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Substrate identification method for protein phosphatases through the induction of enzyme-substrate intermediate

Research Project

Project/Area Number 15K05560
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Bio-related chemistry
Research InstitutionNiigata University

Principal Investigator

Chuman Yoshiro  新潟大学, 自然科学系, 准教授 (40372263)

Co-Investigator(Renkei-kenkyūsha) Higashimoto Yuichiro  久留米大学, 医学部, 准教授 (40352124)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2017: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsホスファターゼ / リン酸化 / シグナル伝達 / 酵素 / 触媒機構 / がん
Outline of Final Research Achievements

Protein phosphorylation is strictly regulated by protein kinases and protein phosphatases, and disordered regulation of protein phosphorylation often causes serious disease, such as cancer. It is important to identify substrates for Ser/Thr phosphatases to clarify the signal transduction and disease mechanisms, however, there are still no their reliable methods. Here, we developed two novel substrate-identification methods for Ser/Thr phosphatases, one is method termed Phosphorylation Mimic Phage Display (PMPD), to identify substrate for SCP1 phosphatase using peptide phage display libraries with Mg2+ and AlF4- and another is development of substrate trapping mutants for PPM1D phosphatase. These methods can be useful and applicable for other Ser/Thr phosphatases.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (38 results)

All 2018 2017 2016 2015 Other

All Journal Article (8 results) (of which Peer Reviewed: 7 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results) Presentation (25 results) (of which Int'l Joint Research: 6 results,  Invited: 4 results) Book (2 results) Remarks (3 results)

  • [Journal Article] Development of a Substrate Identification Method for Human Scp1 Phosphatase Using Phosphorylation Mimic Phage Display2018

    • Author(s)
      Otsubo Kodai、Yoneda Takashi、Kaneko Atsushi、Yagi Seiya、Furukawa Kazuhiro、Chuman Yoshiro
    • Journal Title

      Protein & Peptide Letters

      Volume: 25 Issue: 1 Pages: 76-83

    • DOI

      10.2174/0929866525666171206114913

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Inhibition of Oncogenic Phosphatase PPM1D by G-quadruplex DNA Aptamer in Cancer Cells2017

    • Author(s)
      Kaneko, A., Furukawa, K., Sakaguchi, K., and Chuman, Y.
    • Journal Title

      Peptide Sci

      Volume: 2016 Pages: 23-24

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Characterization of Enzymatic Activity of FCP/SCP Type Ser/Thr Phosphatase Family2017

    • Author(s)
      Yagi, S., Yoneda, T., Otsubo, K., Furukawa, K., and Chuman, Y
    • Journal Title

      Peptide Sci

      Volume: 2016 Pages: 225-226

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Characterization of Enzymatic Activity of FCP/SCP Type Ser/Thr Phosphatase Family2017

    • Author(s)
      Yagi, S., Yoneda, T., Otsubo, K., Furukawa, K., and Chuman, Y.
    • Journal Title

      Peptide Sci.

      Volume: 2016 Pages: 225-226

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Novel Inhibitors Targeting PPM1D Phosphatase Potently Suppress Cancer Cell Proliferation.2015

    • Author(s)
      Ogasawara, S., Kiyota, Y., Chuman, Y., Kowata, A., Yoshimura, F., Tanino, K., Kamada, R., and Sakaguchi, K.
    • Journal Title

      Bioorg. Med. Chem.

      Volume: 23 Issue: 19 Pages: 6246-6249

    • DOI

      10.1016/j.bmc.2015.08.042

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Synthesis of yellow and red fluorescent 1,3a,6a-triazapentalenes and the theoretical investigation of their optical properties2015

    • Author(s)
      Kosuke Namba, Ayumi Osawa, Akira Nakayama, Akane Mera, Fumi Tano, Yoshiro Chuman, Eri Sakuda, Tetsuya Taketsugu, Kazuyasu Sakaguchi, Noboru Kitamura, Keiji Tanino
    • Journal Title

      Chemical Science

      Volume: 6 Issue: 2 Pages: 1083-1093

    • DOI

      10.1039/c4sc02780a

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Function of Proto-oncogene Product PPM1D and Development of PPM1D Inhibitors for Cancer Chemotherapy.2015

    • Author(s)
      Kamada, R.; Chuman, Y.; Kozakai, Y.; Sakaguchi, K.
    • Journal Title

      Seikagaku. The Journal of Japanese Biochemical Society

      Volume: 87 Pages: 531-538

    • NAID

      40020649963

    • Related Report
      2015 Research-status Report
    • Open Access
  • [Journal Article] Development of the Novel Substrate Identification Methodology for Ser/Thr Phosphatases Using Phosphorylation Mimic Phage Display Library.2015

    • Author(s)
      Otsubo, K., Furukawa K, Chuman, Y.
    • Journal Title

      Peptide Sci.

