• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Molecular mechanisms to strengthen cold tolerance in Drosophila albomicans

Research Project

Project/Area Number 15K14584
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Evolutionary biology
Research InstitutionTokyo Metropolitan University

Principal Investigator

Tamura Koichiro  首都大学東京, 理工学研究科, 教授 (00254144)

Research Collaborator SETO Yosuke  首都大学東京, 理工学研究科, 特任研究員 (50738614)
NAKAMURA Yo  首都大学東京, 理工学研究科, 大学院生
KIMURA Tomohiko  首都大学東京, 理工学研究科, 大学院生
SUZUKI Yuki  首都大学東京, 理工学系, 卒業研究生
SUZUKI Marina  首都大学東京, 理工学系, 卒業研究生
Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords低温耐性 / 低温順化 / 比較トランスクリプトーム / RNA-seq / 分布拡大 / 環境適応 / アカショウジョウバエ / トランスクリプトーム / 遺伝子発現 / ショウジョウバエ / 遺伝子改変 / 分布域拡大
Outline of Final Research Achievements

Drosophila albomicans was originally distributed in tropical zones in Southeast Asia. However, the distribution was extended to western Japan during the 1980's. It has been known that the cold tolerance was strengthened by an enhanced effect of cold acclimation during the distribution expansion. In this research project, to clarify the genetic mechanisms of cold acclimation to enhance cold tolerance in D. albomicans, the genes whose expression is altered by cold acclimation were identified and compared between D. albomicans and D. melanogaster as well as between different geographic strains of D. albomicans. As the results, we found that only a few genes whose expression is altered by cold acclimation were shared by the two Drosophila species and by the different strains of D. albomicans. Moreover, using the GAL4/UAS system of D. melanogaster, we confirmed that an increase in the Pepck gene expression is responsible for the increase in the cold tolerance via cold acclimation.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (22 results)

All 2016 2015

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (19 results) (of which Int'l Joint Research: 6 results,  Invited: 4 results)

  • [Journal Article] A molecular evolutionary reference for the human variome2016

    • Author(s)
      Liu L, Tamura K, Sanderford M, Gray VE, Kumar S.
    • Journal Title

      Molecular Biology and Evolution

      Volume: 33 Issue: 1 Pages: 245-254

    • DOI

      10.1093/molbev/msv198

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Ancient male recombination shaped genetic diversity of neo-Y chromosome in Drosophila albomicans2016

    • Author(s)
      Satomura K, Tamura K.
    • Journal Title

      Molecular Biology and Evolution

      Volume: 33 Issue: 2 Pages: 367-374

    • DOI

      10.1093/molbev/msv221

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Comprehensive identification of odorant-binding protein genes in the seed fly, Delia platura (Diptera: Anthomyiidae)2015

    • Author(s)
      Ohta S, Seto Y, Tamura K, Ishikawa Y, Matsuo T.
    • Journal Title

      Applied Entomology and Zoology

      Volume: 50 Issue: 4 Pages: 457-463

    • DOI

      10.1007/s13355-015-0353-8

    • NAID

      40020659575

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Presentation] アカショウジョウバエの低温耐性に関する比較transcriptome解析2016

    • Author(s)
      木村友彦,田村浩一郎
    • Organizer
      日本進化学会第18回大会
    • Place of Presentation
      東京工業大学大岡山キャンパス
    • Year and Date
      2016-08-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] Transcriptomic response for cold adaptation in Drosophila2016

    • Author(s)
      Isobe K, Takahashi A, Tamura K
    • Organizer
      Germany & Japan Workshop on Evolutionary Genomics 2016
    • Place of Presentation
      国立遺伝学研究所(静岡県三島市)
    • Year and Date
      2016-03-22
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular phylogenetic analyses using MEGA software.2015

    • Author(s)
      Tamura K
    • Organizer
      International Symposium on Evolutionary Genomics and Bioinformatics 2015
    • Place of Presentation
      Academia Sinica (Taiwan)
    • Year and Date
      2015-11-07
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] ショウジョウバエ抗カビ免疫システムの種間比較解析2015

    • Author(s)
      瀬戸陽介,田村浩一郎
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学(宮城県仙台市)
    • Year and Date
      2015-09-25
    • Related Report
      2015 Research-status Report
  • [Presentation] アカショウジョウバエのNeo-Y染色体の遺伝的多様性2015

    • Author(s)
      里村和浩,田村浩一郎
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学(宮城県仙台市)
    • Year and Date
      2015-09-25
    • Related Report
      2015 Research-status Report
  • [Presentation] キハダショウジョウバエ種内における抗菌ペプチドDrosomycin遺伝子の多様性2015

