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Study for establishing a method to optically and cell-specifically manipulate single locus gene expression

Research Project

Project/Area Number 15K14575
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Genetics/Chromosome dynamics
Research InstitutionShiga University of Medical Science (2016-2018)
Kyoto University (2015)

Principal Investigator

Sugi Takuma  滋賀医科大学, 神経難病研究センター, 助教 (70571305)

Co-Investigator(Kenkyū-buntansha) 伊藤 浩史  九州大学, 芸術工学研究院, 准教授 (20512627)
Project Period (FY) 2015-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2017: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2015: ¥390,000 (Direct Cost: ¥300,000、Indirect Cost: ¥90,000)
Keywords線虫 / ゲノム編集 / 光遺伝学 / 記憶・学習 / 行動 / ゲノム編集技術 / 遺伝子発現 / 行動遺伝学 / 生物物理
Outline of Final Research Achievements

In this study, I established a technique, in which a gene expression of a single locus in C. elegans can be modified by genome editing technique in a cell-specific manner. I first expressed VP64 transcriptional activator in several neurons (~10 neurons) of C. elegans. This expression induces glr-1 gene in several neurons, but there were a few neurons on which VP64 has no effect. Therefore, I next tried to directly manipulate the epigenome using TALE-epigenetic factor. In this experiment, I succeeded in inducing the glr-1 expression in the neurons in which TALE-VP64 could not induce its expression. Overall, I proved that these techniques are useful to artificially induce gene expression and epigenome editing of a single locus in a cell-specific manner. Furthermore, I also insist that the techniques are also important to understand the robustness of a single locus. I am now trying to drive the gene expression and epigenome editing in a cell-specific manner by an optical manipulation.

Academic Significance and Societal Importance of the Research Achievements

本手法が単純な遺伝子発現量の操作方法としてだけではなく、特定の神経細胞のクロマチン構造の「ロバストネス」を調べる方法としても有望である可能性がある. また現在, in vivoで光刺激によるエピゲノム操作を行えるように技術拡張しており、将来的に本研究により、C. elegansの記憶・学習機構を人為的に操作することにより、記憶形成に必須のエピゲノムを同定することが期待できる.

Report

(5 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (4 results)

All 2017 2016 2015

All Journal Article (3 results) (of which Peer Reviewed: 2 results) Book (1 results)

  • [Journal Article] Genome Editing of C. elegans.2017

    • Author(s)
      Takuma Sugi
    • Journal Title

      Methods Mol Biol.

      Volume: 1630 Pages: 247-254

    • DOI

      10.1007/978-1-4939-7128-2_20

    • ISBN
      9781493971275, 9781493971282
    • Related Report
      2017 Research-status Report
  • [Journal Article] Nanoscale Mechanical Stimulation Method for Quantifying <i>C. elegans</i> Mechanosensory Behavior and Memory2016

    • Author(s)
      Sugi T, Okumura E, Kiso K, Igarashi R
    • Journal Title

      Analytical Sciences

      Volume: 32 Issue: 11 Pages: 1159-1164

    • DOI

      10.2116/analsci.32.1159

    • NAID

      130005278002

    • ISSN
      0910-6340, 1348-2246
    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Genome Editing in C. elegans and Other Nematode Species.2016

    • Author(s)
      Takuma Sugi
    • Journal Title

      International Journal of Moelcular Sciences

      Volume: 26 Issue: 3 Pages: 295-295

    • DOI

      10.3390/ijms17030295

    • NAID

      120005947122

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Book] 論文だけではわからないゲノム編集成功の秘訣 Q&A2015

    • Author(s)
      杉拓磨
    • Total Pages
      268
    • Publisher
      実験医学別冊
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2024-12-25  

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