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Reconstructing community networks based on time-series analysis of populations

Research Project

Project/Area Number 15K14610
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Ecology/Environment
Research InstitutionRyukoku University

Principal Investigator

Kondoh Michio  龍谷大学, 理工学部, 教授 (30388160)

Co-Investigator(Kenkyū-buntansha) 潮 雅之  京都大学, 生態学研究センター, 科学技術振興機構さきがけ専任研究者(京都大学生態学研究センター連携研究員) (40722814)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2017: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywords時系列解析 / 複雑ネットワーク / 生物多様性 / 安定性解析 / 魚類群集 / 生態学 / 時系列データ解析 / 種間相互作用 / 群集ネットワーク / 非線形動態解析
Outline of Final Research Achievements

We developed a mathematical method, by applying which to time-series data of populations one can estimate presence/absence, strengths and signs of interspecific interactions and evaluate community stability. We confirmed the usefulness of the developed method by applying it to artificial data and experimental data with a few species. The method has been applied to large field data sets, such as of fish community of Maizuru Bay and insect community of British grassland, to detect the dynamics and other characteristics of interaspecific interactions in nature and also to test empirically the complexity-stability effect, which has been predicted only with mathematical modeling.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (34 results)

All 2018 2017 2016 2015 Other

All Int'l Joint Research (6 results) Journal Article (7 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 7 results,  Open Access: 7 results,  Acknowledgement Compliant: 2 results) Presentation (21 results) (of which Int'l Joint Research: 6 results,  Invited: 3 results)

  • [Int'l Joint Research] 国立台湾大学/中央研究院(台湾)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] スクリプス海洋研究所(米国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] National Taiwan University/Academia Sinica(台湾)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] Scripps Institution of Oceanography(米国)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] University of California at San Diego(米国)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] National Taiwan University/Academia Sinica(台湾)

    • Related Report
      2015 Research-status Report
  • [Journal Article] Fluctuating interaction network and time-varying stability of a natural fish community2018

    • Author(s)
      Ushio Masayuki、Hsieh Chih-hao、Masuda Reiji、Deyle Ethan R、Ye Hao、Chang Chun-Wei、Sugihara George、Kondoh Michio
    • Journal Title

      Nature

      Volume: 554 Issue: 7692 Pages: 360-363

    • DOI

      10.1038/nature25504

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Empirical dynamic modeling for beginners2017

    • Author(s)
      Chang Chun-Wei、Ushio Masayuki、Hsieh Chih-hao
    • Journal Title

      Ecological Research

      Volume: 32 Issue: 6 Pages: 785-796

    • DOI

      10.1007/s11284-017-1469-9

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Filling the gaps in ecological studies of socioecological systems2017

    • Author(s)
      I-Ching Chen, Chih-hao Hsieh, Michio Kondoh, Hsing-Juh Lin, Takeshi Miki, Masahiro Nakamura, Takayuki Ohgushi, Jotaro Urabe, Takehito Yoshida
    • Journal Title

      Ecological Research

      Volume: 32 Pages: 873-885

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Establishment of an ecological research network involving Taiwan and Japan: developing a better understanding of ecological phenomena unique to East Asia2017

    • Author(s)
      Masahiro Nakamura, Chih-hao Hsieh, Takeshi Miki, Michio Kondoh
    • Journal Title

      Ecological Research

      Volume: 32 Pages: 779-781

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Food-web complexity, meta-community complexity and community stability2016

    • Author(s)
      Akihiko Mougi and Michio Kondoh
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1 Pages: 24478-24478

    • DOI

      10.1038/srep24478

    • NAID

      120005749760

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Adaptive movement and food-chain dynamics: towards food-web theory without birth–death processes2016

    • Author(s)
      Michio Kondoh, Akihiko mougi, Atsushi Ushimaru, Kensuke Nakata
    • Journal Title

      Theoretical Ecology

      Volume: 9 Issue: 1 Pages: 15-25

    • DOI

      10.1007/s12080-015-0266-8

    • Related Report
      2016 Research-status Report 2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species2015

    • Author(s)
      Masaki Miya et al.
    • Journal Title

      Royal Society open science

      Volume: 2 Issue: 7 Pages: 150088-150088

    • DOI

      10.1098/rsos.150088

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Ecological Networks: Linking the structural complexity to dynamic stability2018

    • Author(s)
      Michio Kondoh
    • Organizer
      International Workshop on Mathematical Biology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 「行動」と「生態」をつなぐ:長期昆虫群集動態の時系列解析2018

    • Author(s)
      川津一隆・潮雅之・Van Veen Frank・近藤倫生,
    • Organizer
      第65回日本生態学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 群集生態学の限界とデータ駆動型アプローチによる解決2018

    • Author(s)
      近藤 倫生, 川津 一隆, 長田 穣, 京極 大助, 潮 雅 之
    • Organizer
      第65回日本生態学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 動態の変化は「本当に」相互作用が原因か?:マメゾウムシ実験系の時系列解析2018

    • Author(s)
      川瀬貴礼・川津一隆・京極大助・長田穣・片山昇・近藤倫生
    • Organizer
      第65回日本生態学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] アズキゾウムシ2系統とヨツモンマメゾウムシの間の繁殖干渉2018

    • Author(s)
      野口 功貴, 京極 大助, 近藤 倫生
    • Organizer
      第65回日本生態学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Food-Web Complexity is Stabilizing in the Presence of Habitat Complexity2017

