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Genetic analysis of novel microorganisms detected from bronchial lavage fluid of patients with chronic lower respiratory tract infection

Research Project

Project/Area Number 15K15136
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Bacteriology (including mycology)
Research InstitutionUniversity of Occupational and Environmental Health, Japan

Principal Investigator

FUKUDA KAZUMASA  産業医科大学, 医学部, 講師 (40389424)

Co-Investigator(Kenkyū-buntansha) 小川 みどり  産業医科大学, 医学部, 准教授 (40320345)
Co-Investigator(Renkei-kenkyūsha) YAMASAKI Kei  産業医科大学, 医学部, 助教 (50441861)
Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2015: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords新規感染性微生物 / ゲノム解析 / 呼吸器感染症
Outline of Final Research Achievements

The genomic sequence of a novel microorganism IOLA detected from a bronchial lavage fluid (BALF) specimen derived from a chronic lower respiratory tract infection patient was determined without isolating of IOLA with culture methods. The genome of IOLA is extremely small (303,838 bp), and there are only 310 CDSs. The genes involved in cell wall synthesis were not found on the genome. In addition, the phylogenetic analysis of 16S, 23S rRNA gene and 29 universal protein molecules revealed that IOLA is a novel bacterium at phylum level. The results of IOLA specific PCR analyses showed that IOLA was statistically significantly detected only from patients with bacterial infections. IOLA should be categorized in a new linage of bacteria and would be recognized as an infectious organism, not as a commensal bacterium of human.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (2 results)

All 2016 2015

All Presentation (2 results) (of which Invited: 1 results)

  • [Presentation] ヒトの気道に潜む新規微生物のゲノム解析2016

    • Author(s)
      福田和正、小椋義俊、山崎 啓、川波敏則、小川みどり、林 哲也、齋藤光正、谷口初美
    • Organizer
      第89回日本細菌学会総会
    • Place of Presentation
      大阪国際交流センター (大阪府・大阪市)
    • Year and Date
      2016-03-24
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 新規細菌様微生物(IOLA)の呼吸器臨床検体における検出率と遺伝的多様性2015

    • Author(s)
      福田和正、小川みどり、川波敏則、山崎 啓、谷口初美、齋藤光正
    • Organizer
      第68回日本細菌学会九州支部総会
    • Place of Presentation
      別府国際コンベンションプラザ (大分県・別府市)
    • Year and Date
      2015-09-04
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2018-03-22  

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