• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

A mathematical model for distribution of bacterial cells biased by chemotaxis and its validation through comparison with observation

Research Project

Project/Area Number 15K05796
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Fluid engineering
Research InstitutionTottori University

Principal Investigator

GOTO Tomonobu  鳥取大学, 工学研究科, 教授 (00260654)

Co-Investigator(Kenkyū-buntansha) 中井 唱  鳥取大学, 工学研究科, 准教授 (80452548)
Project Period (FY) 2015-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2018: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2017: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2016: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2015: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Keywords走化性 / ランダムウォーク / 対流拡散方程式 / 細菌 / 分布 / 定常分布 / 離散モデル / バイアス / キャピラリーアッセイ / 一次元
Outline of Final Research Achievements

Microorganisms in nature distribute inhomogeneously. This partially depends on the chemotaxis, in which they sense attractant chemicals and migrate towards the favorite direction. Bacteria, the simplest creature exhibiting the chemotaxis, change their direction randomly. During the motion, a bacterial cell sense attractant chemical concentrations at two spatially different points at two times and judge whether it has approached a favorable environment or not. This process includes data comparison at two times and causes a finite time delay. We have developed a mathematical model for the existence probability of bacterial cells migrating around a chemical attractant. Moreover, we have observed Salmonella cells’ distributions around a tip of a capillary which contains serine. Comparing the calculated and observed results, we have examined the strength of chemotaxis of bacterial cells.

Academic Significance and Societal Importance of the Research Achievements

細菌はぬめりに代表されるバイオフィルムを形成して,湖沼や海,他の生物の生体内における物質循環に寄与している.また,少し大きな微生物の餌として食物連鎖の一部になっている.細菌の分布や集積速度を予測することは,バイオフィルムの成長速度や環境中における物質循環量の予測に繋がるものである.走化性によって集積する細菌の分布や集積速度を細菌単体の単純な運動モデルから求めようとした.

Report

(4 results)
  • 2018 Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (15 results)

All 2017 2016 2015

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 3 results,  Acknowledgement Compliant: 2 results) Presentation (12 results) (of which Int'l Joint Research: 4 results,  Invited: 2 results)

  • [Journal Article] Steady distribution of cells in a one-dimensional biased random walk model of bacterial chemotaxis2016

    • Author(s)
      Tomonobu Goto, Tonau Nakai
    • Journal Title

      Journal of Biomechanical Science and Engineering

      Volume: 11 Issue: 2 Pages: 15-00587-15-00587

    • DOI

      10.1299/jbse.15-00587

    • NAID

      130005159000

    • ISSN
      1880-9863
    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Analysis of the velocity correlation in the collective motion of bacteria2015

    • Author(s)
      Tonau Nakai, Yoshihiro Mouri, Tomonobu Goto
    • Journal Title

      Journal of Aero Aqua Bio-mechanisms

      Volume: 4 Issue: 1 Pages: 32-36

    • DOI

      10.5226/jabmech.4.32

    • NAID

      130005093444

    • ISSN
      2185-1522
    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] A One-dimensional Discrete Model of Biased Random Walk Relating to Bacterial Chemo-taxis2015

    • Author(s)
      Tomonobu Goto, Tonau Nakai
    • Journal Title

      Journal of Aero Aqua Bio-mechanisms

      Volume: 4 Issue: 1 Pages: 18-24

    • DOI

      10.5226/jabmech.4.18

    • NAID

      130005084257

    • ISSN
      2185-1522
    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] サルモネラ菌の方向転換における走化性の影響2017

    • Author(s)
      吉野純平,梶谷真未,中井唱,後藤知伸
    • Organizer
      第36回エアロ・アクアバイオメカニズム学会
    • Place of Presentation
      千葉大学
    • Year and Date
      2017-03-21
    • Related Report
      2016 Research-status Report
  • [Presentation] 誘引物質に集まるサルモネラ菌の分布の計測とモデル計算2017

    • Author(s)
      吉野純平,中井唱,後藤知伸
    • Organizer
      日本機械学会 2017年度年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] BACTERIAL CELLS DISTRIBUTION MIGRATING AROUND A CHEMICAL ATTRACTANT SOURCE2017

    • Author(s)
      Tomonobu Goto, Mami Kajitani, Junpei Yoshino, Hiroki Mitsui and Tonau Nakai
    • Organizer
      XXVI Congress of the International Society of Biomechanics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] サルモネラ菌の方向転換における走化性の影響2017

    • Author(s)
      吉野純平,梶谷真未,中井唱,後藤知伸
    • Organizer
      エアロ・アクアバイオメカニズム学会 第36回定例講演会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 方向転換の指向性が誘引物質まわりの細菌分布に及ぼす影響に関するモデル計算2016

    • Author(s)
      後藤知伸,中井唱,吉野純平
    • Organizer
      日本機械学会 2016年度年次大会
    • Place of Presentation
      九州大学
    • Year and Date
      2016-09-12
    • Related Report
      2016 Research-status Report
  • [Presentation] Bacterial cells’ distribution around an attractant calculated by a biased random walk model2016

    • Author(s)
      Tomonobu Goto
    • Organizer
      Workshop on Micro-Organisms in Stokes Flows
    • Place of Presentation
      岡山大学
    • Year and Date
      2016-08-31
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] A discrete biased random walk model based on bacterial chemotaxis2016

    • Author(s)
      Tomonobu Goto, Tonau Nakai
    • Organizer
      The 24th International Congress of Theoretical and Applied Mechanics
    • Place of Presentation
      Montreal, Canada
    • Year and Date
      2016-08-23
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 細菌(バクテリア)の泳ぎ - 個体の運動,集団の運動-2016

    • Author(s)
      後藤知伸
    • Organizer
      鳥取大学サイエンス・アカデミー417回 生物を学ぶ・生物に学ぶシリーズ第6回
    • Place of Presentation
      鳥取県立図書館
    • Year and Date
      2016-06-25
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] Steady Distribution of Cells in One-Dimensional Biased Random Walk Model Relating to Bacterial Chemo-Taxis2015

    • Author(s)
      Tomonobu Goto, Tonau Nakai
    • Organizer
      The 8th Asian-Pacific Conference on Biomechanics
    • Place of Presentation
      Sapporo
    • Year and Date
      2015-09-18
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Observation and Numerical Simulation of the Spatio-Temporal Structure in the Collective Motion of Bacteria2015

    • Author(s)
      Tonau Nakai, Yoshihiro Mouri, Tomonobu Goto
    • Organizer
      The 8th Asian-Pacific Conference on Biomechanics
    • Place of Presentation
      Sapporo
    • Year and Date
      2015-09-18
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] 細菌の走化性に基づいたバイアス付きランダムウォークの離散モデル2015

    • Author(s)
      後藤知伸,中井唱
    • Organizer
      日本機械学会 2015年度年次大会
    • Place of Presentation
      札幌
    • Year and Date
      2015-09-16
    • Related Report
      2015 Research-status Report
  • [Presentation] 細菌の集団運動の時空間構造計測と数値シミュレーション2015

    • Author(s)
      中井唱,毛利佳裕,後藤知伸
    • Organizer
      日本機械学会 ロボティクス・メカトロニクス講演会
    • Place of Presentation
      京都
    • Year and Date
      2015-05-18
    • Related Report
      2015 Research-status Report

URL: 

Published: 2015-04-16   Modified: 2020-03-30  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi