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Development and clinical application of quantity profile analysis to inflammatory allied transcription factor activity by fluorescence correlation spectroscopy

Research Project

Project/Area Number 15K08612
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Laboratory medicine
Research InstitutionUniversity of Toyama

Principal Investigator

Kitajima Isao  富山大学, 大学院医学薬学研究部(医学), 教授 (50214797)

Co-Investigator(Kenkyū-buntansha) 仁井見 英樹  富山大学, 大学院医学薬学研究部(医学), 准教授 (50401865)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords転写因子 / NF-κB / 蛍光相関分光法 / ELISA / 活性定量 / プロファイル解析 / AP1 / DNA-転写因子結合アレイ法 / 先端検査デバイス / 炎症 / 発現プロファイル / CAGE法
Outline of Final Research Achievements

As for the quantity transcription factor activated analysis, an ELISA method is used at a study level. We developed new experimental apparatus for the detection of inflammatory allied transcription factor activity based on fluorescence correlation spectroscopy (FCS), which is able to analyze binding between DNA and protein in the liquid phase. We made each fluorescence DNA probe which specifically bound to NF-κB, AP1, NF-IL-6, SP1, NF-AT or OCT1. To assess the applicability of the FCS method, we quantitated each transcription factor activity in the human lymphocytes stimulated with TNF-α, LPS, or PMA/Ionomycin. In results, 1.5-fold increased NF-κB and AP1 activity was measured two hours after stimulation with TNF-α or PMA/Ionomycin. The quantity transcription assay by the FCS method is quick, simple, easy and high-throughput analytical method, compared to the ELISA method.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (21 results)

All 2018 2017 2016 2015

All Journal Article (8 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 7 results,  Open Access: 7 results) Presentation (7 results) (of which Int'l Joint Research: 3 results,  Invited: 5 results) Book (2 results) Patent(Industrial Property Rights) (4 results) (of which Overseas: 1 results)

  • [Journal Article] Serum biomarkers in patients with ossification of the posterior longitudinal ligament (OPLL):-inflammation in OPLL.2017

    • Author(s)
      Kawaguchi Y, Nakano M, Yasuda T, Seki S, Kayo Suzuki K, Yahara Y, Makino H, Kitajima I, Kimura T.
    • Journal Title

      PLOS ONE

      Volume: 12(5)

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Spondylodiscitis due to Parvimonas micra diagnosed by the melting temperature mapping method.2017

    • Author(s)
      Higashi Y, Nakamura S, Niimi H, Ueno T, Matsumoto K, Kawago K, Sakamaki I, Kitajima I, Yamamoto Y
    • Journal Title

      BMC infectious diseases

      Volume: 17(1) Issue: 1 Pages: 584-584

    • DOI

      10.1186/s12879-017-2690-4

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 感染症検査の新たな潮流2017

    • Author(s)
      仁井見英樹
    • Journal Title

      臨床化学

      Volume: 46(1) Pages: 190-190

    • Related Report
      2017 Annual Research Report
  • [Journal Article] SAD-B Phosphorylation of CAST Controls Active Zone Vesicle Recycling for Synaptic Depression.2016

    • Author(s)
      Mochida S, Hida Y, Tanifuji S, Hagiwara A, Hamada S, Abe M, Huan M1, Kitajima I, Sakimura K, Ohtsuka T
    • Journal Title

      Cell Report

      Volume: 16 Pages: 1-13

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] The active zone protein CAST regulates synaptic vesicle recycling and quantal size in the mouse hippocampus.2016

    • Author(s)
      Kobayashi S, Hida Y, Ishizaki H, Inoue E, Tanaka-Okamoto M, Yamasaki M, Miyazaki T, Masahiro F, Kitajima I, Takai Y, Watanabe M, Ohtsuka T, Manabe T
    • Journal Title

      Eur J Neurosci.

      Volume: 44 Issue: 5 Pages: 2272-2284

    • DOI

      10.1111/ejn.13331

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Apixaban for the Treatment of Japanese Subjects With Acute Venous Thromboembolism (AMPLIFY-J Study)2015

    • Author(s)
      Nakamura M, Nishikawa M, Komuro I, Kitajima I, Uetsuka Y, Yamagami T, Minamiguchi H, Yoshimatsu R, Tanabe K, Matsuoka N, Kanmuri K, Ogawa H
    • Journal Title

      Circulation Journal

      Volume: 79 Issue: 6 Pages: 1230-1236

    • DOI

      10.1253/circj.CJ-15-0195

    • NAID

      130005073151

    • ISSN
      1346-9843, 1347-4820
    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Eukaryote-Made Thermostable DNA Polymerase Enables Rapid PCR-Based Detection of Mycoplasma, Ureaplasma and Other Bacteria in the Amniotic Fluid of Preterm Labor Cases.2015

    • Author(s)
      Ueno T, Niimi H, Yoneda N, Yoneda S, Mori M, Tabata T, Minami H, Saito S, Kitajima I
    • Journal Title

      PLoS One.

