• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Comprehensive neuroanatomy by using non-staining imaging and informatics

Research Project

Project/Area Number 15K12143
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Life / Health / Medical informatics
Research InstitutionKeio University

Principal Investigator

Kotaro Oka  慶應義塾大学, 理工学部(矢上), 教授 (10276412)

Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords生体生命情報学 / 生物物理 / 神経科学 / 細胞・組織 / 可視化 / 脳ドラフトマッピング / 無染色イメージング / ラマン分光イメージング / ハイパースペクトル / 神経解剖学 / 主成分分析 / 神経情報学
Outline of Final Research Achievements

We have developed a new method to classify brain regions rationally. We obtain Raman spectral information for each pixel on the brain slices of songbirds. Using this spectral information, regions with similar spectra were extracted and mapped. As a result, myelin wrapped nerve fibers and several neurons with neurotransmitters (serotonin, dopamine and glutamate) could be detected without staining. As a method to rationally determine the brain region boundary, we attempted Voronoi division using nuclear position. As a result, we succeeded to divide the entire coronal section of the bird's brain into Voronoi units. By using this division method together with unstained imaging, it is possible to construct a brain draft map at high speed.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (8 results)

All 2016 2015

All Presentation (8 results) (of which Int'l Joint Research: 4 results,  Invited: 2 results)

  • [Presentation] ラマン分光等イメージング技術で紐解く生命現象と情報伝達過程2016

    • Author(s)
      岡浩太郎
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Bio-imaging without targets: an idea for making the draft map of the brain2016

    • Author(s)
      Oka K
    • Organizer
      NSF/USA Workshop: Comparative Principles of Brain Architecture and Functions
    • Place of Presentation
      San Diego (USA)
    • Year and Date
      2016-11-17
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Relationship between song acoustic similarity and neural activity in female zebra finches2016

    • Author(s)
      Tabata R, Inda M, Hotta K, Oka K
    • Organizer
      Neuroscience 2016
    • Place of Presentation
      San Diego (USA)
    • Year and Date
      2016-11-12
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Auditory neural activity in zebra finch forebrain depends on acoustic strucures of syllables2016

    • Author(s)
      Inda M, Tabata R, Hotta K, Oka K
    • Organizer
      Neuroscience 2016
    • Place of Presentation
      San Diego (USA)
    • Year and Date
      2016-11-12
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Neural activity is increased during pair song over non-pair song in female zebra finch2016

    • Author(s)
      Tabata R, Inda M, Hotta K, Oka K
    • Organizer
      第39回日本神経科学大会
    • Place of Presentation
      パシフィコ横浜(神奈川県・横浜市)
    • Year and Date
      2016-07-20
    • Related Report
      2016 Annual Research Report
  • [Presentation] Analysis of Neural Activities to Synthetic Acoustic Stimuli in the Avian Higher-order Auditory Region2016

    • Author(s)
      Inda M, Tabata R, Hotta K, Oka K
    • Organizer
      第39回日本神経科学大会
    • Place of Presentation
      パシフィコ横浜(神奈川県・横浜市)
    • Year and Date
      2016-07-20
    • Related Report
      2016 Annual Research Report
  • [Presentation] Song preference measured by behaviors depends on song similarity in female zebra finch.2015

    • Author(s)
      Tabata R, Hotta K, Oka K.
    • Organizer
      Neuroscience 2015
    • Place of Presentation
      Chicago (USA)
    • Year and Date
      2015-10-17
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Relationship between directed song similarity and behavior in female zebra finches.2015

    • Author(s)
      Tabata R, Hotta K, Oka K
    • Organizer
      第38回日本神経科学大会
    • Place of Presentation
      神戸国際会議場(兵庫県神戸市)
    • Year and Date
      2015-07-28
    • Related Report
      2015 Research-status Report

URL: 

Published: 2015-04-16   Modified: 2018-03-22  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi