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Exploration into the effects of lipid envionment on the functions of sarcoplasmic reticulum calcium pump

Research Project

Project/Area Number 15K06988
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Functional biochemistry
Research InstitutionAsahikawa Medical College

Principal Investigator

YAMASAKI Kazuo  旭川医科大学, 医学部, 講師 (60241428)

Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2017: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywordsカルシウムポンプ / タンパク-脂質相互作用 / ナノディスク / 静電的相互作用 / リン脂質 / 膜タンパク質 / 表面電荷 / 生体エネルギー変換 / タンパク質-脂質連関 / イオン輸送 / 膜タンパク
Outline of Final Research Achievements

To explore the effects of lipid environment on the function of sarcoplasmic reticulum Ca2+-ATPase, I tried to embed the Ca2+-ATPase into small lipid-bilayer (nanodiscs) with various lipid components. The Ca2+-ATPase was successfully embedded into the nanodisc without loss of its activities and the Ca2+-ATPase-embedded nanodiscs were utilized for various analyses. Subsequently, the contributions of lipid environments on the enzymatic activities were estimated quantitively by systematic analyses and could be distinguished between components of electrostatic- and steric-interactions. Furthermore, the results indicated that surface charges, but not particular lipid-head group, directly modulate the functions of Ca2+-ATPase. This finding is possibly important for not only Ca2+-ATPase but also for other functional membrane proteins.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (22 results)

All 2017 2016 2015

All Journal Article (4 results) (of which Peer Reviewed: 4 results,  Open Access: 4 results,  Acknowledgement Compliant: 3 results) Presentation (18 results) (of which Int'l Joint Research: 3 results)

  • [Journal Article] Nanodisc-based kinetic assays reveal distinct effects of phospholipid headgroups on the phosphoenzyme transition of sarcoplasmic reticulum Ca2+-ATPase2017

    • Author(s)
      Yamasaki K, Daiho T, Danko S, Yasuda S, Suzuki H.
    • Journal Title

      Journal of Biological Chemistry

      Volume: 292 Issue: 49 Pages: 20218-20227

    • DOI

      10.1074/jbc.m117.816702

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Membrane Perturbation of ADP-insensitive Phosphoenzyme of Ca2+-ATPase Modifies Gathering of Transmembrane Helix M2 with Cytoplasmic Domains and Luminal Gating2017

    • Author(s)
      Stefania Danko, Kazuo Yamasaki1, Takashi Daiho1, and Hiroshi Suzuki
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 1-12

    • DOI

      10.1038/srep41172

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Glycine 105 as Pivot for a Critical Knee-like Joint between Cytoplasmic and Transmembrane Segments of Second Transmembrane Helix in Ca2+-ATPase2016

    • Author(s)
      Takashi Daiho1, Kazuo Yamasaki, Stefania Danko, and Hiroshi Suzuki
    • Journal Title

      The Journal of Biological Chemistry

      Volume: 291 Issue: 47 Pages: 24688-24701

    • DOI

      10.1074/jbc.m116.759704

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Assembly of a Tyr122 Hydrophobic Cluster in Sarcoplasmic Reticulum Ca2+-ATPase Synchronizes Ca2+ Affinity Reduction and Release with Phosphoenzyme Isomerization2015

    • Author(s)
      Yamasaki K., Daiho T., Danko S., and Suzuki H.
    • Journal Title

      Journal of Biological Chemistry

      Volume: 290 Issue: 46 Pages: 27868-27879

    • DOI

      10.1074/jbc.m115.693770

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] Effects of phospholipid's head groups on the properties of sarcoplasmic reticulum Ca2+-ATPase embedded in nanodisc2017

    • Author(s)
      K. Yamasaki, T. Daiho, S. Danko, S. Yasuda and H. Suzuki
    • Organizer
      The 15th Inthernational Conference on Na,K-ATPase and Related Transport ATPases
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Glycine 105 as Pivot for a Critical Knee-like Joint between Cytoplasmic and Transmembrane Segments of the Second Transmembrane Helix in Ca2+-ATPase2017

    • Author(s)
      Takashi Daiho, Kazuo Yamasaki, Stefania Danko and Hiroshi Suzuki
    • Organizer
      The 15th Inthernational Conference on Na,K-ATPase and Related Transport ATPases
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Membrane Perturbation of ADP-insensitive Phosphoenzyme of Ca2+-ATPase Modifies Gathering of Transmembrane Helix M2 with Cytoplasmic Domains and Luminal Gating2017

    • Author(s)
      S. DankoK. Yamasaki, T. Daiho, S. Yasuda and H. Suzuki
    • Organizer
      The 15th Inthernational Conference on Na,K-ATPase and Related Transport ATPases
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 筋小胞体カルシウムポンプ活性に対する脂質ヘッドグループ及び膜表面電荷の影響の解析2017

    • Author(s)
      山崎和生、 大保貴嗣、 Danko Stefania、安田 哲、 鈴木裕
    • Organizer
      日本生体エネルギー研究会 第43回討論会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 筋小胞体カルシウムポンプの反応に及ぼす界面活性剤の効果2017