      Volume: 10(6) Issue: 6 Pages: 1-17

    • DOI

      10.1371/journal.pone.0129032

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Melting temperature mapping method: A novel method for identification of unknown pathogenic microorganisms within three hours of sample of collection.2015

    • Author(s)
      Niimi H, Ueno T, Hayashi S, Abe A, Tsurue T, Mori M, Tabata H, Minami H, Goto M, Akiyama M, Yamamoto Y, Saito S, Kitajima I
    • Journal Title

      Scientific Reports.

      Volume: 5 Issue: 1 Pages: 12543-12543

    • DOI

      10.1038/srep12543

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Tm Mapping. A novel testing method for rapid bacterial identification without blood culture.2017

    • Author(s)
      Miimi H, Kitajima I
    • Organizer
      Singapore international infectious disease conference. 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Melting Temperature (Tm) Mapping Method. A Novel Method for Rapid Identification of Unknown Pathogenic Microorganisms within Three Hours of Sample Collection.2016

    • Author(s)
      Sugie K, Ueno T, Niimi H, Hayashi S, Mori M, Yamamoto Y, Saito S, Kitajima I
    • Organizer
      The 32nd World Congress of Biomedical laboratory Scinece
    • Place of Presentation
      Kobe, JAPAN
    • Year and Date
      2016-08-30
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Eukaryote-Made Taq Polymerase Enables Reliable Detection of Pathogens in Amniotic Fluid of Preterm Labor Cases-Development of a Novel Nested-PCR-Based Assay for Detecting Mycoplasma, Ureaplasma, other Bacteria and Fungi in Amniotic Fluid Samples.2016

    • Author(s)
      Ueno T, NiimiH, Yoneda N, Yoneda S, Mori M, Saito S, Kitajima I
    • Organizer
      The 32nd World Congress of Biomedical laboratory Scinece
    • Place of Presentation
      Kobe, JAPAN
    • Year and Date
      2016-08-30
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 血液凝固学からみた経口抗凝固薬の薬理作用2015

    • Author(s)
      北島勲
    • Organizer
      CVMW2015心血管代謝第23回日本血管生物医学会学術集会
    • Place of Presentation
      神戸
    • Year and Date
      2015-12-11
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 非ビタミンK経口抗凝固薬(NOAC)の薬理作用と臨床検査2015

    • Author(s)
      北島勲
    • Organizer
      第62回日本臨床検査医学会学術集会
    • Place of Presentation
      岐阜
    • Year and Date
      2015-11-20
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 高感度迅速起因菌同定とNF-kB活性化定量解析法による敗血症検査システム開発。2015

    • Author(s)
      北島勲
    • Organizer
      東北大学薬学研究科セミナー
    • Place of Presentation
      仙台
    • Year and Date
      2015-06-29
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Pharmacological characteristic of Novel oral anticoagulants.2015

    • Author(s)
      Kitajima Isao
    • Organizer
      The 79th Annual Meeting of the Japanese Circulation Society.
    • Place of Presentation
      大阪
    • Year and Date
      2015-04-24
    • Related Report
      2015 Research-status Report
    • Invited
  • [Book] 臨床検査データブック2018

    • Author(s)
      北島勲(高久史麿監修)
    • Total Pages
      1049
    • Publisher
      医学書院
    • ISBN
      9784260028264
    • Related Report
      2017 Annual Research Report
  • [Book] 臨床検査データブックLAB DATA2015-2016..2015

    • Author(s)
      北島勲(黒川清、春日正雅、北村聖編)
    • Total Pages
      1059
    • Publisher
      医学書院
    • Related Report
      2015 Research-status Report
  • [Patent(Industrial Property Rights)] 血液中の起炎菌をATP測定するための血液検体の前処理方法2017

    • Inventor(s)
      仁井見英樹、北島勲、杉江和茂、上野智浩
    • Industrial Property Rights Holder
      仁井見英樹、北島勲、杉江和茂、上野智浩
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2017-219547
    • Filing Date
      2017
    • Related Report
      2017 Annual Research Report
  • [Patent(Industrial Property Rights)] 感染症患者検体中の細菌数を16S ribosomal RNA 遺伝子コピー数 で迅速・正確に定量する検査技術2017

    • Inventor(s)
      仁井見英樹、北島勲、宮腰晃央、東祥嗣
    • Industrial Property Rights Holder
      仁井見英樹、北島勲、宮腰晃央、東祥嗣
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2017-246333
    • Filing Date
      2017
    • Related Report
      2017 Annual Research Report
  • [Patent(Industrial Property Rights)] 感染症患者検体中の細菌数を迅速かつ正確に定量する検査技術2017

    • Inventor(s)
      仁井見英樹、北島勲、宮腰晃央、東祥嗣
    • Industrial Property Rights Holder
      仁井見英樹、北島勲、宮腰晃央、東祥嗣
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2017-246724
    • Filing Date
      2017
    • Related Report
      2017 Annual Research Report
  • [Patent(Industrial Property Rights)] 改良Tmマッピング法2017

    • Inventor(s)
      仁井見英樹、大槻晋也、北島勲
    • Industrial Property Rights Holder
      仁井見英樹、大槻晋也、北島勲
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2017-246724
    • Filing Date
      2017
    • Related Report
      2017 Annual Research Report
    • Overseas

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Published: 2015-04-16   Modified: 2019-03-29  

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