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Establishment and applications of an entirely plasmid-based reverse genetics system

Research Project

Project/Area Number 15K08505
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Virology
Research InstitutionFujita Health University

Principal Investigator

Komoto Satoshi  藤田医科大学, 医学部, 准教授 (60367711)

Project Period (FY) 2015-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2017: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2015: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywordsロタウイルス / リバースジェネティクス / 11-plasmid system / NSP2, NSP5 / ヒトロタウイルスの人工合成 / NSP2とNSP5をコードするプラスミド量
Outline of Final Research Achievements

Reverse genetics is a powerful tool for studying virus replication and pathogenicity and also for vaccine development. We succeeded to develop an entirely plasmid-based reverse genetics system based on the transfection of 14 plasmids (11 rotavirus cDNAs in combination with three helper expression plasmids derived from other viruses). We recently developed an optimized reverse genetics system based on only rotavirus cDNAs (11-plasmid system), in which the concentration of cDNA plasmids containing NSP2 and NSP5 genes is 3- or 5-fold increased in relation to that of the other plasmids. In addition to infectious recombinant rotaviruses expressing fluorescent proteins (EGFP and mCherry), authentic human rotavirus (strain KU (G1P[8])) was also generated with the 11-plasmid system.

Academic Significance and Societal Importance of the Research Achievements

本技術は、生体における安全性がいまだ確認されていない、動物ウイルス由来蛋白質等を用いることなく、ロタウイルスの人工合成を可能とするので、ロタウイルス増殖機序や病原性発現機構の解明といった基礎研究のみならず、安全性に優れた、次世代ワクチン、新規な腸管細胞への外来遺伝子の伝達技術の開発といった臨床応用での有用性につながる。この新規の手法では、ロタウイルスゲノムをコードする11本のプラスミドを用いるのみであり、簡便かつ安全であり、高効率である点など、実用性の高い手法である。

Report

(5 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (29 results)

All 2019 2018 2017 2016 2015

All Journal Article (20 results) (of which Int'l Joint Research: 13 results,  Peer Reviewed: 20 results,  Open Access: 12 results,  Acknowledgement Compliant: 8 results) Presentation (9 results) (of which Invited: 1 results)

  • [Journal Article] Generation of infectious recombinant human rotaviruses from just 11 cloned cDNAs encoding the rotavirus genome2019

    • Author(s)
      Komoto S, Fukuda S, Kugita M, Hatazawa R, Koyama C, Katayama K, Murata T, Taniguchi K.
    • Journal Title

      J Virol.

      Volume: 93(8) Issue: 8

    • DOI

      10.1128/jvi.02207-18

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Generation of recombinant rotaviruses expressing fluorescent proteins using an optimized reverse genetics system2018

    • Author(s)
      Komoto S, Fukuda S, Ide T, Ito N, Sugiyama M, Yoshikawa T, Murata T, Taniguchi K.
    • Journal Title

      J Virol

      Volume: Epub ahead of print Issue: 13

    • DOI

      10.1128/jvi.00588-18

    • Related Report
      2018 Annual Research Report 2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Reverse Genetics System Demonstrates that Rotavirus Nonstructural Protein NSP6 Is Not Essential for Viral Replication in Cell Culture2017

    • Author(s)
      Komoto S, Kanai Y, Fukuda S, Kugita M, Kawagishi T, Ito N, Sugiyama M, Matsuura Y, Kobayashi T, Taniguchi K.
    • Journal Title

      J Virol

      Volume: 91(21) Issue: 21

    • DOI

      10.1128/jvi.00695-17

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Identification and characterization of a human G9P[23] rotavirus strain from a child with diarrhoea in Thailand: evidence for porcine-to-human interspecies transmission2017

    • Author(s)
      Komoto S, Tacharoenmuang R, Guntapong R, Ide T, Sinchai P, Upachai S, Fukuda S, Yoshikawa T, Tharmaphornpilas P, Sangkitporn S, Taniguchi K.
    • Journal Title

      J Gen Virol

      Volume: Epub ahead of print Issue: 4 Pages: 532-538

    • DOI

      10.1099/jgv.0.000722

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Oral administration of Bifidobacterium bifidum G9-1 alleviates rotavirus gastroenteritis through regulation of intestinal homeostasis by inducing mucosal protective factors2017

