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Development of immunocomplex pretreatment method for mass spectrometry (MS, Immuno-MS) which is applicable to clinical testing

Research Project

Project/Area Number 15K08611
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Laboratory medicine
Research InstitutionChiba University

Principal Investigator

Nishimura Motoi  千葉大学, 医学部附属病院, 講師 (80400969)

Co-Investigator(Kenkyū-buntansha) 佐藤 守  千葉大学, 医学部附属病院, 特任准教授 (20401002)
Co-Investigator(Renkei-kenkyūsha) KODERA Yoshio  北里大学, 理学部, 准教授 (60265733)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2017: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2016: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2015: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywords質量分析 / ビタミンD / 細菌同定 / 病態検査学 / 臨床検査 / ペプチドミクス / プロテオミクス / 臨床検査医学 / イムノアッセイ
Outline of Final Research Achievements

Pretreatment methods for mass spectrometry to separate and measure antigen (peptide / protein) from immunocomplex without LC (liquid chromatography) was studied. Specifically, denaturation treatment and ultrafiltration were carried out to separate antigens. Even if MALDI-MS (mass spectrometry by matrix assisted laser desorption / ionization method) ,which is relatively resistant to contaminants in samples is used, it is difficult to obtain sufficient reproducibility for detection data when deviating from the ideal condition.
We further conducted mass spectrometry research on tumor secretion, liver disease marker, vitamin D metabolite etc. and published peer reviewed studies. In MALDI - MS in the bacterial identification test of blood culture specimens, good results of clinical examination level were obtained by pretreatment method not dependent on LC by using special polymer.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (32 results)

All 2018 2017 2016 2015

All Journal Article (18 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 16 results,  Open Access: 14 results,  Acknowledgement Compliant: 1 results) Presentation (14 results) (of which Int'l Joint Research: 4 results,  Invited: 2 results)

  • [Journal Article] Assessing the accuracy of variant detection in cost-effective gene panel testing by next-generation sequencing2018

    • Author(s)
      Fujiki R, Yoshida A, Ohara O, Morisaki H, Nishimura M, Ichikawa T, Morisaki T, YAO Y, Tanaka T, Matsushita K, Ikeda M, Maeda A.
    • Journal Title

      The Journal of Molecular Diagnostics

      Volume: in press

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Assessment by Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry of the Effects of Preanalytical Variables on Serum Peptidome Profiles Following Long-Term Sample Storage.2018

    • Author(s)
      Tsuchida S, Satoh M, Umemura H, Sogawa K, Takiwaki M, Ishige T, Miyabayashi Y, Iwasawa Y, Kobayashi S, Beppu M, Nishimura M, Kodera Y, Matsushita K, Nomura F
    • Journal Title

      Proteomics. Clinical applications

      Volume: 15 Issue: 3 Pages: 47-53

    • DOI

      10.1002/prca.201700047

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Variant in C-terminal region of intestinal alkaline phosphatase associated with benign familial hyperphosphatasaemia.2018

    • Author(s)
      Ishige T, Itoga S, Utsuno E, Nishimura M, Yoshikawa M, Kato N, Matsushita K, Yokosuka O, Nomura F
    • Journal Title

      Journal of medical genetics

      Volume: 10 Issue: 10 Pages: 47-53

    • DOI

      10.1136/jmedgenet-2017-104964

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Surveillance evaluation of the standardization of assay values for serum total 25-hydroxyvitamin D concentration in Japan.2018

    • Author(s)
      Ihara H, Kiuchi S, Ishige T, Nishimura M, Matsushita K, Satoh M, Nomura F, Yamashita M, Kitajima I, Tsugawa N, Okano T, Hirota K, Miura M, Totani M, Hashizume N; Nutrition Division, Japan Society of Clinical Chemistry.
    • Journal Title

      Ann Clin Biochem.

      Volume: Epub ahead of print Issue: 6 Pages: 0-0

    • DOI

      10.1177/0004563218765570

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Improved sensitivity of serum/plasma 1α,25-dihydroxyvitamin D quantification by DAPTAD derivatization2017

    • Author(s)
      Ishige Takayuki, Satoh Mamoru, Ogawa Shoujiro, Nishimura Motoi, Matsushita Kazuyuki, Higashi Tatsuya, Nomura Fumio
    • Journal Title

      Clinica Chimica Acta

      Volume: 473 Pages: 173-179

    • DOI

      10.1016/j.cca.2017.08.033

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Applications of copolymer for rapid identification of bacteria in blood culture broths using matrix-assisted laser desorption ionization time-of-flight mass spectrometry.2017

    • Author(s)
      Ashizawa K, Murata S, Terada T, Ito D, Bunya M, Watanabe K, Teruuchi Y, Tsuchida S, Satoh M, Nishimura M, Matsushita K, Sugama Y, Nomura F
    • Journal Title

      Journal of microbiological methods

      Volume: 139 Pages: 54-60

    • DOI

      10.1016/j.mimet.2017.04.013

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A novel KCNQ1 nonsense variant in the isoform-specific first exon causes both jervell and Lange-Nielsen syndrome 1 and long QT syndrome 1: a case report.2017

    • Author(s)
      Nishimura M, Ueda M, Ebata R, Utsuno E, Ishii T, Matsushita K, Ohara O, Shimojo N, Kobayashi Y, Nomura F
    • Journal Title

      BMC medical genetics

      Volume: 18 Issue: 1 Pages: 66-71

    • DOI

      10.1186/s12881-017-0430-7

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Rapid and cost-effective high-throughput sequencing for identification of germline mutations of BRCA1 and BRCA22017

    • Author(s)
      Ahmadloo S, Nakaoka H, Hayano T, Hosomichi K, You H, Utsuno E, Sangai T, Nishimura M, Matsushita K, Hata A, Nomura F, Inoue I
    • Journal Title

      J Hum Genetics

      Volume: 印刷中 Issue: 5 Pages: 561-567

    • DOI

      10.1038/jhg.2017.5

    • NAID

      40021210379

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Serum cytokine and chemokine profiles in patients with juvenile muscular atrophy of distal upper extremity (Hirayama disease).2017

    • Author(s)
      Beppu M, Sawai S, Misawa S, Mori M, Ito S, Sogawa K, Nishimura M, Matsushita K, Nomura F, Kuwabara S.
    • Journal Title

      J Neuroimmunol

      Volume: 302 Pages: 20-22

    • DOI

      10.1016/j.jneuroim.2016.11.011

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Development and validation of the simultaneous measurement of four vitamin D metabolites in serum by LC-MS/MS for clinical laboratory applications2016

    • Author(s)
      Mamoru Satoh, Takayuki Ishige, Shoujiro Ogawa, Motoi Nishimura, Kazuyuki Matsushita, Tatsuya Higashi, Fumio Nomura
    • Journal Title

      Anal Bioanal Chem

      Volume: 408 Issue: 27 Pages: 7617-7627

    • DOI

      10.1007/s00216-016-9821-4

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Combined Secretomics and Transcriptomics Revealed Cancer-Derived GDF15 is Involved in Diffuse-Type Gastric Cancer Progression and Fibroblast Activation.2016

    • Author(s)
      Ishige T, Nishimura M, Satoh M, Fujimoto M, Fukuyo M, Semba T, Kado S, Tsuchida S, Sawai S, Matsushita K, Togawa A, Matsubara H, Kaneda A, Nomura F
    • Journal Title

      Sci Rep.

      Volume: 6 Issue: 1 Pages: 21681-21681

    • DOI

      10.1038/srep21681

    • Related Report
      2016 Research-status Report 2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Coupling CDH17 and CLDN18 markers for comprehensive membrane-targeted detection of human gastric cancer.2016

    • Author(s)
      Matsusaka K, Ushiku T, Urabe M, Fukuyo M, Abe H, Ishikawa S, Seto Y, Aburatani H, Hamakubo T, Kaneda A, Fukayama M.
    • Journal Title

      Oncotarget

      Volume: 7 Issue: 51 Pages: 64168-64181

    • DOI

      10.18632/oncotarget.11510

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Fibrinogen alpha C chain 5.9 kDa fragment (FIC5.9), a biomarker for various pathological conditions, is produced in post-blood collection by fibrinolysis and coagulation factors2016

