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Development of Thermal Refolding and application for antibody production

Research Project

Project/Area Number 15K14695
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Applied microbiology
Research InstitutionOkayama University

Principal Investigator

Takashi Tamura  岡山大学, 環境生命科学研究科, 教授 (40253009)

Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2017: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2016: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsdisulfide oxidoreductase / Thermus thermophilus / redox tuning / GFP / antibody / redox motif / ジスルフイド架橋 / 高度好熱菌 / 緑色蛍光タンパク質 / リフォールディング / グルタチオン / ジスルフィド異性化酵素 / 変性タンパク質 / 酸化還元電位 / ジスルフィド架橋
Outline of Final Research Achievements

In this research, a novel technique was developed which enabled the refolding of proteins at high temperatures with catalysis by thermostable protein disulfide isomerase. For this purpose a novel reporter protein sfGFP-2SS was invented, which emits green fluorescence depending on restoration of correct S-S bonds to be introduced. The fluorescence can be once vanished by erroneous S-S crosslink upon oxidation under denaturation, but green fluorescence was restored by disulfide isomerase from Thermus thermophilus HB8 in the programmed thermal cycling with redox buffer GSH/GSSG. The invention of Protein Thermal Refolding technique, termed as PTR, was established as a protein version of PCR, leading denatured proteins with abbrenet disulfide bonds to the correct structure with high expectation for recombinant antibody production.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (15 results)

All 2017 2016 2015 Other

All Journal Article (11 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 11 results,  Open Access: 5 results,  Acknowledgement Compliant: 4 results) Presentation (3 results) Remarks (1 results)

  • [Journal Article] Structural and mechanistic insights into homocysteine degradation by a mutant of methionine γ-lyase based on substrate-assisted catalysis2017

    • Author(s)
      Sato D, Shiba T, Yunoto S, Furutani K, Fukumoto M, Kudou D, Tamura T, Inagaki K, Harada S.
    • Journal Title

      Protein Science

      Volume: 26 Issue: 6 Pages: 152-158

    • DOI

      10.1002/pro.3158

    • NAID

      130007628790

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The hyperthermophilic cystathionine γ-synthase from the aerobic crenarchaeon Sulfolobus tokodaii: expression, purification, crystallization and structural insights2017

    • Author(s)
      Sato D, Shiba T, Mizuno S, Kawamura A, Hanada S, Yamada T, Shinozaki M, Yanagitani M, Tamura T, Inagaki K, Harada S
    • Journal Title

      Acta Cryst., F

      Volume: 73 Issue: 3 Pages: 152-158

    • DOI

      10.1107/s2053230x17002011

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A non-radioactive assay for selenophosphate synthetase activity using recombinant pyruvate pyrophosphate dikinase from Thermus thermophilus HB82016

    • Author(s)
      Kamada, S., Okugochi, T., Asano, K., Tobe, R., Mihara, H., Nemoto, M., Inagaki, K., and Tamura, T.
    • Journal Title

      Biosci. Biotechnol. Biochem.

      Volume: 80 Issue: 10 Pages: 1970-1972

    • DOI

      10.1080/09168451.2016.1200458

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Identification and Characterization of the zosA Gene Involved in Copper Uptake in Bacillus subtilis 1682016

    • Author(s)
      Fukuhara, T., Kobayashi, K., Kanayama, Y., Enomoto, S., Kondo, T., Tsunekawa, N., Nemoto, M., Ogasawara, N., Inagaki, K., and Tamura, T.
    • Journal Title

      Biosci. Biotechnol. Biochem

      Volume: 80 Issue: 3 Pages: 600-609

    • DOI

      10.1080/09168451.2015.1107462

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Epistasis effects of multiple ancestral-consensus amino acid substitutions on the thermal stability of glycerol kinase from Cellulomonas sp. NT3060.2016

