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Detecting genetic alterations in the glioma-related molecular markers using cell free DNA from the cerebrospinal fluid

Research Project

Project/Area Number 15K10369
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Neurosurgery
Research InstitutionSaitama Medical University

Principal Investigator

ADACHI JUNICHI  埼玉医科大学, 医学部, 准教授 (70291143)

Co-Investigator(Kenkyū-buntansha) 西川 亮  埼玉医科大学, 医学部, 教授 (90237678)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Fiscal Year 2017: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2016: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2015: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
KeywordsDNA / glioma / pediatric / CSF / circulating / genetic
Outline of Final Research Achievements

Using cerebrospinal fluid of glioma patients, tumor-derived circulating cell free (ccf) DNA was extracted. It was found that more than 50 ng of ccf DNA can be obtained from 1 ml of cerebrospinal fluid. Using this DNA as a template, it was possible to screen point mutations of IDH1, H3F3A, BRAF genes by real-time PCR / high resolution melting curve analysis method. Moreover, it was also found that quantitative analysis of MGMT gene promoter methylation is also possible.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (14 results)

All 2017 2016 2015

All Journal Article (4 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 4 results,  Acknowledgement Compliant: 1 results) Presentation (10 results) (of which Int'l Joint Research: 4 results)

  • [Journal Article] Detecting alterations in the glioma-related molecular markers using cell free DNA from the cerebrospinal fluid2017

    • Author(s)
      Adachi J, Watanabe K, Suzuki T, Mishima K, Kobayashi Y Miyake Y, Fujimaki T, NIshikawa R
    • Journal Title

      Neuro-Oncology

      Volume: 19 Pages: 22-23

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Mutation analysis of the isocitrate dehydrogenase 1 (IDH1) gene using cell free DNA from the cerebrospinal fluid (CSF) of glioma patients2016

    • Author(s)
      Adachi J,Watanabe K, Suzuki T, Mishima K, Fujimaki T, Nishikawa R
    • Journal Title

      Neuro-Oncology

      Volume: 18 Pages: 28-28

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Establishment of a rapid and efficient genetic analysis system of pediatric glioma2015

    • Author(s)
      Adachi J, Watanabe K, Suzuki T, Ishida J, Mishima K, Nishikawa R
    • Journal Title

      Childs Nerv Syst

      Volume: 31 Pages: 1952-1952

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Establishment of a rapid and efficient genetic analysis system of gliomas2015

    • Author(s)
      Adachi J, Watanabe K, Totake K, Suzuki T,Mishima K, Ishida J, Fujimaki T, Nishikawa R
    • Journal Title

      Neuro-Oncology

      Volume: 17 Pages: 138-138

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] Detecting alterations in the glioma-related molecular markers using cell free DNA from the cerebrospinal fluid2017

    • Author(s)
      Adachi J, Watanabe K, Suzuki T, Mishima K, Kobayashi Y, Miyake Y, Fujimaki T, Nishikawa R
    • Organizer
      5th Quadrennial Meeting of the World Federation of Neuro-Oncology Societies
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 髄液中のcirculating cell free DNAを用いたグリオーマのLiquid Biopsy の可能性2017

    • Author(s)
      安達淳一,渡邊こずえ、三宅勇平、小林裕介、鈴木智成、三島一彦、佐々木惇、藤巻高光、西川 亮
    • Organizer
      第35回 日本脳腫瘍病理学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 小児OligodendrogliomaにおけるGlioma分子マーカーの解析2016

    • Author(s)
      安達淳一、渡邊こずえ、遠竹恭子、鈴木智成、三島一彦、藤巻高光、佐々木惇、西川 亮
    • Organizer
      第34回 日本脳腫瘍病理学会学術集会
    • Place of Presentation
      有明、東京都
    • Related Report
      2016 Research-status Report
  • [Presentation] Mutation analysis of the isocitrate dehydrogenase 1 (IDH1) gene using cell free DNA from the cerebrospinal fluid (CSF) of glioma patients2016

    • Author(s)
      Adachi J,Watanabe K, Suzuki T, Mishima K, Fujimaki T, Nishikawa R
    • Organizer
      12th Meeting of the European Association of Neuro-Oncology
    • Place of Presentation
      Mannheim, Germany
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] グリオーマ患者髄液中のcell free DNAを用いたIDH1遺伝子変異の検出2016

    • Author(s)
      安達 淳一, 渡邊 こずえ, 鈴木 智成, 三島 一彦, 藤巻 高光, 西川 亮
    • Organizer
      一般社団法人日本脳神経外科学会 第75回学術総会
    • Place of Presentation
      福岡市、福岡県
    • Related Report
      2016 Research-status Report
  • [Presentation] グリオーマ患者髄液中のcell free DNA を用いたグリオーマ関連分子マーカーの解析2016

    • Author(s)
      安達淳一、渡邊こずえ、鈴木智成、三島一彦、藤巻高光、三宅勇平、西川 亮
    • Organizer
      第34回 日本脳腫瘍学会学術総会
    • Place of Presentation
      甲府市、山梨県
    • Related Report
      2016 Research-status Report
  • [Presentation] Establishment of a rapid and efficient genetic analysis system of gliomas2015

    • Author(s)
      Adachi J, Watanabe K, Totake K, Suzuki T, Mishima K, Ishida J, Fujimaki T, Nishikawa R
    • Organizer
      20th annual meeting of the society for Neuro-Oncology
    • Place of Presentation
      San Antonio, TX, USA
    • Year and Date
      2015-11-19
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] グリオーマにおける効率かつ迅速な遺伝子解析体制の確立2015

    • Author(s)
      安達淳一、渡邊こずえ、遠竹恭子、鈴木智成、三島一彦、石田穣治、藤巻高光、佐々木惇、西川 亮
    • Organizer
      日本脳神経外科学会 第74回 学術総会
    • Place of Presentation
      ロイトン札幌、札幌市
    • Year and Date
      2015-10-14
    • Related Report
      2015 Research-status Report
  • [Presentation] Establishment of a rapid and efficient genetic analysis system of pediatric glioma2015

    • Author(s)
      Adachi J, Watanabe K, Suzuki T, Ishida J, Mishima K, Nishikawa R
    • Organizer
      43rd Annual Meeting of International Society for Pediatric Neurosurgery
    • Place of Presentation
      Izmir, Turkey
    • Year and Date
      2015-10-04
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] グリオーマの効率かつ迅速な遺伝子解析体制の確立2015

    • Author(s)
      安達淳一、渡邊こずえ、遠竹恭子、鈴木智成、三島一彦、石田穣治、藤巻高光、佐々木惇、西川 亮
    • Organizer
      第33回 日本脳腫瘍病理学会学術集会
    • Place of Presentation
      JRホテルクレメント高松、高松市、香川県
    • Year and Date
      2015-05-29
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-03-29  

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