    • Author(s)
      Kikuchi W, Nishimura M, Kuga T, Tsuchida S, Saito T, Satoh M, Noda K, Kodera Y, Tomonaga T, Nomura F
    • Journal Title

      Clinical Proteomics

      Volume: 13 Issue: 1 Pages: 27-27

    • DOI

      10.1186/s12014-016-9129-6

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Familial lamin A/C mutation cardiomyopathy with arrhythmia substrate detected by cardiac magnetic resonance imaging and electroanatomical mapping.2016

    • Author(s)
      Nishi T, Takaoka H, Funabashi N, Nishimura M, Ohara O, Makiyama T, Ueda M, Kajiyama T, Kobayashi Y.
    • Journal Title

      International Journal of Cardiology

      Volume: 209 Pages: 248-252

    • DOI

      10.1016/j.ijcard.2016.02.030

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Detection of Ubiquitinated Dermcidin in Gingival Crevicular Fluid in Periodontal Disease2015

    • Author(s)
      Sachio Tsuchida , Mamoru Satoh, Masaki Takiwaki, Michiru Wakabayashi, Takayuki Ishige, Minako Beppu, Motoi Nishimura, Kazuyuki Matsushita, Fumio Nomura
    • Journal Title

      International Journal of Peptide Research and Therapeutics

      Volume: 1 Pages: 1-5

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Identification of Nocardia species using matrix-assisted laser desorption/ionization–time-of-flight mass spectrometry2015

    • Author(s)
      Segawa S, Nishimura M, Sogawa K, Tsuchida S, Murata S, Watanabe M, Matsushita K, Kamei K and Nomura F.
    • Journal Title

      Clinical Proteomics

      Volume: 12 Issue: 1 Pages: 1-1

    • DOI

      10.1186/s12014-015-9078-5

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Assessment of Vitamin D Metabolism by LC-MS/MS2015

    • Author(s)
      Ishige T, Satoh M, Ogawa S, Nishimura M, Higashi T, Nomura F.
    • Journal Title

      Rinsho Byori.

      Volume: 63 Pages: 457-464

    • NAID

      40020474101

    • Related Report
      2015 Research-status Report
  • [Journal Article] Laboratory medicine and sex differences2015

    • Author(s)
      Nishimura M, Nomura F.
    • Journal Title

      Nihon Rinsho

      Volume: 73 Pages: 587-600

    • NAID

      40020398301

    • Related Report
      2015 Research-status Report
  • [Presentation] 血液培養陽性検体よりの複数菌由来の核酸検出2018

    • Author(s)
      西村 基
    • Organizer
      第29回日本臨床微生物学会総会・学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] LQT5(KCNE1)D85Nの合併による重症化が推定されたLQT2の1家系2017

    • Author(s)
      西村基,齋藤直樹,江畑亮太,奥主健太郎,上田希彦,宇津野恵美,別府美奈子,松下一之,小原収,田中知明,小林欣夫,下条直樹,市川智彦
    • Organizer
      第24回日本遺伝子診療学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 新規慢性肝疾患マーカーFIC5.9( Fibrinogen alpha C chain5.9kD fragment ) は凝固線溶の変動を反映する2017

    • Author(s)
      西村基,菊地渉,佐藤守,松下一之,小寺義男,田中知明, 野村文夫
    • Organizer
      第57回日本臨床化学会年次学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 慢性肝疾患で低下する新規マーカーFIC5.9(Fibrinogen αC chain 5.9 kD fragment) の健常時産生メカニズム2017

    • Author(s)
      西村基
    • Organizer
      第64回日本臨床検査医学会学術集会・第29回世界病理臨床検査医学会連合
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] qPCR-HRM法およびNGSにより同定したAPC遺伝子Exon8欠損による家族性大腸腺腫症家系2016