    • Author(s)
      Akihiko Mougi, Michio Kondoh
    • Organizer
      第64回日本生態学会大会
    • Place of Presentation
      早稲田大学、東京
    • Year and Date
      2017-03-14
    • Related Report
      2016 Research-status Report
  • [Presentation] 成虫期干渉型競争と幼虫期消費型資源競争によって駆動される2種競争系2017

    • Author(s)
      川瀬貴礼, 京極大助, 近藤倫生
    • Organizer
      第64回日本生態学会大会
    • Place of Presentation
      早稲田大学、東京
    • Year and Date
      2017-03-14
    • Related Report
      2016 Research-status Report
  • [Presentation] ヤナギ上の節足動物群集におけるCCM を用いた相互作用ネットワーク解析2017

    • Author(s)
      曽我夏希, 米谷衣代, 川津一隆, 片山昇, 近藤倫生
    • Organizer
      第64回日本生態学会大会
    • Place of Presentation
      早稲田大学、東京
    • Year and Date
      2017-03-14
    • Related Report
      2016 Research-status Report
  • [Presentation] 繁殖干渉の強さは生息密度に依存するか?2017

    • Author(s)
      有川哲平、片山昇、天井弘基、川瀬貴礼、川津一隆、京極大助、近藤倫生
    • Organizer
      第64回日本生態学会大会
    • Place of Presentation
      早稲田大学、東京
    • Year and Date
      2017-03-14
    • Related Report
      2016 Research-status Report
  • [Presentation] 複雑な食物網ほど不安定か~種間相互作用ネットワークを疑う~2017

    • Author(s)
      近藤倫生
    • Organizer
      研究会:ネットワーク科学の生態学への応用
    • Place of Presentation
      京都大学, 京都
    • Year and Date
      2017-01-26
    • Related Report
      2016 Research-status Report
  • [Presentation] Food-Web Complexity is Stabilizing in the Presence of Habitat Complexity2016

    • Author(s)
      Akihiko Mougi, Michio Kondoh
    • Organizer
      第32回個体群生態学会大会
    • Place of Presentation
      札幌
    • Year and Date
      2016-11-03
    • Related Report
      2016 Research-status Report
  • [Presentation] Mathematical and Statistical Modeling to Bridge the Gap between Empirical and Theoretical Research in Ecology2016

    • Author(s)
      Michio Kondoh
    • Organizer
      The annual meeting of the Japanese Society for Mathematical Biology
    • Place of Presentation
      福岡
    • Year and Date
      2016-09-07
    • Related Report
      2016 Research-status Report
  • [Presentation] On Relating the Structure of Interaction Network to the Community Dynamics2016

    • Author(s)
      Michio Kondoh
    • Organizer
      International School and Conference on Networks Science (NetSci2016)
    • Place of Presentation
      The K-Hotel Seoul, Korea
    • Year and Date
      2016-06-02
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 野外生態系での変動する相互作用強度と局所安定性の定量化2016

    • Author(s)
      潮雅之
    • Organizer
      第63回日本生態学会
    • Place of Presentation
      仙台国際センター(仙台)
    • Year and Date
      2016-03-20
    • Related Report
      2015 Research-status Report
  • [Presentation] 群集生態学における種間相互作用論とその限界2016

    • Author(s)
      近藤倫生
    • Organizer
      第63回日本生態学会
    • Place of Presentation
      仙台国際センター(仙台)
    • Year and Date
      2016-03-20
    • Related Report
      2015 Research-status Report
  • [Presentation] 食物網における栄養転換効率の栄養段階依存性~21の水域食物網を比較して~2016

    • Author(s)
      高嶋あやか、近藤倫生
    • Organizer
      第63回日本生態学会
    • Place of Presentation
      仙台国際センター(仙台)
    • Year and Date
      2016-03-20
    • Related Report
      2015 Research-status Report
  • [Presentation] Identifying triggers of general flowering in a tropical lowland forest in Borneo2016

    • Author(s)
      Ushio M
    • Organizer
      ATBC2016 (Association for Tropical Biology and Conservation)
    • Place of Presentation
      Montpellier, France
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Environmental triggers of general flowering in a tropical lowland forest in Borneo2016

    • Author(s)
      Ushio M
    • Organizer
      Annual Meeting of Japan Society for Mathematical Biology
    • Place of Presentation
      九州大学, 福岡
    • Related Report
      2016 Research-status Report
  • [Presentation] Applications of nonlinear time series analysis to microbial ecology studies2015

    • Author(s)
      Masayuki Ushio, Chih-Hao Hsieh, Reiji Masuda, Michio Kondoh
    • Organizer
      Annual Meeting of Japan Society for Microbial Ecology 2015
    • Place of Presentation
      亀城プラザ(土浦)
    • Year and Date
      2015-10-19
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Interspecific interactions, diversity and the stability of a natural fish community2015

    • Author(s)
      Masayuki Ushio, Chih-Hao Hsieh, Reiji Masuda, Ethan Deyle, Hao Ye, Chun-Wei Chang, George Sugihara, Michio Kondoh
    • Organizer
      International Workshop on Development and Applications of Empirical Dynamic Modeling and Forecasting for Nonlinear Systems
    • Place of Presentation
      National Taiwan University(台湾、台北)
    • Year and Date
      2015-09-16
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Ecological Complexity and Community Stability2015

    • Author(s)
      Michio Kondoh
    • Organizer
      2015 Joint Meeting of The 5th China-Japan-Korea Colloquium on Mathematical Biology and The Japanese Society for Mathematical Biology
    • Place of Presentation
      同志社大学(京都)
    • Year and Date
      2015-08-26
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited

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Published: 2015-04-16   Modified: 2022-08-18  

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