• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Self-accummulating detection systems for environmental pollutants

Research Project

Project/Area Number 15K12221
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Environmental impact assessment
Research InstitutionOkazaki Research Facilities, National Institutes of Natural Sciences

Principal Investigator

Aono Shigetoshi  大学共同利用機関法人自然科学研究機構(岡崎共通研究施設), 岡崎統合バイオサイエンスセンター, 教授 (60183729)

Co-Investigator(Renkei-kenkyūsha) Muraki Norifumi  分子科学研究所, 生命・錯体分子科学研究領域, 助教 (20723828)
Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsセンサータンパク質 / ヘム結合タンパク質 / ヘム / 銅センサータンパク質 / センサー型転写調節因子 / X線結晶構造解析
Outline of Final Research Achievements

As a candidate of sensorprotein for heavy metal ions, preparation and structural determination were tried with copper sensor proteins that act as acopper-sensing transcriptional regulators. And heme transport proteins in Corynebacteria were also chosen as research targets. In this work, we have studied the structural and functional relationships of HtaA and HtaB from Corynebacterium glutamicum. We determined the crystal structure of the N-, and C-terminal domains of HtaA (HtaA-N and HtaA-C, respectively) and HtaB. HtaA-N consists of 11 β strands and two short α helices and accommodates one heme molecule with Tyr58 located in the first α helix as the heme axial ligand. Tyr58 forms a hydrogen bond with His111.
HtaA-C and HtaB show similar global structures to HtaA-N. The key residues for heme-binding and recognition including the axial ligand of heme and residues involved in the hydrogen bonding interactions with heme are conserved among HtaA-N, HtaA-C, and HtaB.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (22 results)

All 2016 2015

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 2 results,  Acknowledgement Compliant: 1 results) Presentation (19 results) (of which Int'l Joint Research: 15 results,  Invited: 9 results)

  • [Journal Article] A Study of the Dynamics of the Heme Pocket and C-helix in CooA Upon CO Dissociation Using Time-resolved Visible and UV Resonance Raman Spectroscopy2016

    • Author(s)
      Akihiro Otomo, Haruto Ishikawa, Misao Mizuno, Tetsunari Kimura, Minoru Kubo, Yoshitsugu Shiro, Shigetoshi Aono, and Yasuhisa Mizutani
    • Journal Title

      J. Phys. Chem. B

      Volume: 120 Issue: 32 Pages: 7836-7843

    • DOI

      10.1021/acs.jpcb.6b05634

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters2016

    • Author(s)
      N. Muraki, C. Kitatsuji, M. Ogura, T. Uchida, K. Ishimori, and S. Aono
    • Journal Title

      Int. J. Mol. Sci.

      Volume: 17 Issue: 6 Pages: 829-839

    • DOI

      10.3390/ijms17060829

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Structural Basis for Heme Recognition by HmuT Responsible for Heme Transport to the Heme Transporter in Corynebacterium glutamicum2016

    • Author(s)
      Norifumi Muraki
    • Journal Title

      Chemistry Letters

      Volume: 45 Issue: 1 Pages: 24-26

    • DOI

      10.1246/cl.150894

    • NAID

      130005118778

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Structural Basis for the Molecular Mechanism of Heme Acquisition in Corynebacterium glutamicum2016

    • Author(s)
      Shigetoshi Aono, Norifumi Muraki
    • Organizer
      8th Asian Biological Inorganic Chemistry Conference
    • Place of Presentation
      Auckland, New Zealand
    • Year and Date
      2016-12-04
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Structural analysis of a novel heme acquisition protein, heme transport-associated (Hta) family2016

    • Author(s)
      Norifumi Muraki, Shigetoshi Aono
    • Organizer
      9th Korea-Japan Seminars on Biomolecular Sciences: Experiments and Simulations
    • Place of Presentation
      Gyeongju, Korea
    • Year and Date
      2016-11-14
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] New functions of heme: sensing and signaling in biological systems2016

    • Author(s)
      Shigetoshi Aono
    • Organizer
      9th Korea-Japan Seminars on Biomolecular Sciences: Experiments and Simulations
    • Place of Presentation
      Gyeongju, Korea
    • Year and Date
      2016-11-14
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Structural Basis for the Mechanism of Oxygen Sensing by a Chemotaxis Signal Transducer Protein Aer22016

    • Author(s)
      Hitomi Sawai, Shigetoshi Aono
    • Organizer
      19th International Conference on Oxygen Binding and Sensing Proteins
    • Place of Presentation
      Hamburg, Germany
    • Year and Date
      2016-09-11
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Crystal structures of novel heme binding domains in Corynebacterium glutamicum HtaA and HmuT responsible for heme uptake2016

    • Author(s)
      Shigetoshi Aono, Norifumi Muraki
    • Organizer
      10th International Biometals Symposium
    • Place of Presentation
      Dresden, Germany
    • Year and Date
      2016-07-10
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Structural Basis for Heme Acquisition in Corynebacterium glutamicum2016

    • Author(s)
      Shigetoshi Aono
    • Organizer
      9th International Conference on Porphyrins and Phthalocyanines
    • Place of Presentation
      Nanjing, China
    • Year and Date
      2016-07-03
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] コリネバクテリアのヘム取込み系の構造と機構2016

    • Author(s)
      村木則文、青野重利
    • Organizer
      第43回生体分子科学討論会
    • Place of Presentation
      名古屋大学、名古屋市、愛知県
    • Year and Date
      2016-06-24
    • Related Report
      2016 Annual Research Report
  • [Presentation] Structure and Function of Heme Acquisition System in Corynebacterium glutamicum2016

    • Author(s)
      Shigetoshi Aono
    • Organizer
      229th ECS Meeting
    • Place of Presentation
      San Diego, U.S.A.
    • Year and Date
      2016-05-29
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular Mechanisms of Heme Homeostasis in Gram-positive Bacteria2015

    • Author(s)
      Shigetoshi Aono
    • Organizer
      Pacifichem 2015
    • Place of Presentation
      Honolulu, USA
    • Year and Date
      2015-12-15
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Structural basis for heme acquisition in Corynebacterium glutamicum2015

    • Author(s)
      Norifumi Muraki
    • Organizer
      Pacifichem 2015
    • Place of Presentation
      Honolulu, USA
    • Year and Date
      2015-12-15
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Spectroscopic Properties of Heme-binding protein HupD responsible for heme acquisition in Listeria monocytogenes2015

    • Author(s)
      Shigetoshi Aono
    • Organizer
      Pacifichem 2015
    • Place of Presentation
      Honolulu, USA
    • Year and Date
      2015-12-15
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Corynebacterium glutamicumのヘム取込みに関与するヘム輸送タンパク質の構造と機構2015

    • Author(s)
      青野重利
    • Organizer
      第116回触媒討論会
    • Place of Presentation
      三重大学、津市、三重県
    • Year and Date
      2015-09-16
    • Related Report
      2015 Research-status Report
  • [Presentation] コリネバクテリアのヘム取り込みに関わるタンパク質の構造機能相関2015

    • Author(s)
      村木則文
    • Organizer
      第9回バイオ関連化学シンポジウム
    • Place of Presentation
      熊本大学、熊本市、熊本県
    • Year and Date
      2015-09-10
    • Related Report
      2015 Research-status Report
  • [Presentation] Regulation of heme homeostasis in Gram positive bacteria2015

    • Author(s)
      Shigetoshi Aono
    • Organizer
      17th International Conference on Biological Inorganic Chemistry
    • Place of Presentation
      Beijing, China
    • Year and Date
      2015-07-20
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Structure and function of heme-responsive transcriptional regulator HrtR2015

    • Author(s)
      Shigetoshi Aono
    • Organizer
      FEBS Congress
    • Place of Presentation
      Berlin, Germany
    • Year and Date
      2015-07-04
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Corynebacterium glutamicumのヘム取り込み系におけるヘム認識の構造基盤2015

    • Author(s)
      村木則文
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール、徳島市、徳島県
    • Year and Date
      2015-06-24
    • Related Report
      2015 Research-status Report
  • [Presentation] Molecular Mechanism of Heme-responsive Transcriptional Regulation in Lactococcus lactis2015

    • Author(s)
      Shigetoshi Aono
    • Organizer
      6th European Conference on Chemistry for Life Sciences
    • Place of Presentation
      Lisbon, Portugal
    • Year and Date
      2015-06-10
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Structural basis for heme transport by HmuT in Corynebacterium glutamicum2015

    • Author(s)
      Shigetoshi Aono
    • Organizer
      227th The Electrochemical Society Meeting
    • Place of Presentation
      Chicago, USA
    • Year and Date
      2015-05-24
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular Mechanisms of Heme Acquisition in Corynebacterium glutamicum revealed by X-ray crystallography2015

    • Author(s)
      Shigetoshi Aono
    • Organizer
      5th Georgian Bay International Conference on Bioinorganic
    • Place of Presentation
      Parry Sound, Canada
    • Year and Date
      2015-05-19
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited

URL: 

Published: 2015-04-16   Modified: 2018-03-22  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi