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Toward a modern interpretation of emergence concept

Research Project

Project/Area Number 15K12433
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Sociology/History of science and technology
Research InstitutionThe University of Tokyo

Principal Investigator

Sato Naoki  東京大学, 大学院総合文化研究科, 教授 (40154075)

Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2017: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2016: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords生命概念 / 創発 / メカニスム / 生物学史 / 文献データベース / クラスタリング解析 / 細胞内共生説 / 生物対流
Outline of Final Research Achievements

As an approach to the problem related to rational understanding of emergent phenomena in life sciences, we analyzed the contemporary history of molecular biology by clustering all the terms in the titles and abstracts of all articles published from 1965 to 2014 in selected 32 major biological journals available in the PubMed database of NCBI, USA. The results suggested that the 40-years period is divided in three phases, and that the notion emergence became abundant in the third phase beginning from 2000, or genomic era. We also analyzed emergent phenomena, such as endosymbiotic origin of organelles and bioconvection.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (24 results)

All 2018 2017 2016 2015 Other

All Int'l Joint Research (2 results) Journal Article (8 results) (of which Peer Reviewed: 5 results,  Open Access: 4 results,  Acknowledgement Compliant: 1 results) Presentation (9 results) (of which Int'l Joint Research: 2 results,  Invited: 2 results) Book (4 results) Remarks (1 results)

  • [Int'l Joint Research] Ecole Normale Superieure(フランス)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] パスツール研究所/高等師範学校(ENS)(フランス)

    • Related Report
      2015 Research-status Report
  • [Journal Article] "Life-bearing molecules" versus "life-embodying systems": two contrasting views on the what-is-life (WIL) problem persisting from the early days of molecular biology to the post-genomic cell- and organism-level biology.2018

    • Author(s)
      N. Sato
    • Journal Title

      BioSystems

      Volume: 167 Pages: 24-32

    • DOI

      10.1016/j.biosystems.2018.04.001

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Analysis and modeling of the inverted bioconvection in Chlamydomonas reinhardtii: emergence of plumes from the layer of accumulated cells.2018

    • Author(s)
      Sato, N., Sato, K., Toyoshima, M.
    • Journal Title

      Heliyon

      Volume: 4 Issue: 3 Pages: e00586-e00586

    • DOI

      10.1016/j.heliyon.2018.e00586

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Revisiting the theoretical basis of the endosymbiotic origin of plastids in the original context of Lynn Margulis on the origin of mitosing, eukaryotic cells.2017

    • Author(s)
      N. Sato
    • Journal Title

      J. Theor. Biol.

      Volume: 434 Pages: 104-113

    • DOI

      10.1016/j.jtbi.2017.08.028

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Conservation versus discontinuity in the genealogy of cyanobacteria and plastids: Fantasy and reality of the endosymbiogenesis theory of plastid origin.2016

    • Author(s)
      N. Sato
    • Journal Title

      Endocytobiosis Cell Res.

      Volume: 27 Pages: 33-36

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] 色素体細胞内共生説の源流:メレシコフスキー論文の紹介と再評価2016

    • Author(s)
      佐藤直樹
    • Journal Title

      光合成研究

      Volume: 26 Pages: 106-117

    • NAID

      40020946489

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] PPMM(パリ、パスツール、モノー、モランジュ)――生物科学の歴史の証人たち2016

    • Author(s)
      佐藤直樹
    • Journal Title

      みすず書房ホームページ トピックス

      Volume: -

    • Related Report
      2016 Research-status Report
    • Open Access
  • [Journal Article] 東大教員が語る偉人伝:ジャック・リュシアン・モノー2015

    • Author(s)
      佐藤直樹
    • Journal Title

      東京大学新聞

      Volume: 2714 Pages: 1-1

    • Related Report
      2015 Research-status Report
  • [Journal Article] 私たちの暮らしにも活かされているパスツールの偉業2015

    • Author(s)
      佐藤直樹
    • Journal Title

      心の健康ニュース

      Volume: 2015 Pages: 1-1

    • Related Report
      2015 Research-status Report
  • [Presentation] 単細胞緑藻Chlamydomonas debaryanaにおける安定同位体を用いた脂質代謝の研究2018

    • Author(s)
      佐藤直樹,豊島正和
    • Organizer
      植物生理学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 色素体細胞内共生説の再検討2017

    • Author(s)
      佐藤直樹
    • Organizer
      光合成学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 色素体の細胞内共生説:あなたは信じる? 信じない?2017

    • Author(s)
      佐藤直樹
    • Organizer
      ラン藻ゲノム交流会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 今こそ改訂すべき色素体の細胞内共生説2017

    • Author(s)
      佐藤直樹
    • Organizer
      進化学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 色素体の細胞内共生説におけるリン・マーギュリスの貢献の再評価2017

    • Author(s)
      佐藤直樹
    • Organizer
      共生学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 葉緑体細胞内共生説の虚と実2016

    • Author(s)
      佐藤直樹
    • Organizer
      生物学基礎論研究会
    • Place of Presentation
      慶応義塾大学日吉キャンパス(神奈川県・川崎市)
    • Year and Date
      2016-09-06
    • Related Report
      2016 Research-status Report
  • [Presentation] Ordered motion from chaos: Inverted bioconvection in <i>Chlamydomonas reinhardtii</i>2016

    • Author(s)
      N. Sato, M. Toyoshima and K. Sato
    • Organizer
      Chlamy 2016
    • Place of Presentation
      京都国際会館(京都府・京都市)
    • Year and Date
      2016-06-27
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 勃興期の分子生物学から見た進化と総合2016

    • Author(s)
      佐藤直樹
    • Organizer
      科学基礎論学会
    • Place of Presentation
      埼玉大学(埼玉県・さいたま市)
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] 40 years after "Le hasard et la necessite" (アクサンは表示できないため省略)2015

    • Author(s)
      佐藤直樹
    • Organizer
      生物学の哲学・歴史・社会学に関する国際会議(ISHPSSB2015)
    • Place of Presentation
      ケベック大学モントリオール校(カナダ)
    • Year and Date
      2015-07-05
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Book] 創発の生命学 生命が1ギガバイトから抜け出すための30章2018

    • Author(s)
      佐藤直樹
    • Total Pages
      288
    • Publisher
      青土社
    • ISBN
      9784791770649
    • Related Report
      2017 Annual Research Report
  • [Book] 細胞内共生説の謎 隠された歴史とポストゲノム時代における新展開2018

    • Author(s)
      佐藤直樹
    • Total Pages
      300
    • Publisher
      東京大学出版会
    • ISBN
      9784130602365
    • Related Report
      2017 Annual Research Report
  • [Book] 生物科学の歴史 現代の生命思想を理解するために2017

    • Author(s)
      ミシェル・モランジュ著・佐藤直樹訳
    • Total Pages
      440
    • Publisher
      みすず書房
    • Related Report
      2016 Research-status Report
  • [Book] 進化する遺伝子概念2015

    • Author(s)
      ジャン・ドゥーシュ著,佐藤直樹訳
    • Total Pages
      288
    • Publisher
      みすず書房
    • Related Report
      2015 Research-status Report
  • [Remarks] 佐藤直樹研究室ホームページ

    • URL

      http://nsato4.c.u-tokyo.ac.jp/

    • Related Report
      2016 Research-status Report

URL: 

Published: 2015-04-16   Modified: 2019-03-29  

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