    • Author(s)
      市川里紗,瀬戸陽介,田村浩一郎
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学(宮城県仙台市)
    • Year and Date
      2015-09-25
    • Related Report
      2015 Research-status Report
  • [Presentation] Pooled RNA-Seqを用いたアカショウジョウバエ適応進化の検出2015

    • Author(s)
      中村遥,田村浩一郎
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学(宮城県仙台市)
    • Year and Date
      2015-09-25
    • Related Report
      2015 Research-status Report
  • [Presentation] 進化パターンの変化による分子系統解析の歪みとデータフィルタリングによるその抑制(2)2015

    • Author(s)
      岩本栄介,田村浩一郎
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学(宮城県仙台市)
    • Year and Date
      2015-09-24
    • Related Report
      2015 Research-status Report
  • [Presentation] 次世代データの系統解析New Technology -プロローグ:次世代系統解析の問題と課題-2015

    • Author(s)
      田村浩一郎
    • Organizer
      日本進化学会第17回大会
    • Place of Presentation
      中央大学(東京都文京区)
    • Year and Date
      2015-08-23
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 抗真菌耐性の異なるショウジョウバエ種間における比較トランスクリプトーム解析2015

    • Author(s)
      瀬戸陽介,田村浩一郎
    • Organizer
      日本進化学会第17回大会
    • Place of Presentation
      中央大学(東京都文京区)
    • Year and Date
      2015-08-20
    • Related Report
      2015 Research-status Report
  • [Presentation] アカショウジョウバエの Neo-Y 染色体の進化における組換えの影響2015

    • Author(s)
      里村和浩,田村浩一郎
    • Organizer
      日本進化学会第17回大会
    • Place of Presentation
      中央大学(東京都文京区)
    • Year and Date
      2015-08-20
    • Related Report
      2015 Research-status Report
  • [Presentation] 進化パターンの変化による分子系統解析の歪みとデータフィルタリングによるその抑制(2)2015

    • Author(s)
      岩本栄介,田村浩一郎
    • Organizer
      日本進化学会第17回大会
    • Place of Presentation
      中央大学(東京都文京区)
    • Year and Date
      2015-08-20
    • Related Report
      2015 Research-status Report
  • [Presentation] キハダショウジョウバエ種内における抗菌ペプチドDrosomycin遺伝子の分子進化2015

    • Author(s)
      市川里紗,瀬戸陽介,田村浩一郎
    • Organizer
      日本進化学会第17回大会
    • Place of Presentation
      中央大学(東京都文京区)
    • Year and Date
      2015-08-20
    • Related Report
      2015 Research-status Report
  • [Presentation] Pooled RNA-Seqを用いたアカショウジョウバエ適応進化の検出2015

    • Author(s)
      中村遥,田村浩一郎
    • Organizer
      日本進化学会第17回大会
    • Place of Presentation
      中央大学(東京都文京区)
    • Year and Date
      2015-08-20
    • Related Report
      2015 Research-status Report
  • [Presentation] Evolution of the immigrans species group revealed by using big sequence data2015

    • Author(s)
      Seto Y and Tamura K
    • Organizer
      SMBE 2015
    • Place of Presentation
      Hofburg Palace (Austria)
    • Year and Date
      2015-07-13
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Failure of phylogenetic tree reconstruction by heterogeneous substitution pattern among lineages and the method for its recovery2015

    • Author(s)
      Iwamoto E, Tamura K
    • Organizer
      SMBE 2015
    • Place of Presentation
      Hofburg Palace (Austria)
    • Year and Date
      2015-07-12
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Ancient male recombination shaped genetic diversity of neo-Y chromosome in Drosophila albomicans2015

    • Author(s)
      Satomura K, Tamura K
    • Organizer
      SMBE 2015
    • Place of Presentation
      Hofburg Palace (Austria)
    • Year and Date
      2015-07-12
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] 集団・進化遺伝学から見た放射線の生物への影響2015

    • Author(s)
      田村浩一郎
    • Organizer
      日本保健物理学会第48回研究発表会
    • Place of Presentation
      首都大学東京荒川キャンパス(東京都荒川区)
    • Year and Date
      2015-07-02
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Ancient male recombination shaped genetic diversity of neo-Y chromosome in Drosophila albomicans2015

    • Author(s)
      Satomura K, Tamura K
    • Organizer
      Evolution 2015
    • Place of Presentation
      Casa Grande Resort (Brazil)
    • Year and Date
      2015-06-26
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research

URL: 

Published: 2015-04-16   Modified: 2018-03-22  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi