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Understanding of molecular mechanisms of stress tolerance of plants regulated by epistatic interactions.

Research Project

Project/Area Number 15K14676
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Plant nutrition/Soil science
Research InstitutionGifu University

Principal Investigator

KOYAMA Hiroyuki  岐阜大学, 応用生物科学部, 教授 (90234921)

Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsストレス耐性 / シロイヌナズナ / エピスタシス / SNPs / 集団遺伝学 / 分子相互作用
Outline of Final Research Achievements

Increasing yield is important target of crop breeding. Recent progress of DNA sequencing technologies, by combination of population genetics, enable to study genetic factors regulating yield. It is important to understand molecular mechanisms of stress tolerance of plants because it is most severe yield limiting factor in various crops. Using high-density SNPs information in Arabidopsis, we analyzed stress tolerance mechanisms (and its mechanisms of variation), by GWAS and analysis of epistatic interactions. Our analysis identified novel mechanisms of stress tolerance, which is regulated by a combination of epistatic interaction of genes.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (2 results)

All 2016

All Journal Article (2 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 2 results,  Acknowledgement Compliant: 1 results)

  • [Journal Article] Transcriptomic variation among six Arabidopsis thaliana accessions identified several novel genes controlling aluminium tolerance.2016

    • Author(s)
      Kusunoki K, Nakano Y, Tanaka K, Sakata Y, Koyama H, Kobayashi Y
    • Journal Title

      Plant, cell & environment

      Volume: 40 Issue: 2 Pages: 249-263

    • DOI

      10.1111/pce.12866

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Joint genetic and network analyses identify loci associated with root growth under NaCl stress in Arabidopsis thaliana.,2016

    • Author(s)
      Yuriko Kobayashi, Lingaraj Sahoo, Hiroyuki Koyama et al.
    • Journal Title

      Plant & Cell Environment

      Volume: 39 Issue: 4 Pages: 918-934

    • DOI

      10.1111/pce.12691

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant

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Published: 2015-04-16   Modified: 2018-03-22  

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