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Creation of the analysis technique to visualize the dynamics of labile intermediates in phosphotransfer reactions

Research Project

Project/Area Number 15K07887
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Physical pharmacy
Research InstitutionHiroshima University

Principal Investigator

Kinoshita Emiko  広島大学, 医歯薬保健学研究科(薬), 助教 (40379912)

Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywordsphos-tag / チオリン酸化タンパク質 / ATPgammaS / リン酸化タンパク質 / Phos-tag / リン酸基 / チオリン酸基 / ATPgS / リン酸基転移反応 / 反応中間体 / Phos-tag SDS-PAGE / ATPγS
Outline of Final Research Achievements

Signal-transduction regulatory systems for certain cellular responses which rely on phosphorylation of histidine or aspartic acid have known in eukaryotic cells. Identification of site-specific phosphorylation dynamics of His or Asp is technically difficult because of the labile nature of the phosphorylated amino acid residues. ATPgammaS, which used as a phosphoryl donor to trace protein kinase activities, has the advantage of permitting study of His- or Asp phosphorylation, because the resulting thiophosphorylated substrates are resistant to chemical hydrolysis or the action of phosphatases. Using the phosphate affinity electrophoresis, Phos-tag SDS-PAGE, we separated thiophosphorylated substrate generated as a intermediate of kinase reaction,and studied the dynamics of the histidine kinase reactions.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (48 results)

All 2018 2017 2016 2015 Other

All Journal Article (11 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 10 results,  Open Access: 10 results,  Acknowledgement Compliant: 4 results) Presentation (32 results) (of which Int'l Joint Research: 3 results) Book (4 results) Remarks (1 results)

  • [Journal Article] Specific glutamic acid residues in targeted proteins induce exaggerated retardations in Phos-tag SDS-PAGE migration2017

    • Author(s)
      E.Kinoshita, E. Kinoshita-Kikuta, K. Karata, T. Kawano, A. Nishiyama, M. Yamato, and T. Koike
    • Journal Title

      Electrophoresis

      Volume: 38 Issue: 8 Pages: 1139-1146

    • DOI

      10.1002/elps.201600520

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] TAMRA/TAMRA fluorescence quenching systems for the activity assay of alkaline phosphatase2017

    • Author(s)
      A. Shiba, E. Kinoshita-Kikuta, E. Kinoshita, and Tohru Koike
    • Journal Title

      Sensors

      Volume: 17 Issue: 8 Pages: 1877-1888

    • DOI

      10.3390/s17081877

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Zn(II)-Phos-tag SDS-PAGE for Separation and Detection of a DNA Damage-Related Signaling Large Phosphoprotein2017

    • Author(s)
      Kinoshita E., Kinoshita-Kikuta E., Koike T.
    • Journal Title

      Methods and Protocols, Methods in Molecular Biology

      Volume: 1599 Pages: 113-126

    • DOI

      10.1007/978-1-4939-6955-5_9

    • ISBN
      9781493969531, 9781493969555
    • Related Report
      2017 Annual Research Report
  • [Journal Article] A novel thiol-affinity micropipette tip method using zinc(II)-cyclen-attached agarose beads for enrichment of cysteine-containing molecules.2016

    • Author(s)
      Kusamoto, H., Shiba, A., Koretake, N., Fujioka, H., Hieda, Y., Kinoshita-Kikuta, E., Kinoshita, E., Koike, T.
    • Journal Title

      J. Chromatogr. B. Analyt. Technol. Biomed. Life. Sci.

      Volume: 1031 Pages: 195-201

    • DOI

      10.1016/j.jchromb.2016.07.049

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] A Phos-tag SDS-PAGE method that effectively uses phosphoproteomic data for profiling the phosphorylation dynamics of MEK1.2016

    • Author(s)
      Kinoshita E, Kinoshita-Kikuta E, Kubota Y, Takekawa M and Koike T.
    • Journal Title

