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Development of the chemical detectors and inhibitors for protein methylation toward chemical epigenomics

Research Project

Project/Area Number 15K12761
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Chemical biology
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

Sohtome Yoshihiro  国立研究開発法人理化学研究所, 袖岡有機合成化学研究室, 研究員 (50431888)

Co-Investigator(Kenkyū-buntansha) 島津 忠広  国立研究開発法人理化学研究所, 主任研究員研究室等, 専任研究員 (10618771)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsエピゲノム / タンパク質メチル化 / 検出プローブ / 阻害剤 / プロテオーム / 翻訳後修飾
Outline of Final Research Achievements

Protein methylation is a reversible modification that varies dynamically in response to the environment. In order to identify methylated proteins, antibodies specific for methylated lysine residues are generally required. Since this methylated antibody is difficult to prepare, the methylome analysis has been relatively neglected as compared with other post-translational modification reactions. In this study, we aimed to 1) develop a methodology to detect protein methylation without using antibody, and to 2) explore protein inhibitors using the detection system.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (13 results)

All 2017 2016 2015

All Presentation (12 results) (of which Int'l Joint Research: 5 results,  Invited: 6 results) Book (1 results)

  • [Presentation] Chemical Strategies to Control Chiral Environments Constructed by Molecular Catalysts and Enzymes2017

    • Author(s)
      Yoshihiro Sohtome
    • Organizer
      The 3rd RIKEN-Academia Sinica Joint Conference: Focus on Chemistry and Chemical Biology
    • Place of Presentation
      RIKEN (Wako, Saitama)
    • Year and Date
      2017-03-29
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Synthesis of selenium-based S-adenocylmethionine analogs2017

    • Author(s)
      Mai Akakabe, Yoshihiro Sohtome, Naoki Terayama, Tadahiro Shimazu, Yoichi, Shinkai, Mikiko Sodeoka
    • Organizer
      RIKEN Epigenetics in Tsukuba
    • Place of Presentation
      RIKEN Tsukuba (Tsukuba, Ibaraki)
    • Year and Date
      2017-02-16
    • Related Report
      2016 Research-status Report
  • [Presentation] ケミカルエピゲノムの新展開2017

    • Author(s)
      五月女宜裕
    • Organizer
      新領域研究グループ『精密物質変換のための分子空間化学』 2017シンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 特異な不斉空間制御を可能とする有機触媒・遷移金属錯体触媒2017

    • Author(s)
      五月女宜裕
    • Organizer
      新化学技術推進協会、先端化学・材料技術部会、高選択性反応分科会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 分野、研究室の垣根を超えた異分野融合型-有機合成化学2017

    • Author(s)
      五月女宜裕
    • Organizer
      中堅・若手リーダーのためのYUGOKAFE NExT
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ProSeAMを用いるケミカルメチローム解析及びタンパク質メチル化阻害剤探索2017

    • Author(s)
      五月女宜裕、島津忠広、Barjau Joaquin、藤城信哉、赤壁麻依、寺山直樹、どど孝介、伊藤昭博、吉田稔、眞貝洋一、袖岡幹子
    • Organizer
      日本ケミカルバイオロジー学会 第12回年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Synthetic Strategies to Control and Analyze Protein Methylation2017

    • Author(s)
      Yoshihiro Sohtome
    • Organizer
      RIKEN Symposium on Chemistry and Biochemistry of Epigenetic Regulation
    • Place of Presentation
      RIKEN (Wako, Saitama)
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] Exploring Histone Methyltransferase Inhibitors based on Structural Development of Chaetocin2016

    • Author(s)
      Yoshihiro Sohtome, Shinya Fujishiro, Kosuke dodo, Eriko Iwasa, Yiuou Teng, Yoshitaka Hamashima, Akihiro Ito, Minoru Yoshida, Mikiko Sodeoka
    • Organizer
      International Symposium for RIKENEpigenetics Program 2016
    • Place of Presentation
      埼玉県・和光市
    • Year and Date
      2016-02-15
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Uncovering protein methylation with a selenium based S-adenosyl-methionine analog2016

    • Author(s)
      Tadahiro Shimazu, Barjau Joaquin, Yoshihiro Sohtome, Mikiko Sodeoka, Yoichi Shinkai
    • Organizer
      International Symposium for RIKENEpigenetics Program 2016
    • Place of Presentation
      埼玉県・和光市
    • Year and Date
      2016-02-15
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Symbiosis between molecular catalysis and chemical epigenetics2016

    • Author(s)
      Yoshihiro Sohtome
    • Organizer
      14th RIKEN Interdisciplinary Exchange Evening
    • Place of Presentation
      RIKEN (Wako, Saitama)
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] Exploring chemical strategies to control and analyze protein methylations2015

    • Author(s)
      Yoshihiro Sohtome, Joaquin Barjau, Shinya Fujishiro, Kosuke Dodo, Akihiro Ito, Minoru Yoshida, Tadahiro Shimazu, Yoichi Shinkai and Mikiko Sodeoka
    • Organizer
      Frontiers in Chromatin Biology and Chemical Epigenetics/Epigenomics, PacifiChem 2015
    • Place of Presentation
      Honolulu (USA)
    • Year and Date
      2015-12-15
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Exploring nonhistone lysine methylation with a selenium based S-adenosyl-methionine analogue2015

    • Author(s)
      Tadahiro Shimazu, Barjau Joaquin, Yoshihiro Sohtome, Mikiko Sodeoka, Yoichi Shinkai
    • Organizer
      第40回内藤コンファレス
    • Place of Presentation
      北海道・札幌市
    • Year and Date
      2015-09-16
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Book] 実験医学別冊 エピジェネティクス実験スタンダード: もう悩まない!ゲノム機能制御の読み解き方/メチル化酵素の新規標的分子の網羅的解析2017

    • Author(s)
      島津忠広、五月女宜裕、袖岡幹子、眞貝洋一
    • Total Pages
      398
    • Publisher
      羊土社
    • ISBN
      475810199X
    • Related Report
      2017 Annual Research Report

URL: 

Published: 2015-04-16   Modified: 2019-03-29  

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