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DNA methylation analyses in the human placenta cells

Research Project

Project/Area Number 15K15592
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Obstetrics and gynecology
Research InstitutionTohoku University

Principal Investigator

Arima Takahiro  東北大学, 医学系研究科, 教授 (80253532)

Co-Investigator(Kenkyū-buntansha) 岡江 寛明  東北大学, 医学系研究科, 助教 (10582695)
Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords生殖医学 / エピジェネティクス
Outline of Final Research Achievements

Placental is common as the interface between mother and fetus to obtain nutrients essential for embryonic growth and gene expression is regulated by epigenetic mechanism. DNA methylation is a kind of epigenetic factors and globally reprogrammed after fertilization. Genomic imprinting is also leads to parent-of-origin specific mono-allelic expression of certain genes by DNA methylation (DMR). In this study, we performed genome-wide allelic DNA methylation analyses of human germ cells, blastocyst and purified trophoblast cells from placentas. We found that incomplete demethylation in btastocyst. RNA sequencing-based allelic expression analyses revealed that some of the placenta-specific maternal DMRs were associated with imprinted gene expression. These findings highlight the incomplete erasure of germline DNA methylation in the human placenta, which is important for understanding normal placental development and the pathogenesis of developmental disorders with imprinting effects.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (26 results)

All 2017 2016 2015

All Journal Article (10 results) (of which Peer Reviewed: 8 results,  Open Access: 7 results,  Acknowledgement Compliant: 4 results) Presentation (10 results) (of which Int'l Joint Research: 3 results,  Invited: 3 results) Book (6 results)

  • [Journal Article] Polyunsaturated Fatty Acid Levels in Maternal Erythrocytes of Japanese Women during Pregnancy and after Childbirth.2017

    • Author(s)
      Kawabata T, Kagawa Y, Kimura F, Miyazawa T, Saito S, Arima T, Nakai K, Yaegashi N
    • Journal Title

      Nutrients

      Volume: 9 Issue: 3 Pages: 1-10

    • DOI

      10.3390/nu9030245

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Factors associated with aberrant imprint methylation and oligozoospermia2017

    • Author(s)
      Kobayashi N, Miyauchi N, Tatsuta N, Kitamura A, Okae H, Hiura H, Sato A, Utsunomiya T, Yaegashi N, Nakai K, Arima T
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 42336-42336

    • DOI

      10.1038/srep42336

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Genome-Scale Assessment of Age-Related DNA Methylation Changes in Mouse Spermatozoa.2016

    • Author(s)
      Kobayashi N, Okae H, Hiura H, Chiba H, Shirakata Y, Hara K, Tanemura K, Arima T.
    • Journal Title

      PLoS One

      Volume: 11 Issue: 11 Pages: e0167127-e0167127

    • DOI

      10.1371/journal.pone.0167127

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Incidence of Domestic Violence Against Pregnant Females After the Great East Japan Earthquake in Miyagi Prefecture: The Japan Environment and Children's Study2016

    • Author(s)
      Sakurai K, Nishigori H, Nishigori T, Mizuno S, Obara T, Iwama N, Watanabe Z, Ishikuro M, Tatsuta N, Nishijima I, Sugawara J, Fujiwara I, Arima T, Kuriyama S, Metoki H, Takahashi F, Nakai K, Yaegashi N; Japan Environment & Children’s Study Group
    • Journal Title

      Disaster Med Public Health Prep

      Volume: 27 Issue: 2 Pages: 1-11

    • DOI

      10.1017/dmp.2016.109

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Association between social capital and the prevalence of gestational diabetes mellitus: An interim report of the Japan Environment and Children's Study2016

    • Author(s)
      Mizuno S, Nishigori H, Sugiyama T, Takahashi F, Iwama N, Watanabe Z, Sakurai K, Ishikuro M, Obara T, Tatsuta N, Nishijima I, Fujiwara I, Arima T, Kuriyama S, Metoki H, Nakai K, Inadera H, Yaegashi N; Japan Environment & Children’s Study Group
    • Journal Title

      Diabetes Res Clin Pract

      Volume: 120 Pages: 132-41

    • DOI

      10.1016/j.diabres.2016.07.020

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Allele-specific methylome and transcriptome analysis reveals widespread imprinting in the human placenta2016

    • Author(s)
      Hamada, H., Okae, H., Toh, H., Chiba, H., Hiura, H., Shirane, K., Sato, T., Suyama, M., Yaegashi, N., Sasaki, H. & Arima
    • Journal Title

      The American Journal of Human Genetics

      Volume: 99 Issue: 5 Pages: 1045-1058

    • DOI

      10.1016/j.ajhg.2016.08.021

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] DNA methylation dynamics during early human development2016

    • Author(s)
      Okae H, Arima T
    • Journal Title

      Journal of Mammalian Ova Research

      Volume: 33 Pages: 2-2

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Prevalence and Determinants of Inadequate Use of Folic Acid Supplementation in Japanese Pregnant Women: The Japan Environment and Children's Study (JECS)2016

    • Author(s)
      Obara T, Nishigori H, Nishigori T, Metoki H, Ishikuro M, Tatsuta N, Mizuno S, Sakurai K, Nishijima I, Murai Y, Fujiwara I, Arima T, Nakai K, Mano N, Yaegashi N, Kuriyama S, JECS group
    • Journal Title

