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Creation of peptide ligase that enables protein-linked structure formation by novel function screening method

Research Project

Project/Area Number 15K13313
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Nanobioscience
Research InstitutionThe University of Tokyo

Principal Investigator

Ichiki Takanori  東京大学, 大学院工学系研究科(工学部), 教授 (20277362)

Co-Investigator(Renkei-kenkyūsha) UENO Shingo  川崎市産業振興財団, ナノ医療イノベーションセンター, 副主幹研究員 (30594650)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2017: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2016: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Keywordsペプチドリガーゼ / タンパク質アレイ / 酵素改変 / Sortase
Outline of Final Research Achievements

It is expected to develop a technique for artificially designing and arranging various proteins responsible for biochemical reactions and reconstructing the biochemical reaction network.In this study, we propose a method to create peptide ligase that enables intermolecular coupling of proteins and peptides, and accumulation on solid phase, and developed and verified necessary basic technologies. We developed a technique to immobilize the cell-free synthesized protein on the solid phase using sortase, a protein transferase derived from gram-positive bacteria. Then we experimentally clarified the problems which become prominent in the coexistence of cell-free translation and sortase reaction system, and discussed their solutions.These results are expected to contribute to the future development of screening technology for sortase variants by combining with microarray chip technology.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (34 results)

All 2018 2017 2016 2015

All Journal Article (4 results) (of which Peer Reviewed: 4 results,  Open Access: 4 results) Presentation (29 results) (of which Int'l Joint Research: 8 results,  Invited: 5 results) Book (1 results)

  • [Journal Article] Phototriggered Control of Enzyme Reactions toward High-throughput Screening on a Microwell Array Chip2017

    • Author(s)
      Shingo Ueno, Takanori Ichiki
    • Journal Title

      Journal of Photopolymer Science and Technology

      Volume: 30 Issue: 6 Pages: 657-660

    • DOI

      10.2494/photopolymer.30.657

    • NAID

      130006309155

    • ISSN
      0914-9244, 1349-6336
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] In situ Synthesis and Immobilization of Enzyme Molecules on Microreactor Array Chips2015

    • Author(s)
      Shingo Ueno, Tatsunori Hirai, Shusuke Sato, Manish Biyani, Hiromi Kuramochi, Ryo Iizuka, Takanori Akagi, Takashi Funatsu, and Takanori Ichiki
    • Journal Title

      Journal of Photopolymer Science and Technology

      Volume: 28 Issue: 5 Pages: 719-725

    • DOI

      10.2494/photopolymer.28.719

    • NAID

      130005104290

    • ISSN
      0914-9244, 1349-6336
    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Present Status and Trends in Development of High Density Microarray2015

    • Author(s)
      上野 真吾、ビヤニマニッシュ、佐藤 秀介、ラジ・クマールスバシニ、倉持 宏実、 赤木 貴則、一木 隆範
    • Journal Title

      BUNSEKI KAGAKU

      Volume: 64 Issue: 6 Pages: 421-429

    • DOI

      10.2116/bunsekikagaku.64.421

    • NAID

      130005086941

    • ISSN
      0525-1931
    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Microintaglio printing for soft lithography-based in situ microarrays2015

    • Author(s)
      Manish Biyani, Takanori Ichiki
    • Journal Title

      Microarrays

      Volume: 4 Issue: 3 Pages: 311-323

    • DOI

      10.3390/microarrays4030311

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] 高集積マイクロウェルアレイシステムによるネオバイオ分子創出2018

    • Author(s)
      上野真吾、一木隆範
    • Organizer
      日本農芸化学会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ペプチド連結酵素による共有結合を利用したタンパク質その場固定化技術の開発2018

    • Author(s)
      若井涼、上野真吾、白形優依、一木隆範
    • Organizer
      第65回応用物理学会春季学術講演会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 集積回路上へのエラストマー製マイクロウェルアレイ形成に関する基礎検討2017

    • Author(s)
      白形優衣、竹原宏明、上野真吾、一木隆範
    • Organizer
      第 64 回応用物理学会春季学術講演会
    • Place of Presentation
      神奈川県横浜市 パシフィコ横浜
    • Year and Date
      2017-03-14
    • Related Report
      2016 Research-status Report
  • [Presentation] ペプチド連結酵素を用いたタンパク質のその場合成・固定化技術2017

