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Analysis of Cell Response Mechanisms for Plasma Irradiation by Metabolic Model Simulation

Research Project

Project/Area Number 15K13608
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Plasma science
Research InstitutionOsaka University

Principal Investigator

Hamaguchi Satoshi  大阪大学, 工学研究科, 教授 (60301826)

Co-Investigator(Renkei-kenkyūsha) IKUSE Kazumasa  大阪大学, 工学研究科, 特任研究員 (20795778)
Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2015: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywordsプラズマ医療 / 活性酸素 / 酸化ストレス / 代謝反応ネットワーク / 数値シミュレーション / 代謝流速均衡解析 / ゲノムスケール代謝モデル / 大腸菌 / 代謝モデル / 数費シミュレーション / ゲノムスケール
Outline of Final Research Achievements

We have constructed numerical simulation systems to examine the change in metabolic reactions (stress responses) of Escherichia coli (E. coli) under plasma irradiation. E. Coli is one of the most widely studied systems with Genome Scale Metabolic Models (GSMM). With our simulation model that evaluates oxidative stress generated by low-temperature atmospheric-pressure plasmas, we have established a methodology to determine the biological mechanisms for bactericidal effects by plasma application and clarified the inactivation process of E. coli by its change in metabolism caused by oxidative stress.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (33 results)

All 2017 2016 2015 Other

All Int'l Joint Research (10 results) Journal Article (4 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 4 results,  Open Access: 1 results,  Acknowledgement Compliant: 3 results) Presentation (18 results) (of which Int'l Joint Research: 13 results,  Invited: 7 results) Remarks (1 results)

  • [Int'l Joint Research] ブルノ大学(チェコ)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] コメニウス大学(スロバキア)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] ルール・ボフム大学/低温プラズマ研究所(INP Greifswald)(ドイツ)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] エクス・マルセイユ大学(フランス)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] カリフォルニア大学バークレー校(米国)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] マサリク大学(チェコ)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] ルール・ボーフム大学/ライプニッツ研究所 INP グライフスバルト(ドイツ)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] エクス・マルセイユ大学/ストラスブール大学(フランス)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] 中国科学院(中国)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] コメニウス大学(スロバキア)

    • Related Report
      2015 Research-status Report
  • [Journal Article] Plasma-Liquid Interactions: A Review and Roadmap2016

    • Author(s)
      P.J. Bruggeman, M.J. Kushner, S. Hamaguchi et al.
    • Journal Title

      Plasma Sources Sci. Technol.

      Volume: 25 Issue: 5 Pages: 053002-053002

    • DOI

      10.1088/0963-0252/25/5/053002

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] プラズマの医療応用と医療材料の表面処理技術2016

    • Author(s)
      浜口智志
    • Journal Title

      光技術コンタクト

      Volume: 54

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Atmospheric-pressure plasma-irradiation inhibits mouse embryonic stem cell differentiation to mesoderm and endoderm but promotes ectoderm differentiation2016

    • Author(s)
      Taichi Miura, Satoshi Hamaguchi and Shoko Nishihara
    • Journal Title

      J. Phys. D: Appl. Phys.

      Volume: 49

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 高度物理刺激と生体反応(1) ― 第1章 高度物理刺激の生成法と計測・予測 ―2015

    • Author(s)
      佐藤岳彦、金澤誠司、浜口智志、小宮敦樹
    • Journal Title

      機械の研究

      Volume: 67 Pages: 673-683

    • NAID

      40020544576

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] プラズマ照射によるポリスチレン細胞培養皿表面のアミノ基修飾2017

    • Author(s)
      伊藤智子
    • Organizer
      第64回応用物理学会春季学術講演会
    • Place of Presentation
      パシフィコ横浜、神奈川県横浜市
    • Year and Date
      2017-03-14
    • Related Report
      2016 Annual Research Report
  • [Presentation] プラズマ医療: 医療における放電プラズマの活用2017

    • Author(s)
      浜口智志
    • Organizer
      メディカルジャパン 2017大阪 第3回日本医療総合展
    • Place of Presentation
      インテック大阪、大阪府大阪市住之江区
    • Year and Date
      2017-02-15
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] プラズマ医療:医療における放電プラズマ2017

    • Author(s)
      伊藤智子
    • Organizer
      メディカルジャパン 2017大阪 第3回日本医療総合展
    • Place of Presentation
      インテック大阪、大阪府大阪市住之江区
    • Year and Date
      2017-02-15
    • Related Report
      2016 Annual Research Report
  • [Presentation] プラズマ医療研究の現状と将来展望2016

    • Author(s)
      浜口智志
    • Organizer
      第8回プラズマ医療・健康産業シンポジウム
    • Place of Presentation
      産業技術総合研究所・臨海副都心センター 東京都江東区
    • Year and Date
      2016-12-22
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Plasma-based Functionalization of Polystyrene Surfaces of Cell Culture Plates2016