      Proteomics

      Volume: 16 Issue: 13 Pages: 1825-1836

    • DOI

      10.1002/pmic.201500494

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Phosphopeptide detection with biotin-labeled Phos-tag.2016

    • Author(s)
      Kinoshita-Kikuta, E., Kinoshita, E., and Koike, T.
    • Journal Title

      Methods and Protocols, Methods in Molecular Biology

      Volume: 1355 Pages: 17-29

    • DOI

      10.1007/978-1-4939-3049-4_2

    • ISBN
      9781493930487, 9781493930494
    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Validation of cis and trans modes in multistep phosphotransfer signaling of bacterial tripartite sensor kinases by using Phos- tag SDS- PAGE.2016

    • Author(s)
      Kinoshita- Kikuta, E., Eiji Kinoshita, Eguchi, Y., Koike, T.
    • Journal Title

      PLoS One

      Volume: 11 Issue: 2 Pages: e0148294-e0148294

    • DOI

      10.1371/journal.pone.0148294

    • Related Report
      2016 Research-status Report 2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Expression and phosphorylation state analysis of intracellular protein kinases using Multi- PK antibody and Phos- tag SDS- PAGE.2015

    • Author(s)
      Sugiyama, Y., Katayama, S., Kameshita, I., Morisawa, K., Higuchi, T., Todaka, H., Eiji Kinoshita, Kinoshita- Kikuta, E., Koike, T., Taniguchi, T., Sakamoto, S.
    • Journal Title

      MethodsX

      Volume: 2 Pages: 469-474

    • DOI

      10.1016/j.mex.2015.11.007

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The cutting edge of affinity electrophoresis technology2015

    • Author(s)
      Eiji Kinoshita, Kinoshita-Kikuta, E., and Koike, T.
    • Journal Title

      Proteomes

      Volume: 3 Issue: 1 Pages: 42-55

    • DOI

      10.3390/proteomes3010042

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Advances in Phos- tag- based methodologies for separation and detection of the phosphoproteome.2015

    • Author(s)
      Eiji Kinoshita, Kinoshita- Kikuta, E., and Koike, T.
    • Journal Title

      Biochim. Biophys. Acta

      Volume: 1854 Issue: 6 Pages: 601-618

    • DOI

      10.1016/j.bbapap.2014.10.004

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Phos-tag SDS-PAGEゲルからの標的リン酸化タンパク質の転写効率改善2015

    • Author(s)
      木下英司,木下恵美子,小池透
    • Journal Title

      分析化学

      Volume: 64 Pages: 501-509

    • NAID

      130005091793

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Phos-tag SDS-PAGEを用いたN-ミリストイル化依存的なタンパク質リン酸化反応の解析2018

    • Author(s)
      谷川 綾音,木下 恵美子,黄波戸 亜哉,守屋 康子,木下 英司,小池 透,内海 俊彦
    • Organizer
      日本農芸化学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 亜鉛酵素モデルに対するリガンドの親和性を解析する新規分光分析法の開発2018

    • Author(s)
      草本 寛,芝 晃生,常弘 昌弥,藤岡 晴人,木下 恵美子,木下 英司,小池 透
    • Organizer
      日本薬学会第138年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 蛍光クエンチングを用いるアルカリホスファターゼ分析の新規蛍光分析法の開発2018

    • Author(s)
      芝 晃生,木下 恵美子,木下 英司,小池 透
    • Organizer
      日本薬学会第138年会 金沢
    • Related Report
      2017 Annual Research Report
  • [Presentation] フォスタグ技術とプロテオミクス情報を活用した細胞内MEK1リン酸化ダイナミクスのプロファイリング2017

    • Author(s)
      木下英司,木下恵美子,小池透
    • Organizer
      第137回日本薬学会年会
    • Place of Presentation
      仙台市
    • Year and Date
      2017-03-24
    • Related Report
      2016 Research-status Report
  • [Presentation] タンパク質のリン酸化分子種全体を見える化するPhos-tag SDS-PAGE2017