    • Author(s)
      若井涼、上野真吾、一木隆範
    • Organizer
      第 64 回応用物理学会春季学術講演会
    • Place of Presentation
      神奈川県横浜市 パシフィコ横浜
    • Year and Date
      2017-03-14
    • Related Report
      2016 Research-status Report
  • [Presentation] 微細加工による医療・創薬のためのバイオデバイス開発2017

    • Author(s)
      一木隆範
    • Organizer
      日本学術振興会将来加工技術 136 委員会
    • Place of Presentation
      東京都千代田区 弘済会館
    • Year and Date
      2017-02-03
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] がんを見つける未来の血液診断装置-予防医療を目指して2017

    • Author(s)
      一木隆範
    • Organizer
      Tonomachi Cafe
    • Place of Presentation
      神奈川県川崎市 ナノ医療イノベーションセンター
    • Year and Date
      2017-01-27
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] Spatiotemporal phototriggered control of biochemical reactions for on-chip ultrahigh-throughput screening of enzyme activities2017

    • Author(s)
      Shingo Ueno, Takanori Ichiki
    • Organizer
      The 21th International Conference on Miniaturized Systems for Chemistry and Life Sciences
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] In situ covalent immobilization of protein on a chip by sortase-mediated peptide ligation2017

    • Author(s)
      Ryo Wakai, Shingo Ueno, Takanori Ichiki
    • Organizer
      The 21th International Conference on Miniaturized Systems for Chemistry and Life Sciences
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Photo-assisted control of the initiation of enzyme reaction2017

    • Author(s)
      Shingo Ueno, Shusuke Sato, Takanori Ichiki
    • Organizer
      34rd International Conference of Photopolymer Science and Technology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 人工生体分子創製を目的とした高集積マイクロウェルアレイシステム2017

    • Author(s)
      上野真吾、佐藤秀介、塩谷美夏、飯塚怜、ジェーンアンキタ、若井涼、白形優
    • Organizer
      理研/iCONM/物材機構 医工学ネットワーク
    • Related Report
      2017 Annual Research Report
  • [Presentation] マイクロアレイでの分子セレクション技術の開発2017

    • Author(s)
      上野真吾、佐藤秀介、若井涼、塩谷美夏、一木隆範
    • Organizer
      生命科学系学会合同年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Fundamental study for quantitative screening of mutant proteins on a glass-made microwell array chip2017

    • Author(s)
      Shusuke Sato, Ankita Jain, Hiromi Kuramochi, Shingo Ueno, Takanori Akagi, Takanori Ichiki
    • Organizer
      第 27 回日本 MRS 年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Development of quantitative aptamer screening using a microarray chip2017

    • Author(s)
      Ankita Jain, Shingo Ueno, Shusuke Sato, Takanori Ichiki
    • Organizer
      第 27 回日本 MRS 年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] In situ covalent immobilization of peptide on glass substrate using transpeptidase sortase2017

    • Author(s)
      Ryo Wakai, Shingo Ueno, Takanori Ichiki
    • Organizer
      第 27 回日本 MRS 年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Effects of surface modification of reactor materials on cell-free synthesis2017

    • Author(s)
      Yui Shirakata, Shingo Ueno, Takanori Ichiki
    • Organizer
      第 27 回日本 MRS 年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ペプチド連結酵素sortaseによるタンパク質の基板上固定化技術2017

    • Author(s)
      若井涼, 一木隆範
    • Organizer
      第17回生命科学シンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] 人工分子進化を目的としたマクロアレイシステムの開発2016

    • Author(s)
      上野真吾、佐藤秀介、倉持宏美、ジェーンアンキタ、若井涼、白形優依、赤木貴則、一木隆範
    • Organizer
      電気学会ケミカルセンサ/バイオ・マイクロシステム合同研究
    • Place of Presentation
      東京都文京区 東京大学工学部
    • Year and Date
      2016-12-21
    • Related Report
      2016 Research-status Report
  • [Presentation] 酵素活性のハイスループットスクリーニングのためのマイクロウェルアレイテクノロジー2016

    • Author(s)
      上野真吾、佐藤秀介、一木隆範
    • Organizer
      第26回日本MRS年次大会
    • Place of Presentation
      神奈川県横浜市 横浜情報文化センター
    • Year and Date
      2016-12-20
    • Related Report
      2016 Research-status Report
  • [Presentation] PDMSチップ上で変異体タンパク質の熱安定性を評価する基礎研究2016

