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Population genomics on the evolution of inbreeding in sexual subspecies of Cyrtomium falcatum

Research Project

Project/Area Number 15K07180
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Biodiversity/Systematics
Research InstitutionChiba University

Principal Investigator

Watano Yasuyuki  千葉大学, 大学院理学研究院, 教授 (70192820)

Research Collaborator Ebihara Atsushi  
Imai Ryosuke  
Matsumoto Sadamu  
Nagano Atsushi  
Takayama Koji  
Tezuka Ayumi  
Tsuda Yoshiaki  
Suyama Yoshihisa  
Project Period (FY) 2015-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2017: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords自殖 / 交配様式 / シダ植物 / SNP / 遺伝的多様性 / ボトルネック / RAD-seq / 連鎖地図 / 同型胞子シダ植物 / マイクロサテライト / MIG-seq
Outline of Final Research Achievements

Diploid sexual races of Cyrtomium falcatum exhibit mating system variation: two different types of sexual expression (gametangia formation) in gametophytes. Inference of population splitting using SNPs data suggested that mixed mating-subspecies littorale had been derived from obligate outcrossing-subspecies australe. Furtherrmore, both EBSP and Stairway plot detected a severe population bottleneck event during the Last Glacial Period in the subspecies littorale, indicating a clear association between evolution of selfing and population bottleneck. In order to map genetic loci responsible for sexual expression in gametophytes, we constructed a linkage map by using RAD-seq data of a gametophyte population from an artificial F1 hybrid between the two subspecies. Unfortunately, however, no significant QTL were detected for the two different types of sexual expression. This suggests that the difference of the sexual expression between two subspecies are governed by relatively many loci.

Academic Significance and Societal Importance of the Research Achievements

他殖から自殖への進化は、被子植物では経験的にも理論的にも多くの研究がなされている。同形胞子シダ植物の配偶体もまた雌雄同株であり、様々な交配様式を示す点でも被子植物と同じであるが、自殖の進化に関わる機構については大きく研究が遅れている。本研究ではオニヤブソテツの二倍体有性生殖型の亜種間での交配様式の変異について解析し、自殖型亜種が他殖型亜種から派生して生じた事、また自殖型亜種は、最終氷期に明確なボトルネックを経験した事を示した。シダ植物において自殖の進化と歴史的ボトルネックの相関が検出されたのは初めての事例であり、自殖の進化において基本的に被子植物と同じ機構が働いている可能性が示唆される。

Report

(5 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (3 results)

All 2017 2016

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (2 results)

  • [Journal Article] The Relationship between Mating System and Genetic Diversity in Diploid Sexual Populations of Cyrtomium falcatum in Japan2016

    • Author(s)
      Ryosuke Imai, Yoshiaki Tsuda, Sadamu Matsumoto, Atsushi Ebihara, Yasuyuki Watano
    • Journal Title

      PLoS ONE

      Volume: 11 Issue: 10 Pages: 1-17

    • DOI

      10.1371/journal.pone.0163683

    • NAID

      120007129286

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 2倍体オニヤブソテツの交配様式の進化2017

    • Author(s)
      今井亮介, 津田吉晃, 松本定, 海老原淳, 手塚 あゆみ, 永野 惇, 綿野泰行
    • Organizer
      第128回日本森林学会大会
    • Place of Presentation
      鹿児島大学郡元地区(鹿児島県鹿児島市)
    • Year and Date
      2017-03-26
    • Related Report
      2016 Research-status Report
  • [Presentation] ヒメオニヤブソテツとムニンオニヤブソテツの RAD シーケンスを用いた系統学的研究2016

    • Author(s)
      今井亮介, 松本定, 海老原淳, 津田吉晃, 手塚あゆみ, 永野 惇, 綿野泰行
    • Organizer
      日本植物分類学会
    • Place of Presentation
      富山大学五福キャンパス(富山県富山市)
    • Year and Date
      2016-03-06
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2020-03-30  

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