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Novel roles of PTCs-containing ultraconserved exons in cancer cell growth

Research Project

Project/Area Number 15K15294
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Gastroenterology
Research InstitutionThe University of Tokushima

Principal Investigator

KUWANO Yuki  徳島大学, 大学院医歯薬学研究部(医学系), 助教 (00563454)

Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2016: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2015: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords非コードRNA / 中途ストップコドン / RNA結合タンパク質 / 大腸がん / 選択的スプライシング / 超保存領域 / hnRNP / SRSF
Outline of Final Research Achievements

Alternative splicing of pre-mRNAs generates protein diversity from a limited number of genes.Alternative splicing occurs in a developmental stage-, sex- or tissue-specific manner and in response to the surrounding microenvironment.At the same time, aberrant alternative splicing participates in many genetic and acquired diseases including cancer.
Serine/Arginine splicing factors (SRSFs) family genes contain ultraconserved regions. Several SRSFs generate transcripts which contain pre-mature termination codons (PTCs).Interestingly, these transcripts are not degradiated by NMD in colon cancer cells. The aberrant expression of T-UCRs is posttranscriptionally regulated by miRNA and RNA-binding proteins.
In this study, we show that a nuclear protein, nucleolin regulates nuclear localization of T-UCRs in colon cancer cells.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (11 results)

All 2017 2016 2015

All Journal Article (3 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 3 results,  Open Access: 3 results) Presentation (8 results) (of which Int'l Joint Research: 2 results,  Invited: 1 results)

  • [Journal Article] Homeodomain-Interacting Protein Kinase-2: A Critical Regulator of the DNA Damage Response and the Epigenome2016

    • Author(s)
      Kuwano Y, Nishida K, Akaike Y, Kurokawa K, Nishikawa T, Masuda K, Rokutan K
    • Journal Title

      Int J Mol Sci

      Volume: 17 Issue: 10 Pages: 10-10

    • DOI

      10.3390/ijms17101638

    • NAID

      120006535037

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Serine/arginine-rich splicing factor 7 regulates p21-dependent growth arrest in colon cancer cells2016

    • Author(s)
      Saijo S, Kuwano Y, Masuda K, Nishikawa T, Rokutan K, Nishida K
    • Journal Title

      J Med Invest

      Volume: 63 Issue: 3.4 Pages: 219-226

    • DOI

      10.2152/jmi.63.219

    • NAID

      130005245836

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Ultraconserved region-containing Transformer 2β4 controls senescence of colon cancer cells2015

    • Author(s)
      Kajita K, Kuwano Y, Satake Y, Kano S, Kurokawa K, Akaike Y, Masuda K, Nishida K, Rokutan K
    • Journal Title

      Oncogenesis

      Volume: - Issue: 4 Pages: e213-e213

    • DOI

      10.1038/oncsis.2016.18

    • Related Report
      2016 Annual Research Report 2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Ultraconserved region-containing transformer 2β4 associates with nucleolin and regulates cellular proliferation.2017

    • Author(s)
      Kuwano Y, Satake Y, Nishikawa T, Fujita M, Saijo S, Nishida K, Rokutan K.
    • Organizer
      Protein-RNA Interactions: Keystone symposia
    • Place of Presentation
      Banff (Canada)
    • Year and Date
      2017-02-05
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Serine/arginine-richスプライシング因子SRSFを介したエピジェネティック調節機構2016

    • Author(s)
      桑野由紀、西田憲生、西川達哉、六反一仁
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜 (神奈川県、横浜市)
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Ultraconserved regionを内在するTRA2β4の発現制御と大腸がんの細胞増殖メカニズムの解明2016

    • Author(s)
      西川達哉、桑野 由紀、小玉 美幸、西條早希、田中 裕基、板井 美樹、藤田 絹代、西田 憲生、六反 一仁
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜 (神奈川県、横浜市)
    • Related Report
      2016 Annual Research Report
  • [Presentation] 大腸がん細胞におけるSRSF7を介した新規細胞増殖機構2016

    • Author(s)
      西條早希、西田憲生、狩野静香、田中裕基、桑野由紀、六反一仁
    • Organizer
      第102回日本消化器病学会総会
    • Place of Presentation
      京王プラザホテル(東京都、新宿区)
    • Related Report
      2016 Annual Research Report
  • [Presentation] Ultraconserved regionを内在するTRA2β4を介した細胞周期調節メカニズムの解析2015

    • Author(s)
      小玉美幸、桑野由紀、佐竹譲、狩野静香、藤田絹代、板井美樹、田中裕基、千葉美穂、西田憲生、六反一仁
    • Organizer
      第38回日本分子生物学会
    • Place of Presentation
      神戸ポートアイランド (兵庫県・神戸市)
    • Year and Date
      2015-12-02
    • Related Report
      2015 Research-status Report
  • [Presentation] TRA2β4とnucleolinの相互作用を介した大腸癌細胞増殖メカニズムの解明2015

    • Author(s)
      佐竹譲、桑野由紀、狩野静香、藤田絹代、板井美樹、田中裕基、西田憲生、六反一仁
    • Organizer
      第38回日本分子生物学会
    • Place of Presentation
      神戸ポートアイランド (兵庫県・神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report
  • [Presentation] Ultraconserved region-containing transformer 2β4 inhibits senesces of colon cancer cells.2015

    • Author(s)
      Kuwano Y, Kajita K, Kano S, Satake Y, Fujita M, Itai M, Nishida K, Rokutan K.
    • Organizer
      Cell symposia-Human genomics
    • Place of Presentation
      Singapore (Singapore)
    • Year and Date
      2015-11-08
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] 新規非コードRNA TRA2β4を介した大腸がん悪性化の分子基盤2015

    • Author(s)
      桑野由紀、佐竹譲、狩野静香、藤田絹代、西田憲生、六反一仁
    • Organizer
      第10回臨床ストレス応答学会
    • Place of Presentation
      東京農工大(東京都・小金井市)
    • Year and Date
      2015-11-06
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2018-03-22  

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