    • Author(s)
      佐藤秀介、ジェーンアンキタ、倉持宏美、上野真吾、赤木貴則、一木隆範
    • Organizer
      第26回日本MRS年次大会
    • Place of Presentation
      神奈川県横浜市 横浜情報文化センター
    • Year and Date
      2016-12-20
    • Related Report
      2016 Research-status Report
  • [Presentation] 共有結合によるタンパク質のその場合成・固定化法の開発2016

    • Author(s)
      若井涼、上野真吾、一木隆範
    • Organizer
      第26回日本MRS年次大会
    • Place of Presentation
      神奈川県横浜市 横浜情報文化センター
    • Year and Date
      2016-12-20
    • Related Report
      2016 Research-status Report
  • [Presentation] Development of high-density microarray technology for DNA aptamer screening using self-assembled beads2016

    • Author(s)
      Ankita Jain, Shingo Ueno, Shusuke Sato, Takanori Ichiki
    • Organizer
      33rd International Conference of Photopolymer Science and Technology
    • Place of Presentation
      千葉県幕張市 幕張メッセ国際会議場
    • Year and Date
      2016-06-24
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 医療・創薬応用を目指したバイオデバイス技術2016

    • Author(s)
      一木 隆範
    • Organizer
      新化学技術推進協会 電子情報技術部会 マイクロナノシステムと材料・加工
    • Place of Presentation
      東京都千代田区 公益財団法人 新化学技術推進協会
    • Year and Date
      2016-06-15
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] Large-scale high-density microarray technology for screening of highly diverse protein mutant library2016

    • Author(s)
      Shusuke Sato, Manish Biyani, Shingo Ueno, Ankita Jain, Subhashini Raj Kumal, Hiromi Kuramochi, Takanori Akagi, Takanori Ichiki
    • Organizer
      The 11th Annual IEEE International Conference on Nano/Micro Engineered and Molecular Systems
    • Place of Presentation
      宮城県松島市 松島大観荘
    • Year and Date
      2016-04-17
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 共有結合による基板上へのタンパク質の自発的固定化技術の開発2016

    • Author(s)
      若井 涼、上野 真吾、一木 隆範
    • Organizer
      第63回応用物理学会春季学術講演会
    • Place of Presentation
      東京都目黒区、東京工業大学大岡山キャンパス
    • Year and Date
      2016-03-19
    • Related Report
      2015 Research-status Report
  • [Presentation] Development of functional biomolecules by artificial selection using cell-free system and microarray technology2016

    • Author(s)
      Shingo Ueno, Shusuke Sato, Ankita Jain, Subhashini Raj Kumal, Hiromi Kuramochi, Takanori Akagi, Takanori Ichiki
    • Organizer
      10th Annual symposium on nanobiotechnology
    • Place of Presentation
      Los Angeles, USA
    • Year and Date
      2016-02-04
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Artificial Darwinian selection technology using microarray technique based on microfabrication2016

    • Author(s)
      Shusuke Sato, Ankita Jain, Subhasini Raji Kumal, Hiromi Kuramochi, Shingo Ueno, Takanori Akagi, Takanori Ichiki
    • Organizer
      10th Annual symposium on nanobiotechnology
    • Place of Presentation
      Los Angeles, USA
    • Year and Date
      2016-02-04
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Microarray technology for quantitative aptamer screening2015

    • Author(s)
      Ankita Jain, Shingo Ueno, Shusuke Sato, Takanori Ichiki
    • Organizer
      第25回日本MRS年次大会
    • Place of Presentation
      神奈川県横浜市、横浜市開港記念会館
    • Year and Date
      2015-12-08
    • Related Report
      2015 Research-status Report
  • [Presentation] High-density self-assembled beads microarray technology for high-throughput aptamer screening2015

    • Author(s)
      Ankita Jain, Shusuke Sato, Shingo Ueno, Takanori Ichiki
    • Organizer
      第38回日本分子生物学会年会
    • Place of Presentation
      兵庫県神戸市、神戸ポートアイランド
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report
  • [Presentation] High-density self-assembled bead microarray technology for high-throughput aptamer screening2015

    • Author(s)
      Ankita Jain, Shusuke Sato, Shingo Ueno, Takanori Ichiki
    • Organizer
      The 19th International Conference on minituarized systems for chemistry and life sciences
    • Place of Presentation
      Gyeongju, Korea
    • Year and Date
      2015-10-25
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Book] バイオチップの基礎と応用―原理から最新の研究・開発動向まで―2015

    • Author(s)
      上野真吾、一木隆範
    • Total Pages
      274
    • Publisher
      シーエムシー出版
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-03-29  

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