    • Author(s)
      木下恵美子
    • Organizer
      日本プロテオーム学会2017年大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] プロテインキナーゼのリン酸化動態のプロファイリング法の開発2017

    • Author(s)
      上里裕樹,木下英司,木下恵美子,小池透,亀下勇,杉山康憲
    • Organizer
      2017年度生命科学系学会合同年会 ComBio2017
    • Related Report
      2017 Annual Research Report
  • [Presentation] Phos-tag SDS-PAGEを基盤としたin vitro キナーゼアッセイ法: 宿主細胞に由来する偽陽性のキナーゼ活性を見極める2017

    • Author(s)
      藤田萌々子,木下恵美子,木下英司,小池透
    • Organizer
      第68回日本電気泳動学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ハイブリッドヒスチジンキナーゼにおけるリン酸基転移反応様式の検証2017

    • Author(s)
      池上まどか,木下恵美子,木下英司,小池透
    • Organizer
      第68回日本電気泳動学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 細胞内情報伝達におけるMEK1リン酸化種の動態解析2017

    • Author(s)
      谷口翼,上田爽夏,石山美帆,木下恵美子,木下英司,小池透
    • Organizer
      第68回日本電気泳動学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Phos-tag SDS-PAGEの移動度に影響を及ぼすリン酸基以外の要因2017

    • Author(s)
      木下恵美子,山戸護久,西山敦洋,河野敏己,木下英司,小池透
    • Organizer
      第68回日本電気泳動学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] マルチPK抗体とPhos-tag 2D-PAGEを組み合わせたプロテインキナーゼのプロファイル法2017

    • Author(s)
      上里裕樹, 木下英司, 木下恵美子, 小池透,亀下勇, 杉山康憲
    • Organizer
      第68回日本電気泳動学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Phos-tagを基盤としたin vitro キナーゼアッセイ法:宿主細胞に由来する偽陽性のキナーゼ活性を見極める有効手段2017

    • Author(s)
      木下英司,木下恵美子,小池 透
    • Organizer
      2017年度生命科学系学会合同年会 ComBio2017
    • Related Report
      2017 Annual Research Report
  • [Presentation] フォスタグ技術とプロテオミクス情報を活用した細胞内MEK1リン酸化ダイナミクスのプロファイリング2016

    • Author(s)
      木下英司,木下恵美子,久保田裕二,武川睦寛,小池透
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      横浜市
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report
  • [Presentation] フォスタグ技術によるセンサーキナーゼの自己リン酸化制御機構の解析2016

    • Author(s)
      木下恵美子
    • Organizer
      第89回日本生化学大会
    • Place of Presentation
      仙台市
    • Year and Date
      2016-09-25
    • Related Report
      2016 Research-status Report
  • [Presentation] 大腸菌ハイブリッドセンサーキナーゼにおけるリン酸基転移反応様式の検証2016

    • Author(s)
      木下英司,木下恵美子,江口陽子,小池透
    • Organizer
      第89回日本生化学大会
    • Place of Presentation
      仙台市
    • Year and Date
      2016-09-25
    • Related Report
      2016 Research-status Report
  • [Presentation] Phos-tag SDS-PAGE methodology that effectively uses phosphoproteomic data for profiling the phosphorylation dynamics of MEK12016

    • Author(s)
      Eiji Kinoshita, Emiko Kinoshita-Kikuta, and Tohru Koike
    • Organizer
      15th Human Proteome Organization World Congress
    • Place of Presentation
      台北市(台湾)
    • Year and Date
      2016-09-18
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Phosphate-affinity chromatographic micro-tip technology for enrichment of phosphopeptides towards phosphoproteomic study,2016

    • Author(s)
      Maho Kawaguchi, Elena Tianfei Yuan, Yoko Ino, Yayoi Kimura, Hisashi Hirano, Emiko Kinoshita-Kikuta, Eiji Kinoshita, and Tohru Koike,
    • Organizer
      15th Human Proteome Organization World Congress
    • Place of Presentation
      台北市(台湾)
    • Year and Date
      2016-09-18
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Thio-tag tip method by using zinc(II)-cyclen-attached agarose beads for enrichment of cysteine-containing biomolecules2016

