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Establishment of practical methods for next generation sequence from circulating tumor cells and circulating cell free DNA of oral cancer

Research Project

Project/Area Number 15K15751
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Surgical dentistry
Research InstitutionNational Cancer Center Japan

Principal Investigator

Honda Kazufumi  国立研究開発法人国立がん研究センター, その他部局等, ユニット長 (10260936)

Co-Investigator(Kenkyū-buntansha) MORI Taisuke  国立研究開発法人国立がん研究センター, 中央病院, 医員 (00296708)
YOSHIMOTO Seichi  国立研究開発法人国立がん研究センター, 中央病院, 科長 (00462242)
Project Period (FY) 2015-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2015: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Keywords末梢循環腫瘍細胞 / 口腔がん / バイオマーカー / ゲノム解析
Outline of Final Research Achievements

To select the optimal therapeutic strategy for individual patients with cancer, clarification of the biological behaviorof the tumor using minimal invasive methods is necessary. Circulating tumor cells (CTCs) and circulating cell-free DNA (ctDNA) released into the bloodstream from the primary tumor and metastases reflect the current tumor status. To establish a noninvasive method for identifying mutation status in tumor cells, we tried to develop methods for next-generation sequencing (NGS) from CTCs and ctDNA. CTCs were isolated using a cascading spiral system with patient blood (Hou et al, Scientific Rep. 2013) while ctDNA and DNA extracted from CTCs were analyzed by NGS (Ion PGM; LifeTechnology). Thirty-four patients with gastric, colorectal, esophageal, or head and neck cancers were enrolled in this study. A total of 8-77 CTCs/ml were retrieved from whole blood. Mutation profiles were successfully identified from CTCs and ctDNA obtained from each patient by NGS.

Report

(2 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • Research Products

    (8 results)

All 2016 2015

All Journal Article (4 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 4 results,  Open Access: 4 results,  Acknowledgement Compliant: 3 results) Presentation (4 results) (of which Int'l Joint Research: 4 results,  Invited: 1 results)

  • [Journal Article] Efficacy of adjuvant chemotherapy for non-small cell lung cancer assesed by metastatic potential assocaited with ACTN42016

    • Author(s)
      Miura N, Kamita M, Kakuya T, Fujiwara Y, Tsuta K, Shiraishi H, Takeshita F, Ochiya T, Hirokazu Shoji, Huang W, Ohe Y, Yamada T, Honda K
    • Journal Title

      Oncotarget

      Volume: Apr 21 Issue: 22 Pages: 1-14

    • DOI

      10.18632/oncotarget.8890

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Patterns of recurrence after selective postoperative radiation therapy for patients with head and neck squamous cell carcinoma2016

    • Author(s)
      Murakami N, Matsumoto F, Yoshimoto S, Ito Y, Mori T, Ueno T, Tuchida K, Kashihara T, Kobayashi K, Harada K, Kitaguchi M, Sekii S, Umezawa R, Takahashi K, Inaba K, Igaki H, Itami J
    • Journal Title

      BMC Cancer

      Volume: 16 Issue: 1 Pages: 192-195

    • DOI

      10.1186/s12885-016-2229-x

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Plasma biomarker for detection of early stage pancreatic cancer and risk factors for pancreatic malignancy using antibodies for apolipoprotein-AII isoforms.2015

    • Author(s)
      Honda K, Kobayashi M, Okusaka T, Rinaudo JA, Huang Y, Marsh T, Sanada M, Sasajima Y, Nakamori S, Shimahara M, Ueno T, Tsuchida A, Sata N, Ioka T, Yasunami Y, Kosuge T, Miura N, Kamita M, Sakamoto T, Shoji H, Jung G, Srivastava S, Yamada T.
    • Journal Title

      Scientific Reports

      Volume: Nov 9;5 Issue: 1 Pages: 15921-15921

    • DOI

      10.1038/srep15921

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] The biological role of actinin-4 (ACTN4) in malignant phenotypes of cancer.2015

    • Author(s)
      Honda K
    • Journal Title

      Cell Biosci.

      Volume: Aug 18;5 Issue: 1 Pages: 41-49

    • DOI

      10.1186/s13578-015-0031-0

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] Plasma biomarker for detection of early-stage pancreatic cancer and risk factors for pancreatic malignancy using antibodies for apolipoprotein-AII A2 isoforms2016

    • Author(s)
      Kazufumi Honda, Michimoto Kobayashi, Takuji Okusaka, Chigusa Morizane, Jo Ann Rinaudo, Ying Huang, Tracey Marsh, Shoji Nakamori, Masashi Shimahara, Takaaki Ueno, Akihiko Tsuchida, Naohiro Sata, Tatsuya Ioka, Tomoo Kosuge, Yohichi Yasunami, Masaru Yoshida, Ken Takeshi Azuma, Sudhir i Srivastava, Tesshi Yamada
    • Organizer
      American Society Clinical Oncology (ASCO) Annual Meeting 2016
    • Place of Presentation
      アメリカ
    • Year and Date
      2016-06-04
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Plasma biomarker for detection of early stage pancreatic cancer and risk factors for pancreatic malignancy using antibodies for apolipoprotein-AII isoforms2016

    • Author(s)
      Kazufumi Honda
    • Organizer
      Japan US Workshop for Cancer Research
    • Place of Presentation
      日本
    • Year and Date
      2016-03-21
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Copy number of ACTN4 is a predictive indicator for late metastasis of cervical lymph nodes in early-stage tongue cancer2015

    • Author(s)
      Takanori Kakuya, Taisuke Mori, Yukio Watabe, Seichi Yoshimoto, Nami Miura, Takeshi Nomura, Tesshi Yamada, Huang Wilber, Takahiko Shibahara, Kazufumi Honda
    • Organizer
      the International Conference on Oral and Maxillofacial Surgery 2015
    • Place of Presentation
      オーストラリア
    • Year and Date
      2015-10-27
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Next generation sequencing of circulating tumor cells isolated from the peripheral blood and circulating free DNA of solid cancer patients.2015

    • Author(s)
      Tomohiko Kakizaki, Hirokazu Shoji, Koh Furuta, Ken Kato, Seiichi Yoshimoto, Fumihiko Matsumoto, Taisuke Mori, Tomohiro Sakuma, Tesshi Yamada, Chwee Teck Lim and Kazufumi Honda
    • Organizer
      第74回日本癌学会学術総会
    • Place of Presentation
      愛知県
    • Year and Date
      2015-10-08
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research

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Published: 2015-04-16   Modified: 2017-05-10  

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