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Towards establishment of the isolation method of nuclei from plant germ cells in early developmental stages

Research Project

Project/Area Number 15K14630
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Science in genetics and breeding
Research InstitutionNational Institute of Genetics

Principal Investigator

Nonomura Ken-ichi  国立遺伝学研究所, 実験圃場, 准教授 (10291890)

Co-Investigator(Renkei-kenkyūsha) TSUDA Katsutoshi  国立遺伝学研究所, 実験圃場, 助教 (30756408)
Research Collaborator FUKAI Eigo  新潟大学, 農学部, 助教
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2016: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords植物生殖 / イネ / 核単離 / 植物 / 生殖 / 減数分裂 / INTACT法 / 生殖細胞 / TRAP法 / 細胞単離 / 遺伝子発現
Outline of Final Research Achievements

The gene expression pattern of plant germ cells is different from that of somatic cells in reproductive organs. To explore the difference, a special technique to distinguish and isolate specific cells or nuclei from reproductive somatic cells is required. This study aims to establish the method to enrich DNAs and RNAs from germ cells of rice reproductive organs, using the promoter of germ-cell specific rice gene MEL1 (MEL1p). We succeeded to mark germ cell-nuclei specifically with the fluorescent protein GFP in rice anthers, while the following steps for nuclei and DNA enrichment have required further consideration. For isolation of cell-type specific RNAs, the expression of the ribosomal protein-GFP fusion was toxic in transgenic plants, and then the experiments were canceled. The knowledge obtained in this study shows a possibility that further examinations of conditions will enable us to establish the method for isolation of specific cell-type nuclei from plant reproductive organs.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (5 results)

All 2018 2017 Other

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (2 results) (of which Invited: 2 results) Book (1 results) Remarks (1 results)

  • [Journal Article] EAT1 transcription factor, a non-cell-autonomous regulator of pollen production, activates meiotic small RNA biogenesis in rice anther tapetum2018

    • Author(s)
      Ono Seijiro、Liu Hua、Tsuda Katsutoshi、Fukai Eigo、Tanaka Keisuke、Sasaki Takuji、Nonomura Ken-Ichi
    • Journal Title

      PLOS Genetics

      Volume: 14 Issue: 2 Pages: e1007238-e1007238

    • DOI

      10.1371/journal.pgen.1007238

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Small RNAを介したイネ減数分裂のエピジェネティック制御2017

    • Author(s)
      野々村賢一
    • Organizer
      大阪府立大学植物育種繁殖学特別セミナー
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Small RNAを介したイネ減数分裂のエピジェネティック制御2017

    • Author(s)
      野々村賢一
    • Organizer
      新潟大学農学部セミナー
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Book] Chapter5: Genetic and epigenetic regulation of meiotic fate decision and gametophyte specification in rice, In "Rice genomics, genetics and breeding (Sasaki, Ashikari eds.)"2018

    • Author(s)
      Kenichi Nonomura, Seijiro Ono, Kenji Ueda
    • Total Pages
      27
    • Publisher
      Springer Nature Singapore Pte Ltd.
    • ISBN
      9789811074608
    • Related Report
      2017 Annual Research Report
  • [Remarks] 野々村賢一研究室のホームページ

    • URL

      https://www.nig.ac.jp/labs/ExpFarm/top_j.html

    • Related Report
      2017 Annual Research Report

URL: 

Published: 2015-04-16   Modified: 2019-03-29  

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