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Molecular mechanism for the reversible genome modulation

Research Project

Project/Area Number 15K14577
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Genetics/Chromosome dynamics
Research InstitutionNational Institute of Genetics

Principal Investigator

Tanaka Seiji  国立遺伝学研究所, 細胞遺伝研究系, 助教 (50263314)

Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
KeywordsDNA複製 / 複製開始点 / ゲノム安定維持 / 遺伝子増幅 / ARS活性 / CUP1 / DNA複製開始点 / 出芽酵母 / ゲノム安定性
Outline of Final Research Achievements

Usually genome information must be maintained stably over generations for the integrity of the organism. However, some exceptions exist. One example is the CUP1 locus of the budding yeast Saccharomyces cerevisiae, whose copy number changes upon the concentration of copper ion included in the growth medium. Such copy number change might help S. cerevisiae to adapt the environment, however, it also might be a big threat for stable genome maintenance. Therefore, I investigated how this organism keeps these controversial mechanisms. As a first approach, I elucidated how this locus is replicated in the cell cycle and I found that the structure and the mode of regulation of replication origin in the CUP1 locus is very different from that of typical replication origins in S. cerevisiae. This indicate that I found a novel type of replication origin.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (17 results)

All 2016 2015 Other

All Int'l Joint Research (4 results) Journal Article (2 results) (of which Peer Reviewed: 2 results,  Acknowledgement Compliant: 2 results,  Open Access: 1 results) Presentation (10 results) (of which Int'l Joint Research: 3 results,  Invited: 2 results) Book (1 results)

  • [Int'l Joint Research] The State University of New Jersey(米国)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] The Columbia University(米国)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] Columbia University(米国)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] New Jersey Medical School(米国)

    • Related Report
      2015 Research-status Report
  • [Journal Article] Conserved interaction of Ctf18-RFC with DNA polymerase ε is critical for maintenance of genome stability in saccharomyces cerevisiae.2016

    • Author(s)
      Okimoto H, Tanaka S, Araki H, Ohashi E, Tsurimoto T.
    • Journal Title

      Genes Cells.

      Volume: in press Issue: 5 Pages: 482-491

    • DOI

      10.1111/gtc.12356

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] iAID: an improved auxin-inducible degron system for the construction of a 'tight' conditional mutant in the budding yeast Saccharomyces cerevisiae.2015

    • Author(s)
      Tanaka S, Miyazawa-Onami M, Iida T, Araki H.
    • Journal Title

      Yeast

      Volume: 32 Issue: 8 Pages: 567-581

    • DOI

      10.1002/yea.3080

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] Switch-like assembly of preinitiation complex in the initiation of DNA replication2016

    • Author(s)
      田中 誠司
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      横浜市
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Interaction between the replication initiation factor Sld3 and the histone acetyltransferase Esa1 promotes the activation of subset of replication origins in budding yeast2016

    • Author(s)
      Seiji Tanaka
    • Organizer
      The 10th 3R Symposium (International Symposium on DNA Replication, Recombination and Repair)
    • Place of Presentation
      島根県松江市
    • Year and Date
      2016-11-13
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 酵母複製開始点に形成される複製開始前複合体の実体とその集合様式2016

    • Author(s)
      田中 誠司
    • Organizer
      酵母遺伝学フォーラム 第49回研究報告会
    • Place of Presentation
      神戸市
    • Year and Date
      2016-09-11
    • Related Report
      2016 Annual Research Report
  • [Presentation] 真核細胞における染色体DNA複製開始反応とクロマチン制御因子の関わり2016

    • Author(s)
      田中 誠司
    • Organizer
      日本遺伝学会第88回大会
    • Place of Presentation
      静岡県三島市
    • Year and Date
      2016-09-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] 複製開始反応における律速因子の高発現によるサイレンス化拮抗作用2015

    • Author(s)
      大浪 真由美、荒木 弘之、田中 誠司
    • Organizer
      BMB2015
    • Place of Presentation
      神戸市
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report
  • [Presentation] Switch-like assembly of pre-initiation complex in the initiation of DNA replication2015

    • Author(s)
      大浪 真由美、荒木 弘之、田中 誠司
    • Organizer
      DNA複製・組換え・修復ワークショップ
    • Place of Presentation
      静岡県焼津市
    • Year and Date
      2015-10-19
    • Related Report
      2015 Research-status Report
  • [Presentation] 染色体DNA複製開始とクロマチンの関係を考える2015

    • Author(s)
      田中 誠司
    • Organizer
      "国立遺伝学研究所・研究集会 「染色体DNAの安定維持の分子メカニズム」"
    • Place of Presentation
      静岡県三島市
    • Year and Date
      2015-10-01
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 染色体DNA複製開始反応における律速因子の高発現によるサイレンス化拮抗作用2015

    • Author(s)
      大浪 真由美、荒木 弘之、田中 誠司
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      仙台市
    • Year and Date
      2015-09-24
    • Related Report
      2015 Research-status Report
  • [Presentation] Dissection of the initiation reaction of DNA replication in the budding yeast Saccharomyces cerevisiae2015

    • Author(s)
      Seiji Tanaka
    • Organizer
      cold Spring Harbor Laboratory meeting: Eukaryotic DNA Replication & Genome Maintenance 2015
    • Place of Presentation
      Cold Spring Harbor, NY(USA)
    • Year and Date
      2015-09-01
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Dissection of the initiation reaction of DNA replication by systematic chromatin immunoprecipitation2015

    • Author(s)
      Seiji Tanaka
    • Organizer
      EMBO Conference, DNA replication, chromosome segregation and cell division
    • Place of Presentation
      Royal Holloway, University of London, Egham, Surrey TW20 0EX, UK
    • Year and Date
      2015-07-27
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Book] The Initiation of DNA Replication in Eukaryotes2016

    • Author(s)
      S Tanaka, H Araki
    • Publisher
      Springer
    • Related Report
      2015 Research-status Report

URL: 

Published: 2015-04-16   Modified: 2022-02-16  

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