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Investigation of calyculin biosynthesis pathway

Research Project

Project/Area Number 15H05996
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Natural medicines
Research InstitutionHokkaido University

Principal Investigator

EGAMI Yoko  北海道大学, 薬学研究院, 助教 (50758612)

Project Period (FY) 2015-08-28 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2015: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
KeywordsカリクリンA / 生合成 / 薬学
Outline of Final Research Achievements

In this study, we tried to investigation of calyculin A biosynthetic pathway. Uncultured symbiont bacteria Candidatus Entotheonella sp. had been identified as calyculin producer. To obtain functional evidences of uncultured bacterial genome, there is no ways other than manipulate gene in cultivable heterologous host, or establish the cultivation condition. To analysis of the biosynthetic mechanisms for nitrile formation, phosphorylation at C17, and chain-shortening process during calyculin biosynthesis, putative tailoring enzymes and substrates were prepared based on bioinfomation of calyculin biosynthetic gene, and subjected to in vitro analyses. As a result, new compound was detected in CalD enzyme reaction.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • Research Products

    (2 results)

All 2016

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results)

  • [Journal Article] Metagenomic analysis of the sponge Discodermia reveals the production of the cyanobacterial natural product kasumigamide by 'Entotheonella'2016

    • Author(s)
      Nakashima, Y., Egami, Y., Kimura, M., Wakimoto, T., Abe, I.
    • Journal Title

      PLoS ONE

      Volume: 11 Issue: 10 Pages: e0164468-e0164468

    • DOI

      10.1371/journal.pone.0164468

    • NAID

      120005893293

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Calyculin: Nature’s way of making the sponge-derived cytotoxin2016

    • Author(s)
      T. Wakimoto, Y. Egami, I. Abe
    • Journal Title

      Nat. Prod. Rep.

      Volume: 未定 Issue: 6 Pages: 751-760

    • DOI

      10.1039/c5np00123d

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant

URL: 

Published: 2015-08-26   Modified: 2018-03-22  

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