      Volume: 2016 Pages: 271-272

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Presentation] 発がん関連脱リン酸化酵素を標的とした阻害剤と新規基質同定法の開発2018

    • Author(s)
      中馬 吉郎
    • Organizer
      N-Hybrid conference
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 発がんホスファターゼPPM1Dを標的とした新規基質トラップ変異体の開発2018

    • Author(s)
      八木誠也,古川和広, 中馬吉郎
    • Organizer
      N-Hybrid conference
    • Related Report
      2017 Annual Research Report
  • [Presentation] 金属錯体を用いた疾患関連脱リン酸化酵素に対する新規基質の探索2017

    • Author(s)
      吉田拓弥, 米田崇史, 大坪広大, 古川和広, 中馬吉郎
    • Organizer
      「ユビキタスグリーンケミカルエネルギー連携教育研究センター」第8回研究シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] 抗体模倣低分子タンパク質を用いたファージライブラリの構築2017

    • Author(s)
      山﨑一樹, 馬塲勁典, 古川和広, 中馬吉郎
    • Organizer
      「ユビキタスグリーンケミカルエネルギー連携教育研究センター」第8回研究シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] 脱リン酸化酵素SCPアイソフォームの酵素特性解析2017

    • Author(s)
      石動駿樹, 八木誠也, 古川和広, 中馬吉郎
    • Organizer
      「ユビキタスグリーンケミカルエネルギー連携教育研究センター」第8回研究シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] Development of the Novel Substrate Identification Method for Scp1 Phosphatase Using Peptide Phage Library with AlF4-2017

    • Author(s)
      Kazuki Yamazaki, Kodai Otsubo, Takashi Yoneda, Kazuhiro Furukawa, Yoshiro Chuman
    • Organizer
      The 3rd Japan-Taiwan Bilateral Conference on Protein Phosphatase
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of Novel Substrate-trapping Mutants for Oncogenic Ser/Thr Protein Phosphatase PPM1D.2017

    • Author(s)
      Seiya Yagi, Kazuhiro Furukawa, Yoshiro Chuman
    • Organizer
      The 3rd Japan-Taiwan Bilateral Conference on Protein Phosphatase
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Role of Ser/Thr Phosphatase PPM1D through the Down-regulation of TOP2A on Genome Instability2017

    • Author(s)
      Fumiya Suzuki, Sari Ogasawara, Kazuhiro Furukawa, Kazuyasu Sakaguchi, and Yoshiro Chuman
    • Organizer
      The 3rd Japan-Taiwan Bilateral Conference on Protein Phosphatase
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Structure-activity Relationship Analysis of Ion-responsive DNA Aptamer Targeting Oncogenic Phosphatase PPM1D2017

    • Author(s)
      Atsushi Kaneko, Masatoshi Eguchi, Kazuhiro Furukawa, Yoshiro Chuman
    • Organizer
      The 3rd Japan-Taiwan Bilateral Conference on Protein Phosphatase
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of Specific Inhibitors for Oncogenic PPM1D Phosphatase Using Rigid-scaffold Structural Libraries2017

    • Author(s)
      Atsushi, Kaneko, Kazuki Yamazaki, Seiya Yagi, Kazuhiro Furukawa, Yoshiro Chuman
    • Organizer
      The 3rd Japan-Taiwan Bilateral Conference on Protein Phosphatase
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] イオン刺激応答性DNAアプタマーを母体とした発がんタンパク質阻害剤の開発2017

    • Author(s)
      中馬吉郎、金子敦巳,古川和広
    • Organizer
      日本核酸医薬学会大3回年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 立体制約型抗体模倣分子を用いたファージライブラリーの構築と応用2017

    • Author(s)
      山﨑一樹, 馬塲勁典, 古川和広, 中馬吉郎
    • Organizer
      第58回新潟生化学懇話会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 基質トラップ変異体を用いたがん関連ホスファターゼPPM1Dに対する新規基質同定法の開発2017

    • Author(s)
      八木誠也,古川和広, 中馬吉郎
    • Organizer
      第58回新潟生化学懇話会
    • Related Report
      2017 Annual Research Report
  • [Presentation] イオン応答性核酸ライブラリを用いた発がんホスファターゼ機能制御法の開発2017

    • Author(s)
      金子敦巳, 古川和広, 中馬吉郎
    • Organizer
      第58回新潟生化学懇話会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Development of substrate-trapping mutant to identify the novel substrates of oncogenic protein phosphatase PPM1D2017

    • Author(s)
      Seiya Yagi, Kazuhiro Furukawa, and Yoshiro Chuman
    • Organizer
      ユビキタスグリーンケミカルエネルギー連携教育研究センター 第7回研究シンポジウム
    • Place of Presentation
      新潟大学(新潟県新潟市)
    • Related Report
      2016 Research-status Report
  • [Presentation] Screening of binding molecules for Ser/Thr phosphatases from rigid structural libraries2016

