本土壌肥料学会2017年度仙台大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] シロイヌナズナ高親和性硝酸イオン輸送体NRT2.1遺伝子のグルタミンによる発現抑制2017

    • Author(s)
      郭 鵬程、小西美稲子、柳澤修一
    • Organizer
      日本土壌肥料学会2017年度仙台大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Nitrate may regulate de novo biosynthesis of NAD+ in Arabidopsis2017

    • Author(s)
      Moriaki Saito, Mineko Konishi, Shuichi Yanagisawa
    • Organizer
      Taiwan-Japan Plant Biology 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Glutamine-induced Repression of a High-affinity Nitrate Transporter Gene2017

    • Author(s)
      Pengcheng Guo, Mineko Konishi, Shuichi Yanagisawa
    • Organizer
      Taiwan-Japan Plant Biology 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Functional analysis of the NIN-like protein family for transcription factors responsible for nitrate response in Arabidopsis2017

    • Author(s)
      Takayuki Okitsu, Mineko Konishi, Shuichi Yanagisawa
    • Organizer
      Taiwan-Japan Plant Biology 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The Central Role of NLP Transcription Factors in Nitrate Response2017

    • Author(s)
      Mineko Konishi
    • Organizer
      第58回日本植物生理学会年会
    • Place of Presentation
      鹿児島大学群元キャンパス(鹿児島県鹿児島市)
    • Related Report
      2016 Annual Research Report
  • [Presentation] 硝酸シグナルによるNLP転写因子の翻訳後修飾2016

    • Author(s)
      小西美稲子、前川修吾、石田哲也、柳澤修一
    • Organizer
      日本土壌肥料学会2016年度佐賀大会
    • Place of Presentation
      佐賀大学本庄キャンパス (佐賀県佐賀市)
    • Year and Date
      2016-09-20
    • Related Report
      2016 Annual Research Report
  • [Presentation] 植物の硝酸応答を担うNLP転写因子群の機能解析2016

    • Author(s)
      沖津孝幸、小西美稲子、柳澤修一
    • Organizer
      日本土壌肥料学会2016年度佐賀大会
    • Place of Presentation
      佐賀大学本庄キャンパス (佐賀県佐賀市)
    • Year and Date
      2016-09-20
    • Related Report
      2016 Annual Research Report
  • [Presentation] 硝酸シグナル応答における転写因子群NIGTファミリーの役割2016

    • Author(s)
      前田佳栄、小西美稲子、木羽隆敏、榊原均、柳澤修一
    • Organizer
      日本土壌肥料学会2016年度佐賀大会
    • Place of Presentation
      佐賀大学本庄キャンパス (佐賀県佐賀市)
    • Year and Date
      2016-09-20
    • Related Report
      2016 Annual Research Report
  • [Presentation] 硝酸シグナル応答型転写因子NLPはBT 群の遺伝子発現制御を介して側根伸長を制御する2016

    • Author(s)
      前川修吾、吉岡希、小西美稲子、石田哲也、加藤祐樹、佐々木勇樹、佐藤長緒、山口淳二、柳澤修一
    • Organizer
      日本土壌肥料学会2016年度佐賀大会
    • Place of Presentation
      佐賀大学本庄キャンパス (佐賀県佐賀市)
    • Year and Date
      2016-09-20
    • Related Report
      2016 Annual Research Report
  • [Presentation] POST-TRANSLATIONAL MODIFICATION OF NLP TRANSCRIPTION FACTOR PROTEINS BY NITRATE2016

    • Author(s)
      Mineko Konishi, Shugo Maekawa, Tetsuya Ishida, Shuichi Yanagisawa
    • Organizer
      Third International Conference on the Nitrogen Nutrition of Plants: NITROGEN 2016
    • Place of Presentation
      Corum Conference Centre (Monpellier, France)
    • Year and Date
      2016-08-22
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 硝酸応答性転写因子NLP6、NLP7と相互作用する因子2016

    • Author(s)
      小西美稲子、柳澤修一
    • Organizer
      第57回日本植物生理学会
    • Place of Presentation
      岩手大学上田キャンパス(岩手県盛岡市)
    • Year and Date
      2016-03-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] シロイヌナズナ高親和性硝酸イオン輸送体遺伝子NRT2.1の発現制御メカニズム2016

    • Author(s)
      前田佳栄、小西美稲子、倉井友寛、佐脇直哉、杉本南、柳澤修一
    • Organizer
      第57回日本植物生理学会
    • Place of Presentation
      岩手大学上田キャンパス(岩手県盛岡市)
    • Related Report
      2015 Annual Research Report
  • [Presentation] 硝酸応答性転写因子NLP6、NLP7と相互作用する因子の探索2015

    • Author(s)
      小西美稲子、前川修吾、柳澤修一
    • Organizer
      日本土壌肥料学会2015年度京都大会
    • Place of Presentation
      京都大学吉田キャンパス(京都府京都市)
    • Year and Date
      2015-09-09
    • Related Report
      2015 Annual Research Report
  • [Presentation] シロイヌナズナの硝酸イオン輸送体遺伝子NRT2.1 の発現制御機構2015

    • Author(s)
      前田佳栄、小西美稲子、倉井友寛、佐脇直哉、杉本南、柳澤修一
    • Organizer
      日本土壌肥料学会2015年度京都大会
    • Place of Presentation
      京都大学吉田キャンパス(京都府京都市)
    • Related Report
      2015 Annual Research Report
  • [Presentation] シロイヌナズナにおける硝酸シグナル応答型転写因子NLPの新規標的遺伝子BT 群の機能解析2015

    • Author(s)
      前川修吾、吉岡希、小西美稲子、石田哲也、加藤祐樹、佐々木勇樹、佐藤長緒、山口淳二、柳澤修一
    • Organizer
      日本土壌肥料学会2015年度京都大会
    • Place of Presentation
      京都大学吉田キャンパス(京都府京都市)
    • Related Report
      2015 Annual Research Report

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Published: 2015-04-16   Modified: 2020-03-30  

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