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Development of a cell preparation method for CNV analysis

Research Project

Project/Area Number 15K15099
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Human pathology
Research InstitutionYamaguchi University

Principal Investigator

SASAKI Kohsuke  山口大学, その他部局等, 名誉教授 (80116722)

Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2016: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2015: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywordsがん発症感受性 / コピー数多型 / 細胞遺伝学 / FISH / 散発性がん / コピー数多型(CNV) / 疾患感受性 / イメージサイトメトリー / 遺伝子多型
Outline of Final Research Achievements

CNVs (copy number variations) have recently drawn attention as a reliable marker of cancer susceptibility. Indeed, it has been accumulated as evidence that certain CNVs affect cancer susceptibility in individuals. Different CNVs are associated with different cancers and at present, CNVs associated with cancer susceptibility are successively reported. However, simple and inexpensive methods for analyzing CNVs in individuals are not yet available. In this project, we tried to develop a new interphase cytogenetic method to meet these requests. An analysis of CNVs in individuals becomes very simple and easy if CNV signals in FISH (fluorescence in situ hybridization) are larger and brighter than those in conventional FISH preparations. The long treatment with formamide followed by treatment with pepsin made FISH signals large and bright. This method can be applied to practical use for estimation of cancer susceptibility in individuals.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (5 results)

All 2017 2016 2015

All Journal Article (5 results) (of which Peer Reviewed: 5 results,  Acknowledgement Compliant: 1 results,  Open Access: 1 results)

  • [Journal Article] Germline DNA copy number variations as a potential prognostic marker for progression of non-muscle invasive bladder cancer2017

    • Author(s)
      Yamamoto Y, Sasaki K, et al.
    • Journal Title

      Oncology Rep

      Volume: 印刷中

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] The estimation of gastric cancer disease status using array-based comparative genomic hybridization for endoscopic biopsy specimens: preliminary experience (CGH for gastric cancer biopsy).2016

    • Author(s)
      Yanai H, Furuya T, Furuya T, Hayashi H, Sasaki K.
    • Journal Title

      J Transl Med Res

      Volume: 21 Pages: 9-12

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] デジタルパソロジーの教育への応用2016

    • Author(s)
      佐々木功典、小賀厚徳
    • Journal Title

      病理と臨床

      Volume: 34 Pages: 61-67

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The estimation of gastric cancer disease status using array-based comparative genomic hybridization for endoscopic biopsy specimens: preliminary experience (CGH for gastric cancer biopsy)2016

    • Author(s)
      Yanai H, Furuya T, Furuya T, Hayashi H, Sasaki K
    • Journal Title

      J Transl Med Res

      Volume: 21 Pages: 9-12

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] CNVs associated with susceptibility to cancers: A mini-review.2015

    • Author(s)
      Furuya T, Suehiro Y, Namiki Y, Sasaki K.
    • Journal Title

      J Cancer Therapy

      Volume: 6 Issue: 05 Pages: 413-422

    • DOI

      10.4236/jct.2015.65044

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access

URL: 

Published: 2015-04-16   Modified: 2018-03-22  

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