    • Author(s)
      松下一之、糸賀栄、石毛崇之、西村基、別府美奈子、内垣洋祐、宇津野恵美、澤部祐司、野村文夫
    • Organizer
      日本臨床検査自動化学第48回大会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-09-23
    • Related Report
      2016 Research-status Report
  • [Presentation] Long-PCRと大量並列シーケンシングによる家族性地中海熱の原因遺伝子MEFVの遺伝子学的検査2016

    • Author(s)
      石毛崇之、糸賀栄、北村浩一、西村基、松下一之、野村文夫
    • Organizer
      日本臨床検査自動化学第48回大会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-09-22
    • Related Report
      2016 Research-status Report
  • [Presentation] 質量分析技術による「ゲノム・フリー」なApolipoprotein Eタイピング(迅速ApoE セロタイピング)を目指した試み2016

    • Author(s)
      西村 基
    • Organizer
      第63回日本臨床検査医学会学術集会
    • Place of Presentation
      神戸国際会議場(兵庫県神戸市)
    • Year and Date
      2016-09-02
    • Related Report
      2016 Research-status Report
  • [Presentation] ゲノム解析における偶発的所見に対する遺伝カウンセリングの必要性と課題2016

    • Author(s)
      松下一之、西村基、別府美奈子、糸賀栄、石毛崇之、北村浩一、宇津野恵美、澤部祐司、野村文夫
    • Organizer
      第40回日本遺伝カウンセリング学会学術集会/ The 13th International Congress of Human Genetics
    • Place of Presentation
      国立京都国際会館(京都府京都市)
    • Year and Date
      2016-04-06
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 遺伝性脊髄小脳変性症の複数の遺伝子変異を合併した症例における遺伝カウンセリング2016

    • Author(s)
      別府美奈子、澤井摂、宇津野恵美、石毛崇之、糸賀栄、磯瀬沙希里、新井公人、鈴木陽一、吉川由利子、西村基、野村文夫、桑原聡、松下一之
    • Organizer
      第40回日本遺伝カウンセリング学会学術集会/ The 13th International Congress of Human Genetics
    • Place of Presentation
      国立京都国際会館(京都府京都市)
    • Year and Date
      2016-04-06
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] ミトコンドリアゲノム全周解析のための簡便な前処理法2016

    • Author(s)
      西村 基、西村里美、姚躍、石毛崇之、糸賀栄、松下一之、野村文夫
    • Organizer
      第40回日本遺伝カウンセリング学会学術集会/ The 13th International Congress of Human Genetics
    • Place of Presentation
      国立京都国際会館(京都府京都市)
    • Year and Date
      2016-04-05
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 大学検査部に適した「質量分析手法を用いた次世代臨床検査」とは2015

    • Author(s)
      西村基
    • Organizer
      日本臨床検査医学会
    • Place of Presentation
      長良川国際会議場(岐阜県岐阜市)
    • Year and Date
      2015-11-19
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 自動分析法による血清25ヒドロキシビタミンD測定値の標準化:SRM 972aを校正に用いた測定2015

    • Author(s)
      西村 基、佐藤 守、石毛崇之 、東 達也、 野村 文夫
    • Organizer
      日本臨床化学会
    • Place of Presentation
      大阪大学コンベンションセンター(大阪府吹田市)
    • Year and Date
      2015-10-30
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] QT延長症候群遺伝子検査の次世代シーケンサーを用いた立ち上げとこれにより変異同定に至った Jervell and Lange-Nielsen Syndrome(JLNS) の一家系2015

    • Author(s)
      西村基 宇津野 恵美 上田 希彦 江畑 亮太 内海 紀子 糸賀 栄 小原 令子 別府 美奈子 松下 一之 小原 収 野村 文夫
    • Organizer
      日本人類遺伝学会
    • Place of Presentation
      タワーホール船堀(東京都江戸川区)
    • Year and Date
      2015-10-14
    • Related Report
      2015 Research-status Report
  • [Presentation] 保険収載された遺伝子検査・遺伝カウンセリング加算と次世代シーケンサー2015

    • Author(s)
      西村基
    • Organizer
      日本遺伝カウンセリング学会
    • Place of Presentation
      三井ガーデンホテル千葉(千葉県千葉市)
    • Year and Date
      2015-06-26
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-03-29  

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