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Rapid clonig and transfer of a huge genome DNA using human artificial chromosome

Research Project

Project/Area Number 15K06927
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field System genome science
Research InstitutionKazusa DNA Research Institute

Principal Investigator

Hasegawa Yoshinori  公益財団法人かずさDNA研究所, バイオ研究開発部, チーム長 (30387683)

Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2017: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2016: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Keywords巨大ゲノム / クローニング / ヒト人工染色体 / 部位特異的組換え / Vlox / Slox / 巨大DNA / 巨大ゲノム領域 / ベクター / トランスファー
Outline of Final Research Achievements

It was increased an insertion efficiency of VLox and SLox sites, which are used for site specific recombination, on both sides of the target gene (GOI) by optimizing the reaction conditions of a CRISPR/Cas9 system. However, the efficiency varied greatly among cell types. On the other hand, the efficiency of the GOI into the HAC vector was little difference between cell types, and also succeeded for GOI with a total DNA length of 600 kb. It was suceeded in tarnsferring HAC vector carrying GOI to other cells in all cell types tested . By selecting the host cell type, it was possible to complete the process up to cloning of the large GOI into the HAC vector, and transfer of the HAC vector carrying the GOI to the target cell in 2 months.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (7 results)

All 2018 2017 2016 2015

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 2 results) Presentation (4 results)

  • [Journal Article] Identification of new abscisic acid receptor agonists using a wheat cell-free based drug screening system2018

    • Author(s)
      Nemoto Keiichirou、Kagawa Makiko、Nozawa Akira、Hasegawa Yoshinori、Hayashi Minoru、Imai Kenichiro、Tomii Kentaro、Sawasaki Tatsuya
    • Journal Title

      Scientific Reports

      Volume: 8 Issue: 1 Pages: 4268-4268

    • DOI

      10.1038/s41598-018-22538-9

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Rbm10 regulates inflammation development via alternative splicing of Dnmt3b.2017

    • Author(s)
      Atsumi T, Suzuki H, Jiang JJ, Okuyama Y, Nakagawa I, Ota M, Tanaka Y, Ohki T, Katsunuma K, Nakajima K, Hasegawa Y, Ohara O, Ogura H, Arima Y, Kamimura D, Murakami M.
    • Journal Title

      Int Immunol.

      Volume: 29(12) Issue: 12 Pages: 581-591

    • DOI

      10.1093/intimm/dxx067

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] De Novo Assembly of the Transcriptome of Turritopsis, a Jellyfish that Repeatedly Rejuvenates2016

    • Author(s)
      Yoshinori Hasegawa , Takashi Watanabe , Masaki Takazawa , Osamu Ohara and Shin Kubota
    • Journal Title

      Zoological Science

      Volume: 33 Issue: 4 Pages: 366-371

    • DOI

      10.2108/zs150186

    • NAID

      120005829359

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Presentation] コムギ無細胞系を基盤としたABA 受容体とプロテインホスファターゼの相互作用の解析とその解析系を利用した新規ABA アゴニスト化合物の同定2017

    • Author(s)
      根本圭一郎、香川真貴子、野澤 彰、長谷川嘉則、林実、今井賢一郎、富井健太郎、澤崎達也
    • Organizer
      植物化学調節学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 次世代シークエンサーの活用法と次世代シークエンサーを用いた若返るベニクラゲの研究2017

    • Author(s)
      長谷川嘉則
    • Organizer
      ベニクラゲ研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Genetic and transcriptional analyses of plasma cells in POEMS syndrome2017

    • Author(s)
      永尾侑平、三村尚也、竹田淳恵、吉田健一、塩澤裕介、大島基彦、青山和正、更屋敦則、長谷川嘉則、白石友一、千葉健一、田中洋子、川尻-真子千華、大島-長谷川渚、塚本祥吉、酒井紫緒、竹田勇輔、大和田千桂子、武内正博、堺田惠美子、井関徹、三澤園子、宮野悟、小原收、横手幸太郎、桑原聡、真田昌、岩間厚志、小川誠司、中世古知昭
    • Organizer
      日本血液学会学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 新規部位特異的組み換え酵素システムVCre/VloxPシステムとSCre/SloxPシステムを利用した哺乳類細胞における高効率遺伝子カセット挿入法2015

    • Author(s)
      長谷川嘉則、渡辺貴志、池野正史、小原収、中山学
    • Organizer
      第38回日本分子生物学会年会、第88回日本生化学会大会 合同大会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2015-12-03
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-03-29  

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