    • Author(s)
      Kawahara T, Makizaki Y, Oikawa Y, Tanaka Y, Maeda A, Shimakawa M, Komoto S, Moriguchi K, Ohno H, Taniguchi K
    • Journal Title

      PLoS One

      Volume: 12(3) Issue: 3 Pages: 1-22

    • DOI

      10.1371/journal.pone.0173979

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Burden of Rotavirus and Enteric Bacterial Pathogens among Children under 5 Years of Age Hospitalized with Diarrhea in Suburban and Rural Areas in Kenya2017

    • Author(s)
      Shah M, Odoyo E, Wandera EA, Bundi M, Miringu G, Guyo S, Kathiiko C, Galata A, Komoto S, Nyangao J, Karama M, Tsuji T, Taniguchi K, Morita K, Ichinose Y
    • Journal Title

      Japanese Journal of Infectious Diseases

      Volume: 70 Issue: 4 Pages: 442-447

    • DOI

      10.7883/yoken.JJID.2016.398

    • NAID

      130005851917

    • ISSN
      1344-6304, 1884-2836
    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Entirely plasmid-based reverse genetics system for rotaviruses2017

    • Author(s)
      Kanai Y, Komoto S, Kawagishi T, Nouda R, Nagasawa N, Onishi M, Matsuura Y, Taniguchi K, Kobayashi T.
    • Journal Title

      Proc Natl Acad Sci U S A

      Volume: 114 Issue: 9 Pages: 2349-2354

    • DOI

      10.1073/pnas.1618424114

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Rotavirus vaccine strain transmission by vaccinated infants in the foster home2017

    • Author(s)
      Miura H, Kawamura Y, Sugata K, Koshiyama N, Yoshikawa A, Komoto S, Taniguchi K, Ihira M, Yoshikawa T
    • Journal Title

      J Med Virol

      Volume: 89(1) Issue: 1 Pages: 79-84

    • DOI

      10.1002/jmv.24613

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] redominant prevalence of human rotaviruses with the G1P[8] and G8P[8] genotypes with a short RNA profile in 2013 and 2014 in Sukhothai and Phetchaboon provinces, Thailand.2017

    • Author(s)
      Guntapong R, Tacharoenmuang R, Singchai P, Upachai S, Sutthiwarakom K, Komoto S, Tsuji T, Tharmaphornpilas P, Yoshikawa T, Sangkitporn S, Taniguchi K.
    • Journal Title

      J Med Virol.

      Volume: 89 Issue: 4 Pages: 615-620

    • DOI

      10.1002/jmv.24669

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Monthly Distribution of Norovirus and Sapovirus Causing Viral Gastroenteritis in Thailand2017

    • Author(s)
      Pongsuwanna Y, Tacharoenmuang R, Prapanpoj M, Sakon N, Komoto S, Guntapong R, Taniguchi K.
    • Journal Title

      Japanese Journal of Infectious Diseases

      Volume: 70 Issue: 1 Pages: 84-86

    • DOI

      10.7883/yoken.JJID.2015.440

    • NAID

      130005296280

    • ISSN
      1344-6304, 1884-2836
    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Full Genome Characterization of Novel DS-1-Like G8P[8] Rotavirus Strains that Have Emerged in Thailand: Reassortment of Bovine and Human Rotavirus Gene Segments in Emerging DS-1-Like Intergenogroup Reassortant Strains2016

    • Author(s)
      Tacharoenmuang R, Komoto S, Guntapong R, Ide T, Sinchai P, Upachai S, Yoshikawa T, Tharmaphornpilas P, Sangkitporn S, Taniguchi K
    • Journal Title

      PLoS One

      Volume: 11(11) Issue: 11 Pages: e0165826-e0165826

    • DOI

      10.1371/journal.pone.0165826

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Whole genomic analysis of bovine group A rotavirus strains A5-10 and A5-13 provides evidence for close evolutionary relationship with human rotaviruses2016

    • Author(s)
      Komoto S, Pongsuwanna Y, Tacharoenmuang R, Guntapong R, Ide T, Higo-Moriguchi K, Tsuji T, Yoshikawa T, Taniguchi K
    • Journal Title

