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Measurement and control of the group of bacteria in a confined region

Research Project

Project/Area Number 15K17975
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Fluid engineering
Research InstitutionTottori University

Principal Investigator

Nakai Tonau  鳥取大学, 工学(系)研究科(研究院), 准教授 (80452548)

Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2015: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywords細菌 / べん毛 / 集団運動 / 走化性 / 微小領域 / バイオ流体力学 / キャピラリアッセイ / バイオフィルム / 微生物 / 時空間構造 / アクティブマター(自走粒子) / 流動 / ゆらぎ
Outline of Final Research Achievements

The purpose of this study is to understand mechanism of the collective motion in a dense suspension of swimming bacteria and to control the collective motion. Results are as follows: (1) collective motion of bacteria can be confined in a circular pool on an agar medium with the size of 10 micrometers, which is made with ultrafine glass needle operated by a micromanipulator. (2) Accumulating bacteria around the tip of a capillary with an attractant were observed. When a cell swims toward the attractant, frequency of the tumble of a cell decreases (from 0.5 Hz to 0.3 Hz). (3) Motion of microbeads in the bacterial suspension was analyzed. The mean square displacement (MSD) of the microbeads is different from Brownian motion in the sense that the time exponent of the MSD is 1.7 - 1.8, whereas that of a Brownian particle is exactly 1.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (17 results)

All 2017 2016 2015 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results) Presentation (13 results) (of which Int'l Joint Research: 3 results,  Invited: 1 results) Remarks (1 results)

  • [Journal Article] Steady distribution of cells in a one-dimensional biased random walk model of bacterial chemotaxis2016

    • Author(s)
      Tomonobu Goto, Tonau Nakai
    • Journal Title

      Journal of Biomechanical Science and Engineering

      Volume: 11 Issue: 2 Pages: 15-00587-15-00587

    • DOI

      10.1299/jbse.15-00587

    • NAID

      130005159000

    • ISSN
      1880-9863
    • Related Report
      2016 Annual Research Report 2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] "Analysis of the velocity correlation in the collective motion of bacteria", Vol. 4, No. 1, pp.32-36 (2015).2015

    • Author(s)
      Tonau Nakai, Yoshihiro Mouri, Tomonobu Goto
    • Journal Title

      Journal of Aero Aqua Bio-mechanisms

      Volume: 4 Pages: 32-36

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] A One-dimensional Discrete Model of Biased Random Walk Relating to Bacterial Chemo-taxis2015

    • Author(s)
      Tomonobu Goto, Tonau Nakai
    • Journal Title

      Journal of Aero Aqua Bio-mechanisms

      Volume: 4 Pages: 18-24

    • NAID

      130005084257

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] COLLECTIVE MOTION IN A DENSE SUSPENSION OF SWIMMING BACTERIA IN A CONFINED POOL2017

    • Author(s)
      Tonau Nakai, Tomonobu Goto
    • Organizer
      XXVI Congress of the International Society of Biomechanics
    • Place of Presentation
      The Brisbane Convention & Exhibition Centre
    • Year and Date
      2017-07-23
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 細菌の集団運動中における微粒子の運動と周囲の流れとの関係2017

    • Author(s)
      角田裕介,後藤知伸,中井唱
    • Organizer
      日本機械学会 中国四国学生会第47回学生員卒業研究発表講演会
    • Place of Presentation
      広島工業大学
    • Related Report
      2016 Annual Research Report
  • [Presentation] 密集した遊泳細菌がつくる渦構造の計測および微小領域における挙動2017

    • Author(s)
      中井唱,後藤知伸
    • Organizer
      日本機械学会第29回バイオエンジニアリング講演会
    • Place of Presentation
      ウインクあいち
    • Related Report
      2016 Annual Research Report
  • [Presentation] 高密度の細菌懸濁液における微粒子の運動と周囲の細菌運動との関係2017

    • Author(s)
      中井唱,角田裕介,後藤知伸
    • Organizer
      日本機械学会 ロボティクス・メカトロニクス講演会2017
    • Place of Presentation
      パレットふくしま
    • Related Report
      2016 Annual Research Report
  • [Presentation] サルモネラ菌の方向転換における走化性の影響2017

    • Author(s)
      吉野純平,中井唱,後藤知伸
    • Organizer
      エアロ・アクアバイオメカニズム学会 第36回定例講演会
    • Place of Presentation
      千葉大学
    • Related Report
      2016 Annual Research Report
  • [Presentation] 誘引物質のまわりに集まるサルモネラ菌の分布の時間変化2017

    • Author(s)
      梶谷真未,吉野純平,中井唱,後藤知伸
    • Organizer
      日本機械学会 中国四国学生会第47回学生員卒業研究発表講演会
    • Place of Presentation
      広島工業大学
    • Related Report
      2016 Annual Research Report
  • [Presentation] 細菌のらせん型べん毛のバンドル形成に関する数値解析2016

    • Author(s)
      中井 唱
    • Organizer
      日本機械学会ロボティクス・メカトロニクス講演会2016
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2016-06-09
    • Related Report
      2015 Research-status Report
  • [Presentation] 細菌のらせん型べん毛のバンドル形成に関する数値解析2016

    • Author(s)
      中井唱,神田将志,後藤知伸
    • Organizer
      日本機械学会 ロボティクス・メカトロニクス講演会2016
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2016 Annual Research Report
  • [Presentation] Steady Distribution of Cells in One-Dimensional Biased Random Walk Model Relating to Bacterial Chemo-Taxis2015

    • Author(s)
      Tomonobu Goto
    • Organizer
      The 8th Asian-Pacific Conference on Biomechanics
    • Place of Presentation
      北海道大学
    • Year and Date
      2015-09-18
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Observation and Numerical Simulation of the Spatio-Temporal Structure in the Collective Motion of Bacteria2015

    • Author(s)
      Tonau Nakai
    • Organizer
      The 8th Asian-Pacific Conference on Biomechanics
    • Place of Presentation
      北海道大学
    • Year and Date
      2015-09-18
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] 細菌の集団運動により駆動される微粒子のランダム運動2015

    • Author(s)
      中井 唱
    • Organizer
      エアロ・アクアバイオメカニズム学会 第33回定例講演会
    • Place of Presentation
      鳥取大学
    • Year and Date
      2015-09-03
    • Related Report
      2015 Research-status Report
  • [Presentation] 細菌の集団運動により生成される流動パターンの可視化2015

    • Author(s)
      中井 唱
    • Organizer
      可視化情報シンポジウム
    • Place of Presentation
      工学院大学
    • Year and Date
      2015-07-22
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 細菌の集団運動の時空間構造計測と数値シミュレーション2015

    • Author(s)
      中井 唱
    • Organizer
      日本機械学会ロボティクス・メカトロニクス講演会2015
    • Place of Presentation
      みやこめっせ(京都市)
    • Year and Date
      2015-05-18
    • Related Report
      2015 Research-status Report
  • [Remarks] http://www.damp.tottori-u.ac.jp/~lab5/index.html

    • Related Report
      2016 Annual Research Report

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Published: 2015-04-16   Modified: 2018-03-22  

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