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Analyses of structural rearrangements of membrane proteins by fluorescent unnatural amino acid scanning

Research Project

Project/Area Number 15K15036
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field General physiology
Research InstitutionNational Institute for Physiological Sciences

Principal Investigator

KUBO Yoshihiro  生理学研究所, 分子細胞生理研究領域, 教授 (80211887)

Research Collaborator Tsari Andriani Rizki  生理学研究所, 分子細胞生理研究領域, 大学院生
Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords蛍光非天然アミノ酸 / P2X2 / ATP受容体チャネル / 動的構造変化 / ATP受容体 / イオンチャネル / 非天然蛍光アミノ酸 / 光学解析
Outline of Final Research Achievements

An experimental method has attracted attention which approaches structural rearrangement of membrane proteins by detecting the fluorescent intensity change of fluorescent unnatural amino acid incorporated at the position of stop codon introduced by mutation. We first optimized its various experimental conditions and then applied it to the ATP and voltage gated structural rearrangements of ATP receptor channel P2X2. We observed the followings. (1) ATP evoked structural rearrangements occur globally at various parts of P2X2. (2) At Ser54 in the transmembrane region 1, the fluorescent intensity change was much slower than the current activation upon ATP application, suggesting secondary structural rearrangements such as pore dilation. (3) Fluorescent change associated with voltage dependent gating was observed at T339 in the transmembrane region 2.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (3 results)

All 2017 2016 2015

All Presentation (3 results)

  • [Presentation] Voltage-clamp fluorometry analyses of the secondary structural rearrangements of ATP-gated P2X2 receptor2017

    • Author(s)
      Andriani RT, Kubo Y
    • Organizer
      第94回日本生理学会大会
    • Place of Presentation
      静岡県、浜松市、アクトシティ浜松
    • Year and Date
      2017-03-28
    • Related Report
      2016 Annual Research Report
  • [Presentation] Analyses of structural rearrangements of P2X2 by voltage-clamp fluorometry using fluorescent unnatural amino acid2016

    • Author(s)
      Andriani Rizki Tsari, Kubo Yoshihiro
    • Organizer
      第93回日本生理学会大会
    • Place of Presentation
      札幌コンベンションセンター(北海道、札幌市)
    • Year and Date
      2016-03-22
    • Related Report
      2015 Research-status Report
  • [Presentation] Signal transmission within the P2X2 trimeric receptor and the voltage dependent structural rearrangements2015

    • Author(s)
      Yoshihiro Kubo
    • Organizer
      The 5th International Ion Channel Conference
    • Place of Presentation
      Luzhou Convention Center (Luzhou, China)
    • Year and Date
      2015-06-29
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2018-03-22  

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