      Vet Microbiol

      Volume: 195 Pages: 37-57

    • DOI

      10.1016/j.vetmic.2016.09.003

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Molecular Epidemiology of Rotavirus Gastroenteritis in Central Kenya Before Vaccine Introduction2016

    • Author(s)
      Ernest A. Wandera, Shah Mohammad, Satoshi Komoto, Yoshimasa Maeno, James Nyangao, Tomihiko Ide, Cyrus Kathiiko, Erick Odoyo, Takao Tsuji, Koki Taniguchi,* and Yoshio Ichinose
    • Journal Title

      Journal of Medical Virology

      Volume: 89 Issue: 5 Pages: 809-817

    • DOI

      10.1002/jmv.24691

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Whole genome sequences of Japanese porcine species C rotaviruses reveal a high diversity of genotypes of individual genes and will contribute to a comprehensive, generally accepted classification system2016

    • Author(s)
      Niira K, Ito M, Masuda T, Saitou T, Abe T, Komoto S, Sato M, Yamasato H, Kishimoto M, Naoi Y, Sano K, Tuchiaka S, Okada T, Omatsu T, Furuya T, Aoki H, Katayama Y, Oba M, Shirai J, Taniguchi K, Mizutani T, Nagai M
    • Journal Title

      Infect Genet Evol

      Volume: 44 Pages: 106-13

    • DOI

      10.1016/j.meegid.2016.06.041

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Whole genomic analysis of human and bovine G8P[1] rotavirus strains isolated in Nigeria provides evidence for direct bovine-to-human interspecies transmission2016

    • Author(s)
      Komoto S, Adah MI, Ide T, Yoshikawa T, Taniguchi K
    • Journal Title

      Infect Genet Evol

      Volume: 43 Pages: 424-33

    • DOI

      10.1016/j.meegid.2016.06.023

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Reassortment of Human and Animal Rotavirus Gene Segments in Emerging DS-1-Like G1P[8] Rotavirus Strains2016

    • Author(s)
      Komoto S, Tacharoenmuang R, Guntapong R, Ide T, Tsuji T, Yoshikawa T, Tharmaphornpilas P, Sangkitporn S, Taniguchi K.
    • Journal Title

      PLoS One

      Volume: 11(2) Issue: 2 Pages: e0148416-e0148416

    • DOI

      10.1371/journal.pone.0148416

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] High Prevalence of G12 Human Rotaviruses in Children with Gastroenteritis in Myanmar2016

    • Author(s)
      Ide T, Higo-Moriguchi K, Komoto S, Htun KW, Myint YY, Myat TW, Thant KZ, Thu HM, Win MM, Oo HN, Htut T, Rahman S, Nguyen SV, Umeda K, Oguma K, Tsuji T, Taniguchi K.
    • Journal Title

      Japanese Journal of Infectious Diseases

      Volume: 69 Issue: 4 Pages: 326-327

    • DOI

      10.7883/yoken.JJID.2015.267

    • NAID

      130005165482

    • ISSN
      1344-6304, 1884-2836
    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Emergence and Characterization of Unusual DS-1-Like G1P[8] Rotavirus Strains in Children with Diarrhea in Thailand2015

    • Author(s)
      Komoto S, Tacharoenmuang R, Guntapong R, Ide T, Haga K, Katayama K, Kato T, Ouchi Y, Kurahashi H, Tsuji T, Sangkitporn S, Taniguchi K.
    • Journal Title

      PLoS One

      Volume: 10(11) Issue: 11 Pages: 1-22

    • DOI

      10.1371/journal.pone.0141739

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Whole Genomic Analysis of an Unusual Human G6P[14] Rotavirus Strain Isolated from a Child with Diarrhea in Thailand: Evidence for Bovine-To-Human Interspecies Transmission and Reassortment Events2015

    • Author(s)
      Tacharoenmuang R, Komoto S, Guntapong R, Ide T, Haga K, Katayama K, Kato T, Ouchi Y, Kurahashi H, Tsuji T, Sangkitporn S, Taniguchi K.
    • Journal Title

      PLoS One

      Volume: 10(9) Issue: 9 Pages: 1-23

    • DOI

      10.1371/journal.pone.0139381

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Whole genomic analysis of human G12P[6] and G12P[8] rotavirus strains that have emerged in Myanmar.2015