    • Author(s)
      Yoshiro Chuman
    • Organizer
      第12回プロテインホスファターゼ国際カンファレンス(ICPP12)
    • Place of Presentation
      近畿大学(大阪府東大阪市)
    • Year and Date
      2016-10-27
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] CHARACTERIZATION OF ENZYMATIC ACTIVITY OF FCP/SCP TYPE SER/THR PHOSPHATASE FAMILY2016

    • Author(s)
      Seiya Yagi, Takashi Yoneda, Kodai Otsubo, Kazuhiro Furukawa, and Yoshiro Chuman
    • Organizer
      第53回ペプチド討論会
    • Place of Presentation
      京都テルサ(京都府京都市)
    • Year and Date
      2016-10-26
    • Related Report
      2016 Research-status Report
  • [Presentation] 酵素-基質複合体誘導によるSer/Thrホスファターゼ基質同定法の開発と応用2016

    • Author(s)
      中馬 吉郎
    • Organizer
      第89回日本生化学会
    • Place of Presentation
      仙台国際センター(宮城県仙台市)
    • Year and Date
      2016-09-25
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] リン酸化模倣ファージディスプレイによるSer/Thrホスファターゼ基質同定法の開発2016

    • Author(s)
      大坪 広大、 米田崇史、 古川和広、 中馬 吉郎
    • Organizer
      第6回 グリーンケミストリー研究会
    • Place of Presentation
      新潟大学(新潟市)
    • Year and Date
      2016-03-15
    • Related Report
      2015 Research-status Report
  • [Presentation] 発癌関連ホスファターゼに対する新規基質同定法と阻害剤の開発2016

    • Author(s)
      中馬吉郎
    • Organizer
      第22回ペプチドフォーラム
    • Place of Presentation
      金沢大学サテライトプラザ(金沢市)
    • Year and Date
      2016-03-05
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] リン酸化ミミック分子によるSer/Thrプロテインホスファターゼ基質同定法の開発2016

    • Author(s)
      大坪 広大, 古川 和広, 中馬 吉郎
    • Organizer
      第7回日本プロテインホスファターゼ研究会学術集会
    • Place of Presentation
      自然科学研究機構(岡崎市)
    • Year and Date
      2016-01-29
    • Related Report
      2015 Research-status Report
  • [Presentation] 立体制約型libraryを用いた疾患関連タンパク質結合分子の同定2016

    • Author(s)
      中馬 吉郎
    • Organizer
      フォーラム「生命科学談話シリーズ」
    • Place of Presentation
      九州大学博多駅オフィス(福岡県福岡市)
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] プロテインホスファターゼの制御破綻による発がん機構と抗がん剤開発2016

    • Author(s)
      中馬 吉郎
    • Organizer
      第84回新潟大学理学部コロキウム
    • Place of Presentation
      新潟大学(新潟県新潟市)
    • Related Report
      2016 Research-status Report
  • [Presentation] DEVELOPMENT OF THE NOVEL SUBSTRATE IDENTIFICATION METHODOLOGY FOR SER/THR PHOSPHATASES USING PHOSPHORYLATION MIMIC PHAGE DISPLAY LIBRARY2015

    • Author(s)
      Kodai Otsubo, Kazuhiro Furukawa, Yoshiro Chuman
    • Organizer
      第52回ペプチド討論会
    • Place of Presentation
      平塚中央貢民会(平塚市)
    • Year and Date
      2015-11-16
    • Related Report
      2015 Research-status Report
  • [Presentation] リン酸化ミミックファージディスプレイによるホスファターゼ基質同定法の開発2015

    • Author(s)
      大坪 広大, 古川 和広, 中馬 吉郎
    • Organizer
      H27年度生化学会 関東支部会・第56回新潟生化学懇話会
    • Place of Presentation
      新潟日報メディアシップ(新潟市)
    • Year and Date
      2015-06-20
    • Related Report
      2015 Research-status Report
  • [Book] 発がん関連Ser/Thrホスファターゼに対する新規阻害剤と基質同定法の開発2018

    • Author(s)
      八木 誠也,金子 敦巳, 山崎 一樹,吉田 拓弥, 中馬 吉郎
    • Total Pages
      4
    • Publisher
      BIO Clinica 北隆館
    • Related Report
      2017 Annual Research Report
  • [Book] 発がん関連Ser/Thrホスファターゼに対する新規阻害剤の開発2017

    • Author(s)
      金子 敦巳, 中馬 吉郎
    • Total Pages
      4
    • Publisher
      BIO Clinica 北隆館
    • Related Report
      2017 Annual Research Report
  • [Remarks] 中馬研究室HP

    • URL

      http://chem.sc.niigata-u.ac.jp/~chuman/

    • Related Report
      2017 Annual Research Report
  • [Remarks] 研究室ホームページ

    • URL

      http://chem.sc.niigata-u.ac.jp/~chuman/

    • Related Report
      2016 Research-status Report 2015 Research-status Report
  • [Remarks] 日本ペプチド学会ホームページ

    • URL

      http://www.peptide-soc.jp/pnj/

    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-12-27  

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