    • Author(s)
      大保 貴嗣、山崎 和生、Danko Stefania、安田 哲、鈴木 裕
    • Organizer
      日本生体エネルギー研究会 第43回討論会
    • Related Report
      2017 Annual Research Report
  • [Presentation] フリッパーゼの反応機構解析2017

    • Author(s)
      安田 哲、山崎和生、 大保貴嗣、高津 宏之、申 惠媛、 Danko Stefania、 鈴木裕
    • Organizer
      日本生体エネルギー研究会 第43回討論会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ナノディスクに組み込んだ筋小胞体Ca2+-ATPaseの活性に対する膜表面電荷の影響2017

    • Author(s)
      山崎和生、 大保貴嗣、 Danko Stefania、安田 哲、 鈴木裕
    • Organizer
      生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] 筋小胞体カルシウムポンプの活性に対する界面活性剤の影響2017

    • Author(s)
      大保 貴嗣、山崎 和生、Danko Stefania、安田 哲、鈴木 裕
    • Organizer
      生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] フリッパーゼの生化学的反応機構の解析2017

    • Author(s)
      安田 哲、山崎和生、 大保貴嗣、高津 宏之、申 惠媛、 Danko Stefania、 鈴木裕
    • Organizer
      生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] Caポンプのエネルギー共役;M2-helix膜貫通部分(M2m)と細胞質部分(M2c)をつなぐGly105の柔軟性の機能2016

    • Author(s)
      大保 貴嗣、山崎和生、Stefania Danko、鈴木 裕
    • Organizer
      日本生体エネルギー研究会 第42回討論会
    • Place of Presentation
      名古屋
    • Year and Date
      2016-12-19
    • Related Report
      2016 Research-status Report
  • [Presentation] 脂質ヘッドグループが筋小胞体カルシウムポンプ活性に及ぼす影響―ナノディスク組み込み標品を用いて―2016

    • Author(s)
      山崎和生、大保貴嗣、Danko Stefania、鈴木裕
    • Organizer
      日本生体エネルギー研究会 第42回討論会
    • Place of Presentation
      名古屋
    • Year and Date
      2016-12-19
    • Related Report
      2016 Research-status Report
  • [Presentation] Membrane Perturbation of ADP-insensitive Phosphoenzyme of Ca2+-ATPase Modifies Gathering of Transmembrane Helix M2 with Cytoplasmic Domains and Luminal Gating2016

    • Author(s)
      Stefania Danko, Kazuo Yamasaki, Takashi Daiho, and Hiroshi Suzuki
    • Organizer
      日本生体エネルギー研究会 第42回討論会
    • Place of Presentation
      名古屋
    • Year and Date
      2016-12-19
    • Related Report
      2016 Research-status Report
  • [Presentation] ナノディスクに組み込んだ標品を用いた筋小胞体Ca2+-ATPaseのEP転換ステップに及ぼす脂質組成及びA23187の影響の解析2016

    • Author(s)
      山崎和生、大保貴嗣、Danko Stefania、鈴木裕
    • Organizer
      第89回日本生化学会大会
    • Place of Presentation
      仙台
    • Year and Date
      2016-09-25
    • Related Report
      2016 Research-status Report
  • [Presentation] 筋小胞体Ca2+ポンプM2ヘリックスの膜貫通部分と細胞質部分の連結領域:エネルギー共役における役割2016

    • Author(s)
      大保 貴嗣、山崎和生、Stefania Danko、鈴木 裕
    • Organizer
      第89回日本生化学会大会
    • Place of Presentation
      仙台
    • Year and Date
      2016-09-25
    • Related Report
      2016 Research-status Report
  • [Presentation] ナノディスクへ組み込んだ筋小胞体カルシウムポンプを用いたタンパク質―脂質相互作用の解析2015

    • Author(s)
      山崎 和生
    • Organizer
      日本生体エネルギー研究会 第41回討論会
    • Place of Presentation
      東京
    • Year and Date
      2015-12-22
    • Related Report
      2015 Research-status Report
  • [Presentation] 筋小胞体Ca2+ポンプのエネルギー共役におけるM2 ヘリックス膜貫通部分(M2m)と細胞質部分(M2cyt)の連結領域の役割2015

    • Author(s)
      大保 貴嗣
    • Organizer
      日本生体エネルギー研究会 第41回討論会
    • Place of Presentation
      東京
    • Year and Date
      2015-12-22
    • Related Report
      2015 Research-status Report
  • [Presentation] 筋小胞体Ca2+ポンプのエネルギー共役におけるM2ヘリックス膜貫通部分(M2m)と細胞質部分(M2cyt)の連結領域の役割2015

    • Author(s)
      大保 貴嗣
    • Organizer
      第88回日本生化学会第38回日本分子生物学会合同年会
    • Place of Presentation
      神戸
    • Year and Date
      2015-12-03
    • Related Report
      2015 Research-status Report
  • [Presentation] 筋小胞体Ca2+-ATPaseのEP転換ステップにおけるTyr122-Hydorophobic clusterの集合過程とエネルギー共役2015

    • Author(s)
      山崎 和生
    • Organizer
      第88回日本生化学会第38回日本分子生物学会合同年会
    • Place of Presentation
      神戸
    • Year and Date
      2015-12-02
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-03-29  

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