    • Author(s)
      Ide T, Komoto S, Higo-Moriguchi K, Htun KW, Myint YY, Myat TW, Thant KZ, Thu HM, Win MM, Oo HN, Htut T, Wakuda M, Dennis FE, Haga K, Fujii Y, Katayama K, Rahman S, Nguyen SV, Umeda K, Oguma K, Tsuji T, Taniguchi K.
    • Journal Title

      PLoS ONE

      Volume: 10 Issue: 5 Pages: 1-24

    • DOI

      10.1371/journal.pone.0124965

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Development of efficient and simple reverse genetics system based on only rotavirus cDNAs2018

    • Author(s)
      Fukuda S, Ide T, Ito N, Sugiyama M, Yoshikawa T, Murata T, Taniguchi K, Komoto S.
    • Organizer
      第66回日本ウイルス学会学術集会
    • Related Report
      2018 Annual Research Report
  • [Presentation] ロタウイルスのリバースジェネティクス2017

    • Author(s)
      河本聡志
    • Organizer
      ウイルス性下痢症研究会第29回学術集会
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] Rotavirus non-structural protein NSP6 is not essential for viral replication in cell culture2017

    • Author(s)
      Fukuda S, Komoto S, Kanai Y, Kugita M, Kawagishi T, Ide T, Ito N, Sugiyama M, Matsuura Y, Kabayashi T, Taniguchi K.
    • Organizer
      第65回日本ウイルス学会学術集会
    • Related Report
      2017 Research-status Report
  • [Presentation] Generation of recombinant monoreassortant rotaviruses having human strain-derived gene segments2017

    • Author(s)
      Komoto S, Fukuda S, Ide T, Kanai Y, Kawagishi T, Matsuura Y, Kobayashi T, Taniguchi K.
    • Organizer
      第65回日本ウイルス学会学術集会
    • Related Report
      2017 Research-status Report
  • [Presentation] Emergence of unusual DS-1-like G8P[8] rotavirus strains in Thailand2016

    • Author(s)
      Satoshi Komoto, Tomihiko Ide, Ratana Tacharoenmuang, Ratigorn Guntapong, Saori Fukuda, Takao Tsuji, Tetsushi Yoshikawa, Piyanit Tharmaphornpilas, Somchai Sangkitporn, Koki Taniguchi
    • Organizer
      第64回日本ウイルス学会学術集会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2016-10-23
    • Related Report
      2016 Research-status Report
  • [Presentation] Full genomic analysis of Nigerian human and bovine G8P[1] rotairuses provides evidence for direct bovine-to-human interspecies transmission2016

    • Author(s)
      Tomihiko Ide, Satoshi Komoto, Adah Mohammed Ignatius, Saori Fukuda, Koki Taniguchi
    • Organizer
      第64回日本ウイルス学会学術集会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2016-10-23
    • Related Report
      2016 Research-status Report
  • [Presentation] Oral administration of Bifidobacterium bifidum G9-1 alleviates rotavirus gastroenteritis in sucking mice2016

    • Author(s)
      Tomohiro Kawahara, Yutaka Makizaki, Yosuke Oikawa, Yoshiki Tanaka, Masaki Shimakawa, Satoshi Komoto, Kyoko Moriguchi, Hiroshi Ohno, Koki Taniguchi
    • Organizer
      第64回日本ウイルス学会学術集会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2016-10-23
    • Related Report
      2016 Research-status Report
  • [Presentation] Rotavirus genomic rearrangement impairs packaging efficiency into progeny viruses despite does not confer growth disadvantage to viruses2015

    • Author(s)
      Satoshi Komoto, Tomihiko Ide, Koki Taniguchi.
    • Organizer
      第63回日本ウイルス学会学術集会
    • Place of Presentation
      福岡国際会議場
    • Year and Date
      2015-11-22
    • Related Report
      2015 Research-status Report
  • [Presentation] Characterization of an unusual human G6P[14] rotavirus strain identified from a child with diarrhea in Thailand2015

    • Author(s)
      Tomihiko Ide, Satoshi Komoto, Kei Haga, Kazuhiko Katayama, Takao Tsuji, Koki Taniguchi.
    • Organizer
      第63回日本ウイルス学会学術集会
    • Place of Presentation
      福岡国際会議場
    • Year and Date
      2015-11-22
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2020-03-30  

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