    • Author(s)
      Fukuda, Y., Abe, A., Tamura, T., Kishimoto, T., Sogabe, A., Akanuma, S., Yamagishi, A., Imada, K., and Inagaki, K
    • Journal Title

      J. Biosci. Bioeng

      Volume: 121 Issue: 5 Pages: 497-502

    • DOI

      10.1016/j.jbiosc.2015.09.011

    • NAID

      40020838799

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Molecular evolution of gas cavity in [NiFeSe] hydrogenases resurrected in silico2016

    • Author(s)
      Takashi Tamura, Naoki Tsunekawa, Michiko Nemoto, Kenji Inagaki, Toshiyuki Hirano, Fumitoshi Sato
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1

    • DOI

      10.1038/srep19742

    • NAID

      120005723278

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] 量子化学計算が解き明かすピリドキサール酵素の反応機構2016

    • Author(s)
      田村 隆
    • Journal Title

      ビタミン

      Volume: 90 Pages: 281-285

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Reactivity of sorbose dehydrogenase from Sinorhizobium sp. 97507 for 1,5-anhydro-D-glucitol.2015

    • Author(s)
      Araki T., Nakatsuka T., Kobayashi F., Watanabe-Ishimaru E., Sanada H., Tamura T., Inagaki K.
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: Epub ahead of print Issue: 7 Pages: 1130-1132

    • DOI

      10.1080/09168451.2015.1012148

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Recombinant expression, molecular characterization and crystal structure of antitumor enzyme, l-lysine α-oxidase from Trichoderma viride.2015

    • Author(s)
      Amano M, Mizuguchi H, Sano T, Kondo H, Shinyashiki K, Inagaki J, Tamura T, Kawaguchi T, Kusakabe H, Imada K, Inagaki K.
    • Journal Title

      J Biochem.

      Volume: 157 Issue: 6 Pages: 1-11

    • DOI

      10.1093/jb/mvv012

    • NAID

      110010000888

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Draft genome sequence of Streptomyces incarnatus NRRL8089, which produces the nucleoside antibiotic sinefungin2015

    • Author(s)
      Oshima, K., Hattori, M., Shimizu, H., Fukuda, K., Nemoto, M., Inagaki, K., and Tamura, T
    • Journal Title

      Genome Announcements

      Volume: 3 Issue: 4

    • DOI

      10.1128/genomea.00715-15

    • NAID

      120005672474

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Molecular Cloning and Characterrization of L-Methionine γ-Lyase from Streptomyces avermitilis.2015

    • Author(s)
      Kudou, D., Yasuda, E., Hirai, Y., Tamura, T., and Inagaki, K.
    • Journal Title

      Journal of Bioscience and Bioengineering

      Volume: Epub ahead of print Issue: 4 Pages: 380-383

    • DOI

      10.1016/j.jbiosc.2015.02.019

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Presentation] 高度好熱菌由来PDIのタンパク質の高温リフォールディング活性2017

    • Author(s)
      平島史崇,倉光成紀,根本理子,稲垣賢二,田村 隆
    • Organizer
      2017年度生命科学系学会合同年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ジスルフィド架橋導入sfGFPを用いた蛍光回復過程の経時変化2016

    • Author(s)
      平島史崇,福山慎也,根本理子,稲垣賢二,田村 隆
    • Organizer
      日本分子生物学会
    • Place of Presentation
      横浜
    • Related Report
      2016 Research-status Report
  • [Presentation] ジスルフィド架橋導入sfGFPを用いた高温リフォールディング評価法2015

    • Author(s)
      福山慎也,森野智美,根本理子,稲垣賢二,田村 隆
    • Organizer
      日本分子生物学会
    • Place of Presentation
      神戸
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report
  • [Remarks] 微生物遺伝子化学研究室web site

    • URL

      http://www.agr.okayama-u.ac.jp/ApplEnz/

    • Related Report
      2017 Annual Research Report

URL: 

Published: 2015-04-16   Modified: 2019-12-27  

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