      J Matern Fetal Neonatal Med

      Volume: 30 Issue: 5 Pages: 588-593

    • DOI

      10.1080/14767058.2016.1179273

    • Related Report
      2016 Annual Research Report
  • [Journal Article] DNA methylation errors in imprinting disorders and male infertility.2015

    • Author(s)
      Kitamura A, Hiura H, Miyauchi N, Okae H, Chiba H, Arima T.
    • Journal Title

      Congenit Anom (Kyoto)

      Volume: 55 Pages: 133-144

    • Related Report
      2015 Research-status Report
  • [Journal Article] Heterogeneity of the Fatty Acid Composition of Japanese Placentae for Determining the Perinatal Fatty Acid Status: a Methodological Study.2015

    • Author(s)
      Yamazaki I, Kimura F, Nakagawa K, Nakai K, Arima T, Kawabata T, Kagawa Y, Saitoh S, Mizuno S, Yaegashi N, Miyazawa T.
    • Journal Title

      J Oleo Sci.

      Volume: 64 Pages: 905-14

    • NAID

      130005090062

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] ヒト凍結融解胚移植胎盤におけるmicroRNAの網羅的解析2016

    • Author(s)
      樋浦仁、服部裕充、岡江寛明、千葉初音、宮内尚子、北村茜、菊地裕幸、吉田秋仁、有馬隆博
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
  • [Presentation] 繁殖期におけるマウス精子DNAメチル化様式の加齢性変化2016

    • Author(s)
      小林記緒、岡江寛明、樋浦仁、千葉初音、白形芳樹、原健士郎、種村健太郎、有馬隆博
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
  • [Presentation] 分化多能性を持つヒト胎盤栄養膜幹細胞の樹立2016

    • Author(s)
      岡江寛明、有馬隆博
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] ウシ卵胞内卵子の発生能を制御する卵丘細胞シグナルネットワーク2016

    • Author(s)
      杉村智史、岡江寛明、有馬隆博
    • Organizer
      第109回日本繁殖生物学会大会
    • Place of Presentation
      麻布大学(神奈川県相模原市)
    • Year and Date
      2016-09-11
    • Related Report
      2016 Annual Research Report
  • [Presentation] Incomplete reprogramming of germline DNA methylation in the human placenta2016

    • Author(s)
      Arima T, Okae H
    • Organizer
      IHEC Science Days & Annual Meeting 2016
    • Place of Presentation
      Crowne Plaza Brussels-LePalace(Belgian, Brussels)
    • Year and Date
      2016-09-06
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Transcriptome profiling of purified human trophoblast cells2016

    • Author(s)
      Hamada H, Sato T, Okae H, Yaegashi N, and Arima T.
    • Organizer
      63th Annual Scientific Meeting
    • Place of Presentation
      Montreal, QC, Canada
    • Year and Date
      2016-03-16
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] ヒト胚発生におけるエピジェネティクスの変調2015

    • Author(s)
      有馬隆博
    • Organizer
      第33回受精着床学会
    • Place of Presentation
      TFTホール(東京都江東区)
    • Year and Date
      2015-11-26
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] ヒト胎盤におけるインプリント型X染色体不活性化2015

    • Author(s)
      濱田裕貴、岡江寛明、八重樫伸生、有馬隆博
    • Organizer
      第23回日本胎盤学会学術集会
    • Place of Presentation
      JA共済ビル(東京都千代田区)
    • Year and Date
      2015-11-05
    • Related Report
      2015 Research-status Report
  • [Presentation] 子どもの健康と環境に関する全国調査から見えてくるもの2015

    • Author(s)
      有馬隆博
    • Organizer
      第25回日本新生児看護学会
    • Place of Presentation
      マリオス(岩手県盛岡市)
    • Year and Date
      2015-10-24
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] DNA methylation dynamics and regulation of genomic imprinting during human development2015

    • Author(s)
      Okae H, Arima T
    • Organizer
      EMBO Workshop
    • Place of Presentation
      Montreal, QC, Canada
    • Year and Date
      2015-05-06
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Book] 先端医療シリーズ48「臨床医のための最新産科婦人科」2017

    • Author(s)
      濱田裕貴、高橋聡太、服部裕充、有馬隆博
    • Publisher
      先端医療技術研究所
    • Related Report
      2016 Annual Research Report
  • [Book] 生殖補助医療(ART) -胚培養の理論と実際-2017

    • Author(s)
      有馬隆博、樋浦仁、岡江寛明、佐藤晶子
    • Total Pages
      352
    • Publisher
      近代出版
    • Related Report
      2016 Annual Research Report
  • [Book] 産科と婦人科 Vol.84 No.12016

    • Author(s)
      有馬隆博
    • Publisher
      診断と治療社
    • Related Report
      2016 Annual Research Report
  • [Book] Pharma Medica2016

    • Author(s)
      有馬隆博、宮内尚子、北村茜、樋浦仁、岡江寛明、千葉初音
    • Total Pages
      144
    • Publisher
      メディカルレビュー社
    • Related Report
      2016 Annual Research Report
  • [Book] 小児科臨床2015

    • Author(s)
      樋浦仁、宮内尚子、有馬隆博
    • Total Pages
      8
    • Publisher
      日本小児医事出版社
    • Related Report
      2015 Research-status Report
  • [Book] 生命誌ジャーナル2015

    • Author(s)
      有馬隆博
    • Total Pages
      1
    • Publisher
      JT生命誌研究館
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2018-03-22  

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