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Biosynthetic enzymes for streptothricin group antibiotic

Research Project

Project/Area Number 15K14724
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Bioorganic chemistry
Research InstitutionFukui Prefectural University

Principal Investigator

Hamano Yoshimitsu  福井県立大学, 生物資源学部, 教授 (50372834)

Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywordsペプチド結合 / tRNA / 生合成 / 二次代謝産物 / ペプチド
Outline of Final Research Achievements

The antibiotic streptothricin (ST) possesses an amino sugar bound to an L-β-lysine (β-Lys) residue via a peptide bond. The peptide-bond formation has been shown to be catalyzed by a nonribosomal peptide synthetase (NRPS) during ST biosynthesis. The focus of this study is the closely related ST analogue BD-12, which carries a glycine-derived side chain rather than a β-Lys residue. In the biosynthetic studies of BD-12, we revealed that the peptide bond between the amino sugar and the glycine residue is catalyzed by a Fem-like enzyme (Orf 11) in a tRNA-dependent manner rather than by an NRPS; Orf 11 utilizes Gly-tRNA as a substrate.
From a genome database, we further identified the enzyme (Sba18) homologous to Orf11 and investigated the substrate specificity. Interestingly, Sba18 was found to accept Ala-tRNA and Ser-tRNA as well as Gly-tRNA, producing new ST-related compounds which carry alanine and serine side chains.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (8 results)

All 2016 2015

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (7 results)

  • [Journal Article] tRNA-dependent aminoacylation of an amino sugar intermediate in the biosynthesis of a streptothricin-related antibiotic2016

    • Author(s)
      Maruyama, C., Niikura, H., Izumikawa, M., Hashimoto, J., Shin-ya, K., Komatsu, M., Ikeda, H., Kuroda, M., Sekizuka, T., Ishikawa, J., Hamano, M.
    • Journal Title

      Appl. Environ. Microbiol.

      Volume: 82 Issue: 12 Pages: 3640-3648

    • DOI

      10.1128/aem.00725-16

    • Related Report
      2016 Annual Research Report 2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] ストレプトスリシン類縁生合成遺伝子群に見出したAla-tRNAAla依存型ペプチド合成酵素の機能解析2016

    • Author(s)
      松田貫暉,丸山千登勢,橋本絢子,新家一男,濱野吉十
    • Organizer
      2016年度日本生物工学会大会
    • Place of Presentation
      富山国際会議場(富山市)
    • Year and Date
      2016-09-28
    • Related Report
      2016 Annual Research Report
  • [Presentation] 抗生物質BD-12生合成に関与するN-メチル基転移酵素の機能解析2016

    • Author(s)
      新倉春香,丸山千登勢,新家一男,濱野吉十
    • Organizer
      2016年度日本生物工学会大会
    • Place of Presentation
      富山国際会議場(富山市)
    • Year and Date
      2016-09-28
    • Related Report
      2016 Annual Research Report
  • [Presentation] ストレプトスリシン類縁生合成遺伝子群に見出したAla-tRNAAla依存型ペプチド合成酵素の機能解析2016

    • Author(s)
      松田貫暉,丸山千登勢,橋本絢子,新家一男,濱野吉十
    • Organizer
      2016年度日本放線菌学会大会
    • Place of Presentation
      東京大学農学部(東京都文京区)
    • Year and Date
      2016-09-08
    • Related Report
      2016 Annual Research Report
  • [Presentation] BD-12生合成におけるN-formimidoyl基転移酵素の酵素学的諸性質2016

    • Author(s)
      新倉春香,丸山千登勢,泉川美穂,新家一男,濱野吉十
    • Organizer
      日本農芸化学会2016年度大会
    • Place of Presentation
      札幌市コンベンションセンター(北海道、札幌市)
    • Year and Date
      2016-03-27
    • Related Report
      2015 Research-status Report
  • [Presentation] ストレプトスリシン類縁生合成遺伝子群に見出したAla-tRNA依存型ペプチド合成酵素の機能解析2016

    • Author(s)
      松田貫暉,丸山千登勢,橋本絢子,新家一男,濱野吉十
    • Organizer
      日本農芸化学会・中部支部・第177回例会
    • Place of Presentation
      名古屋大学農学部(名古屋市)
    • Related Report
      2016 Annual Research Report
  • [Presentation] 抗生物質BD-12生合成遺伝子の機能解析2015

    • Author(s)
      新倉春香, 丸山千登勢, 泉川美穂, 石川淳, 池田治生, 新家一男, 濱野吉十
    • Organizer
      2015年度日本生物工学会大会
    • Place of Presentation
      城山観光ホテル(鹿児島県、鹿児島市)
    • Year and Date
      2015-10-26
    • Related Report
      2015 Research-status Report
  • [Presentation] 抗生物質BD-12生合成遺伝子の機能解析2015

    • Author(s)
      新倉春香,丸山千登勢,泉川美穂,石川淳,池田治生,新家一男,濱野吉十
    • Organizer
      2015年度日本放線菌学会大会
    • Place of Presentation
      富山国際会議場(富山県、富山市)
    • Year and Date
      2015-09-07
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2018-03-22  

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