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Expoloring life cycle of picoeukaryotic algae using TSA-FISH method

Research Project

Project/Area Number 15K14784
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Aquatic bioproduction science
Research InstitutionFisheries Research and Education Agency

Principal Investigator

Kuwata Akira  国立研究開発法人水産研究・教育機構, 東北区水産研究所, グループ長 (40371794)

Research Collaborator Yamada Kazumasa  
Ichinomiya Mutsuo  
Tanaka Atsuko  
Massana Ramon  
Forn Irene  
Jewson David  
Cros Lluisa  
Manuel José Manuel Fortuño Jose  
Estrada Marta  
Delgado Maximinimo  
Project Period (FY) 2015-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2017: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2016: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2015: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywordsプランクトン / ピコ真核藻類 / 生活史 / パルマ藻 / 珪藻 / 海洋生態学
Outline of Final Research Achievements

To understand ecology of each picoeukaryotic algal group, identifying individual picoeukaryotic algal cells at class, order or genus level is necessary. In this study, we focused on Parmales, a group of silicified picoeukaryotic algae, and established a TSA-FISH method for visualizing individual cells of this algal group under an epifluorescence microscope. This algal group have been revealed to have two different life cycle stages, silicified cells and naked flagellated cells. To distinguish these life cycle stages, a labelling method of the silicified cells using a fluorescent dye was also developed. We applied these methods for natural seasonal samples. Additionally, we revealed specific life cycle of a pico-sized centric diatom, Minidiscus by SEM observation of natural samples.

Academic Significance and Societal Importance of the Research Achievements

近年ピコ真核藻類の海洋の物質循環における重要性および多様性の高さが明らかとなってきいるが、グループ・個体群レベルの生態、生活史等の情報は未だにほとんど不明である。本研究のTSA-FISH法を用いたピコ真核藻類の細胞レベルでの識別法によりピコ真核藻類のグループ・個体群レベルでの生態研究が可能となった。また、ピコ真核藻類の生活史の実態をパルマ藻とピコサイズの珪藻で初めて捉えることができた。

Report

(5 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (25 results)

All 2019 2018 2017 2016 2015 Other

All Int'l Joint Research (6 results) Journal Article (8 results) (of which Int'l Joint Research: 7 results,  Peer Reviewed: 8 results,  Open Access: 7 results,  Acknowledgement Compliant: 3 results) Presentation (10 results) (of which Int'l Joint Research: 4 results,  Invited: 1 results) Book (1 results)

  • [Int'l Joint Research] スペイン海洋科学研究所 (CSIC)(スペイン)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] ロスコフ生物研究所(CNRS)(フランス)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] Institut de Ciencies del Mar (CSIC)(スペイン)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] スペイン海洋科学研究所(CSIC)(スペイン)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] スペイン海洋科学研究所(CSIC)(スペイン)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] ロスコフ生物研究所(CNRS)(フランス)

    • Related Report
      2015 Research-status Report
  • [Journal Article] Parmales abundance and species composition in the waters surrounding Hokkaido, North Japan2019

    • Author(s)
      Mutsuo Ichinomiya, Kazumasa Yamada, Yoshizumi Nakagawa, Yasuto Nishino, Hiromi Kasai, Akira Kuwata
    • Journal Title

      Polar Science

      Volume: 18 Pages: 130-136

    • DOI

      10.1016/j.polar.2018.08.001

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Bolidophyceae, a Sister Picoplanktonic Group of Diatoms ? A Review2018

    • Author(s)
      Kuwata Akira、Yamada Kazumasa、Ichinomiya Mutsuo、Yoshikawa Shinya、Tragin Margot、Vaulot Daniel、Lopes dos Santos Adriana
    • Journal Title

      Frontiers in Marine Science

      Volume: 5 Pages: 1-17

    • DOI

      10.3389/fmars.2018.00370

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Ontogenetic analysis of siliceous cell wall formation in Triparma laevis f. inornata (Parmales, Stramenopiles)2018

    • Author(s)
      Yamada Kazumasa、Katsura Hirotaka、No?l Mary-H?l?ne、Ichinomiya Mutsuo、Kuwata Akira、Sato Shinya、Yoshikawa Shinya
    • Journal Title

      Journal of Phycology

      Volume: 55 Issue: 1 Pages: 196-203

    • DOI

      10.1111/jpy.12800

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] 培養株確立によって明らかとなってきた未知の藻類:パルマ藻2017

    • Author(s)
      一宮睦雄,桑田 晃
    • Journal Title

      藻類: Jpn. J. Phycol.