    • Author(s)
      浜口智志
    • Organizer
      AVS 63rd International Symposium & Exhibition
    • Place of Presentation
      Nashville, TN, USA
    • Year and Date
      2016-11-06
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Numerical simulation of the generation of reactive oxygen and nitrogen species (RONS) in water by atmospheric-pressure plasmas and their effects on Escherichia coli (E. coli)2016

    • Author(s)
      浜口智志
    • Organizer
      International Workshop on Advanced Materials and Nanotechnology 2016
    • Place of Presentation
      Ha Noi, Vietnam
    • Year and Date
      2016-11-03
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 水面へのプラズマ照射による気液界面水和電子反応シミュレーション2016

    • Author(s)
      幾世和将
    • Organizer
      第77回応用物理学会秋季学術講演会
    • Place of Presentation
      朱鷺メッセ、新潟県新潟市
    • Year and Date
      2016-09-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] Numerical simulations of plasma-induced metabolic responses of Escherichia coli2016

    • Author(s)
      幾世和将
    • Organizer
      6th International Conference on Plasma Medicine (ICPM6)
    • Place of Presentation
      Bratislava, Slovakia
    • Year and Date
      2016-09-04
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Liquid-Phase Chemically Reactive Species generated by Water Discharges or Atmospheric-Pressure Discharges2016

    • Author(s)
      浜口智志
    • Organizer
      20th International Vacuum Congress (IVC)
    • Place of Presentation
      Busan, Korea
    • Year and Date
      2016-08-21
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Numerical Simulations of Plasma-Generated Reactive Species in Water2016

    • Author(s)
      浜口智志
    • Organizer
      Gordon Research Conference (GRC) Plasma Processing Science
    • Place of Presentation
      Proctor Academy, Andover, NH, USA
    • Year and Date
      2016-07-24
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Plasma-Liquid Interaction2016

    • Author(s)
      浜口智志
    • Organizer
      43rd IEEE International Conference on Plasma Science (ICOPS2016)
    • Place of Presentation
      The Banff Center, Banff, Alberta, Canada
    • Year and Date
      2016-06-20
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Generation and transport of liquid-phase reactive species due to plasma-liquid interaction2016

    • Author(s)
      浜口智志
    • Organizer
      43rd IEEE International Conference on Plasma Science (ICOPS2016)
    • Place of Presentation
      The Banff Center, Banff, Alberta, Canada
    • Year and Date
      2016-06-20
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Dynamics of reactive oxygen species generated in liquid exposed to gas discharges2016

    • Author(s)
      Satoshi Hamaguchi
    • Organizer
      International Conference on Electrical Discharges with Liquids (ICEDL 2016),
    • Place of Presentation
      Kocaeli (Turkey)
    • Year and Date
      2016-03-13
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Surface Modification of Polystyrene Cell Culture Plates by Nitrogen-Hydrogen Plasma Irradiation2015

    • Author(s)
      Kensaku Gotoh
    • Organizer
      37th International Symposium on Dry Process (DPS2015)
    • Place of Presentation
      淡路夢舞台国際会議場(兵庫県・淡路市)
    • Year and Date
      2015-11-05
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Transport of highly reactive oxygen and nitrogen species (RONS) generated by plasma-liquid interaction in water2015

    • Author(s)
      Satoshi Hamaguchi
    • Organizer
      3rd International Symposium on New Plasma and Electrical Discharge Applications and on Dielectric Materials (ISNPEDADM)
    • Place of Presentation
      Saint Gilles Les Bains (France)
    • Year and Date
      2015-10-26
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Analysis of Amino Group Formation on Polystyrene Surfaces by Nitrogen-Hydrogen-Based Plasma Irradiation2015

    • Author(s)
      Kensaku Goto
    • Organizer
      American Vacuum Society (AVS) 62nd International Symposium & Exhibition
    • Place of Presentation
      San Jose (USA)
    • Year and Date
      2015-10-18
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Concentration profiles of chemical species in water exposed to an atmospheric-pressure plasma: numerical study2015

    • Author(s)
      幾世和将
    • Organizer
      22nd International Symposium on Plasma Chemistry
    • Place of Presentation
      Antwerp (Belgium)
    • Year and Date
      2015-07-05
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Transporters of highly reactive species in water exposed to a low-temperature atmospheric pressure plasma2015

    • Author(s)
      浜口智志
    • Organizer
      5th International Symposium on Plasma Biosciences (ISPB2015-5)
    • Place of Presentation
      Jeju (Korea)
    • Year and Date
      2015-06-24
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Remarks] 浜口研究室

    • URL

      http://www.camt.eng.osaka-u.ac.jp/hamaguchi/

    • Related Report
      2016 Annual Research Report 2015 Research-status Report

URL: 

Published: 2015-04-16   Modified: 2022-02-16  

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