    • Author(s)
      Hiroshi Kusamoto, Akio Shiba, Norinao Koretake, Emiko Kinoshita-Kikuta, Eiji Kinoshita, Tohru Koike
    • Organizer
      15th Human Proteome Organization World Congress
    • Place of Presentation
      台北市(台湾)
    • Year and Date
      2016-09-18
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] チオール含有生体分子を分離・濃縮するためのThio-tag磁気ビーズの開発2016

    • Author(s)
      河口真歩,藤岡晴人,木下恵美子,木下英司,小池透
    • Organizer
      第67回日本電気泳動学会総会
    • Place of Presentation
      釧路市
    • Year and Date
      2016-08-26
    • Related Report
      2016 Research-status Report
  • [Presentation] Thio-tag Tipを用いたチオール基含有化合物の選択的分離精製法2016

    • Author(s)
      草本寛,藤岡晴人,芝晃生,是竹紀尚,木下恵美子,木下英司,小池透
    • Organizer
      第67回日本電気泳動学会総会
    • Place of Presentation
      釧路市
    • Year and Date
      2016-08-26
    • Related Report
      2016 Research-status Report
  • [Presentation] フォスタグ技術を用いたヒスチジンキナーゼにおける自己リン酸化ダイナミクスのプロファイリング2016

    • Author(s)
      木下英司,木下恵美子,小池透
    • Organizer
      日本プロテオーム学会2016年大会
    • Place of Presentation
      北里大学(東京都港区)
    • Year and Date
      2016-07-28
    • Related Report
      2016 Research-status Report
  • [Presentation] Thio-tag Tipを用いたチオール基含有化合物の選択的分離精製法2016

    • Author(s)
      草本 寛,芝 晃生,是竹 紀尚,木下恵美子,木下英司,小池透
    • Organizer
      日本プロテオーム学会2016年大会
    • Place of Presentation
      北里大学(東京都港区)
    • Year and Date
      2016-07-28
    • Related Report
      2016 Research-status Report
  • [Presentation] ハイブリッドセンサーキナーゼにおけるリン酸基転移反応の制御機構 ~レシーバードメインによるリン 酸化レベルの負の制御機能~2016

    • Author(s)
      木下英司,木下恵美子,小池透
    • Organizer
      日本薬学会第136年会
    • Place of Presentation
      横浜市
    • Year and Date
      2016-03-26
    • Related Report
      2015 Research-status Report
  • [Presentation] Phos- tag SDS- PAGEを用いたリン酸化阻害物質の探索2016

    • Author(s)
      曽根雄太郎,山野喜,志賀もえみ,杉本幸子,木下英司,木下恵美子,小池 透,大塚英昭,松浪勝義
    • Organizer
      日本薬学会第136年会
    • Place of Presentation
      横浜市
    • Year and Date
      2016-03-26
    • Related Report
      2015 Research-status Report
  • [Presentation] Thio- tag Tipを用いたチオール基含有化合物の選択的分離精製法2016

    • Author(s)
      草本寛,藤岡晴人,是竹紀尚,木下恵美子,木下英司,小池透
    • Organizer
      日本薬学会第136年会
    • Place of Presentation
      横浜市
    • Year and Date
      2016-03-26
    • Related Report
      2015 Research-status Report
  • [Presentation] Developmento of Tio-tag magnetic, bead for rapid and selective separation of thiol-containing biomolecules.2015

    • Author(s)
      Maho Kawaguchi, Norinao Koretake, Emiko Kinoshita- Kikuta, Eiji Kinoshita, and Tohru Koike
    • Organizer
      Pacifichem2015(国際学会)
    • Place of Presentation
      ホノルル市(USA)
    • Year and Date
      2015-12-15
    • Related Report
      2015 Research-status Report
  • [Presentation] ハイブリッドセンサーキナーゼのリン酸機リレー情報伝達機構におけるレシーバードメインの制御機構2015

