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The process of adaptive introgression in forest tree species.

Research Project

Project/Area Number 15K07489
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Forest science
Research InstitutionForest Research and Management Organization

Principal Investigator

Uchiyama Kentaro  国立研究開発法人森林研究・整備機構, 森林総合研究所, 主任研究員 等 (40501937)

Co-Investigator(Kenkyū-buntansha) 津山 幾太郎  国立研究開発法人森林研究・整備機構, 森林総合研究所, 主任研究員 等 (80725648)
Co-Investigator(Renkei-kenkyūsha) UENO Saneyoshi  国立研究開発法人森林研究・整備機構, 森林総合研究所, 主任研究員 (40414479)
Research Collaborator TSUMURA Yoshihiko  筑波大学, 生命環境系, 教授 (20353774)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2017: ¥520,000 (Direct Cost: ¥400,000、Indirect Cost: ¥120,000)
Fiscal Year 2016: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2015: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords浸透交雑 / モミ属 / RAD-seq / 潜在生育域 / ゲノムワイドSNP / Rad-seq
Outline of Final Research Achievements

We combine an extensive survey of the mitochondrial (mtDNA) and nuclear genomes in 42 populations of the three Japanese Abies species (A. firma, A. homolepis and A. veitchii) with species distribution modelling (SDM). From the Bayesian clustering analysis showed that the three species were clearly separated. On the other hand, mtDNA haplotypes of the four northern populations of A. firma were completely replaced by two major haplotypes of A. homolepis and A. veitchii. The neighbor-net analysis and SDM suggests that the mtDNA capture through historical introgression among species were occurred in each geographic region. We hypothesize that climatic-induced range shifts during the Pleistocene/Holocene may have played an important role in the observed patterns of introgression of these species.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (4 results)

All 2018 2016 2015

All Presentation (4 results) (of which Int'l Joint Research: 2 results,  Invited: 1 results)

  • [Presentation] Range shift and introgression of three Japanese Abies species : insights from genomic analysis and species distribution modelling.2018

    • Author(s)
      Kentaro Uchiyama
    • Organizer
      2017 International Symposium of Korean National Arboretum: Conifer
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Range shift and introgression of three Japanese Abies species : insights from microsatellite,mtDNA and species distribution modelling2016

    • Author(s)
      UCHIYAMA Kentaro, FUJII Sayaka, TSUYAMA Ikutaro, SUZUKI Setsuko, MORIGUCHI Yoshinari, KIMURA K Megumi, TSUMURA Yoshihiko
    • Organizer
      The 15th International Conference on Ecology and Silviculture of Fir
    • Place of Presentation
      北海道大学農学部(北海道札幌市)
    • Year and Date
      2016-09-21
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 樹木種のゲノムワイド解析に向けたマーカー整備2016

    • Author(s)
      内山憲太郎、加藤珠理、上野真義、鈴木節子、須貝杏子、松本麻子
    • Organizer
      第127回日本森林学会大会
    • Place of Presentation
      日本大学生物資源科学部(神奈川県藤沢市)
    • Year and Date
      2016-03-27
    • Related Report
      2015 Research-status Report
  • [Presentation] 森林樹木種における効率的なゲノムワイドマーカーの開発2015

    • Author(s)
      内山憲太郎、加藤珠理、上野真義、松本麻子
    • Organizer
      森林遺伝育種学会第4回大会
    • Place of Presentation
      東京大学農学部キャンパス           弥生講堂アネックス・セイホクギャラリー(東京都文京区弥生)
    • Year and Date
      2015-11-06
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-03-29  

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