      Volume: 65 Pages: 153-158

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Morphological adaptations to small size in the marine diatom Minidiscus comicus.2016

    • Author(s)
      Jewson D, Kuwata A, Cros L, Fortuno JM, Estrada M
    • Journal Title

      Scientia Marina

      Volume: 80 Pages: 89-96

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] The ecology of plankton in biological oceanography: a tribute to Marta Estrada’s task2016

    • Author(s)
      Jordi Sole, Elisa Berdalet, Laura Arin, Lluisa Cros, Maximino Delgado, Akira Kuwata, Clara Llebot, Celia Marrase
    • Journal Title

      Scientia Marina

      Volume: 80 Pages: 33-38

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms2016

    • Author(s)
      Ichinomiya M., Lopes A., Gourvil .P, Yoshikawa S., Kamiya M., Ohki K., Audic S., Vargas C., Noel M., Vaulot D., Kuwata A.
    • Journal Title

      ISME Journal

      Volume: 印刷中

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Morphological adaptations to small size in the marine diatom Minidiscus comicus2016

    • Author(s)
      Jewson, D. , Kuwata A, Cros L., Fortuno JM, Estrada M.
    • Journal Title

      Scientia Marina

      Volume: 印刷中

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] パルマ藻の殻形成に関する形態学的解析2019

    • Author(s)
      吉川伸哉、山田和正、桂大貴、一宮睦雄、桑田 晃、佐藤晋也
    • Organizer
      日本藻類学会第43回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Morphology, phylogeny and whole genome sequence of a hitherto undescribed scaly Parmales, a reminiscent of pre-diatom?2018

    • Author(s)
      佐藤晋也、吉川伸哉、南雲保、出井雅彦、桑田 晃、一宮睦雄
    • Organizer
      25th International Diatom Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 親潮域における真核ピコ藻類パルマ藻群集の種組成と増殖速度の季節変動2018

    • Author(s)
      山田和正、斉藤柚香、一宮睦雄、谷内 由貴子、黒田 寛、葛西 広海、田中 雄大、長谷川 大介、岡崎 雄二、筧 茂穂、桑田 晃
    • Organizer
      2018年度日本プランクトン学会・日本ベントス学会合同大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] ラビリンチュラ類に対するCARD-FISH法による検出法の検討2017

    • Author(s)
      森 留菜、庄野 孝範、浜本 洋子、桑田 晃、本多 大輔
    • Organizer
      日本藻類学会第41回大会
    • Place of Presentation
      高知大学(高知県・高知市)
    • Year and Date
      2017-03-24
    • Related Report
      2016 Research-status Report
  • [Presentation] Biology of a picoeukaryotic phytoplankton, Parmales(Bolidophyceae), a sister group of diatoms2017

    • Author(s)
      桑田 晃,一宮睦雄,吉川伸哉,山田和正,河地正伸,Mary-Helene Noel,斉藤 憲治,中村 洋路,沢田健,Adriana Lopes dos Santos,Daniel Vaulot
    • Organizer
      The IVth International Conference "Molecular Life of Diatoms"
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] 珪藻の進化・繁栄の謎を握る未知の藻類:パルマ藻の多様性と全球分布2017

    • Author(s)
      桑田 晃,一宮睦雄,吉川伸哉,Daniel Vaulot,Adriana Lopes dos Santos
    • Organizer
      日本植物学会第81回大会
    • Related Report
      2017 Research-status Report
  • [Presentation] Biology of a picoeukaryotic phytoplankton, Parmales, a sister group of diatoms2016

    • Author(s)
      Kuwata A.
    • Organizer
      EMBO | EMBL Symposium: A New Age of Discovery for Aquatic Microeukaryotes
    • Place of Presentation
      Heidelberg (Germany)
    • Year and Date
      2016-01-27
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] 珪藻の姉妹群パルマ藻とボリド藻の多様性と全球分布2015

    • Author(s)
      桑田 晃, 一宮睦雄, 吉川伸哉, Adriana Lopes, Daniel Vaulot
    • Organizer
      日本海洋学会2015年度秋季大会
    • Place of Presentation
      愛媛大学(愛媛県・松山市)
    • Year and Date
      2015-09-29
    • Related Report
      2015 Research-status Report
  • [Presentation] パルマ藻から珪藻の進化の秘密を探る2015

    • Author(s)
      桑田晃、佐藤晋也
    • Organizer
      日本進化学会第17回大会
    • Place of Presentation
      中央大学後楽園キャンパス(東京都・文京区)
    • Year and Date
      2015-08-20
    • Related Report
      2015 Research-status Report
  • [Presentation] Exploring the evolutionary link between Parmales and the success of diatoms in marine ecosystems2015

    • Author(s)
      Kuwata A.
    • Organizer
      Gordon Research Conference "Marine Molecular Ecology"
    • Place of Presentation
      Hong Kong (China)
    • Year and Date
      2015-08-05
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Book] Ecology and evolution of marine diatoms and Parmales. In Marine Protists: Diversity and Dynamics2016

    • Author(s)
      Kuwata A., Jewson D.
    • Publisher
      Springer
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2020-03-30  

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