    • Author(s)
      木下恵美子,木下英司, 江口陽,吉多美祐,山本兼由,内海龍太郎,小池透
    • Organizer
      BMB2015
    • Place of Presentation
      神戸市
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report
  • [Presentation] Phos- tag SDS- PAGEゲルからの標的リン酸化タンパク質の転写効率の改善2015

    • Author(s)
      木下英司、草本寛、木下恵美子、小池透
    • Organizer
      日本電気泳動学会第66回総会
    • Place of Presentation
      東京
    • Year and Date
      2015-09-04
    • Related Report
      2015 Research-status Report
  • [Presentation] リン酸基捕捉能を持つダーククエンチャーを用いた蛍光分析法2015

    • Author(s)
      國貞夏実、木下恵美子、木下英司、小池透
    • Organizer
      日本電気泳動学会第66回総会
    • Place of Presentation
      東京
    • Year and Date
      2015-09-04
    • Related Report
      2015 Research-status Report
  • [Presentation] 迅速かつ簡便にリン酸化生体分子を分離精製するためのPhos-tag Tipの開発2015

    • Author(s)
      河口真歩、井野洋子、木村弥生、平野久、木下恵美子、木下英司、小池透
    • Organizer
      日本電気泳動学会第66回総会
    • Place of Presentation
      東京
    • Year and Date
      2015-09-04
    • Related Report
      2015 Research-status Report
  • [Presentation] Phos-tagビーズを用いたゲル内消化産物からのリン酸化ペプチド濃縮2015

    • Author(s)
      井野洋子、木下英司、木下恵美子、小池透,戸田年総,平野久,木村弥生
    • Organizer
      日本電気泳動学会第66回総会
    • Place of Presentation
      東京
    • Year and Date
      2015-09-04
    • Related Report
      2015 Research-status Report
  • [Presentation] Phos-tag tip, a novel tool for phosphoproteome study2015

    • Author(s)
      EIji Kinoshita, Emiko Kinoshita-Kikuta, Yoko Ino, Yayoi Kimura, Hisashi Hirano, Thoru Koike
    • Organizer
      日本プロテオーム学会2015年大会
    • Place of Presentation
      熊本市
    • Year and Date
      2015-07-23
    • Related Report
      2015 Research-status Report
  • [Book] Phosphopeptide detection with biotin- labeled Phos- tag, in Phospho- proteomics: Methods and Protocols, Methods in Molecular Biology, 13552016

    • Author(s)
      Kinoshita- Kikuta, E., Eiji Kinoshita, and Koike, T.
    • Total Pages
      13
    • Publisher
      Springer
    • Related Report
      2015 Research-status Report
  • [Book] Neutral phosphate affinity SDS- PAGE system for profiling of protein phosphorylation, in Proteomic Profiling: Methods and Protocols,Methods in Molecular Biology, 12952015

    • Author(s)
      Kinoshita- Kikuta, E., Eiji Kinoshita, and Koike, T.
    • Total Pages
      32
    • Publisher
      Springer
    • Related Report
      2015 Research-status Report
  • [Book] Phis-Tag based affinity chromatography techniques for enrichment of the phosphoproteome, in Protein Modifications in Pathogenic Dysregulation of Signaling.2015

    • Author(s)
      Eiji Kinoshita,Kinoshita- Kikuta, E.,and Koike, T.
    • Total Pages
      14
    • Publisher
      Springer
    • Related Report
      2015 Research-status Report
  • [Book] Phos- tag technology for kinomics, in Kinomics: Approaches and Applications.2015

    • Author(s)
      Kinoshita- Kikuta, E., Eiji Kinoshita, and Koike, T.
    • Total Pages
      16
    • Publisher
      Wiley- VCH
    • Related Report
      2015 Research-status Report
  • [Remarks] Phos-tag.com

    • URL

      http://www.phos-tag.com

    • Related Report
      2016 Research-status Report

URL: 

Published: 2015-04-16   Modified: 2019-03-29  

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