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Construction of a new reconstruction system and analysis of dynamic protein secretion machinery

Research Project

Project/Area Number 15K14490
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Biophysics
Research InstitutionNara Institute of Science and Technology

Principal Investigator

Yoshikane Kunihiro  奈良先端科学技術大学院大学, バイオサイエンス研究科, 研究員 (20467616)

Co-Investigator(Renkei-kenkyūsha) TSUKAZAKI Tomoya  奈良先端科学技術大学院大学, バイオサイエンス研究科, 准教授 (80436716)
KONNO Hiroki  金沢大学, バイオAFM先端研究センター, 准教授 (80419267)
Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2015: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords蛋白質 / タンパク質
Outline of Final Research Achievements

Protein secretion machinery transports precursor proteins across membranes with dynamic structural changes. Although the detailed structures of each factor have been reported by X-ray crystallography, it is still unknown how the factors undergo conformational transitions. In this study, we established a new reconstruction system using nanodiscs and observed the nanodiscs by high speed AFM. It is time to analyze the protein secretion using this tool.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (9 results)

All 2017 2016

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (7 results) (of which Int'l Joint Research: 4 results,  Invited: 4 results) Book (1 results)

  • [Journal Article] Tunnel formation inferred from the I form structures of the proton-driven protein secretion motor SecDF2017

    • Author(s)
      Arata Furukawa, Kunihito Yoshikaie, Takaharu Mori, Hiroyuki Mori, Yusuke V. Morimoto, Yasunori Sugano, Shigehiro Iwaki, Tohru Minamino, Yuji Sugita, Yoshiki Tanaka, Tomoya Tsukazaki
    • Journal Title

      Cell Reports

      Volume: 印刷中

    • NAID

      120006226309

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] Snapshots of the proton-driven protein translocation motor2017

    • Author(s)
      Arata Furukawa, Kunihito Yoshikaie, Takaharu Mori, Hiroyuki Mori, Yusuke V. Morimoto, Yasunori Sugano, Shigehiro Iwaki, Tohru Minamino, Yuji Sugita, Yoshiki Tanaka, Tomoya Tsukazaki
    • Organizer
      EMBO conference | Protein translocation and cellular homeostasis
    • Place of Presentation
      Hotel Valamar Lacroma (クロアチア・ドブロブニク)
    • Year and Date
      2017-03-18
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] タンパク質膜透過を駆動するモータータンパク質のスナップショット2017

    • Author(s)
      古川 新, 吉海江 国仁, 森 貴治, 森 博幸, 森本 雄祐, 菅野 泰功, 岩木 薫大, 南野 徹, 杉田 有治, 田中 良樹, 塚崎 智也
    • Organizer
      2017年 生体運動研究合同班会議
    • Place of Presentation
      神戸国際会議場(兵庫県・神戸市)
    • Year and Date
      2017-01-06
    • Related Report
      2016 Annual Research Report
  • [Presentation] Snapshots of a protein translocation motor2016

    • Author(s)
      古川 新, 吉海江 国仁, 森 貴治, 森 博幸, 森本 雄祐, 菅野 泰功, 岩木 薫大, 南野 徹, 杉田 有治, 田中 良樹, 塚崎 智也
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Snapshots of the proton-driven protein translocation motor2016

    • Author(s)
      Arata Furukawa, Kunihito Yoshikaie, Yasunori Sugano, Yoshiki Tanaka, Tomoya Tsukazaki
    • Organizer
      Zing conferences: Protein Secretion in Bacteria Conference 2016
    • Place of Presentation
      Sirata Beach Resort Tampa, Florida. USA
    • Year and Date
      2016-11-09
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Snapshots of a proton-driven protein translocation motor2016

    • Author(s)
      Tomoya Tsukazaki, Kunihito Yoshikaie, Arata Furukawa, Yasunori Sugano, Yoshiki Tanaka
    • Organizer
      The 42nd Naito Conference on In the Vanguard of Structural Biology: Revolutionizing Life Sciences
    • Place of Presentation
      シャトレーゼ ガトーキングダム サッポロ(北海道・札幌市)
    • Year and Date
      2016-10-04
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 新生鎖を膜透過させるSec蛋白質のX線結晶構造解析2016

    • Author(s)
      田中 良樹, 菅野 泰功, 武本 瑞貴, 森 貴治, 古川 新, 吉海江 国仁, 草木迫 司, 熊崎 薫, 鹿島 絢子, 石谷 隆一郎, 杉田 有治, 濡木 理, 塚崎 智也
    • Organizer
      第16回日本蛋白質科学会 年会
    • Place of Presentation
      福岡国際会議場(福岡県・福岡市)
    • Year and Date
      2016-06-06
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] SecDFの構造変化2016

    • Author(s)
      吉海江 国仁, 菅野 泰功, 田中 良樹, 塚崎 智也
    • Organizer
      第13回 21世紀大腸菌研究会
    • Place of Presentation
      グリーンピア南阿蘇(熊本県・南阿蘇村)
    • Year and Date
      2016-06-02
    • Related Report
      2016 Annual Research Report
  • [Book] 生化学 882016

    • Author(s)
      日本生化学会
    • Total Pages
      153
    • Publisher
      国際文献社
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2018-03-22  

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