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Structural biology of the intrinsically disordered region of CagA

Research Project

Project/Area Number 15K18495
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Structural biochemistry
Research InstitutionHigh Energy Accelerator Research Organization

Principal Investigator

Suzuki Nobuhiro  大学共同利用機関法人高エネルギー加速器研究機構, 物質構造科学研究所, 研究員 (40712659)

Research Collaborator SENDA Toshiya  
SHIMIZU Nobutaka  
HATAKEYAMA Masanori  
TAKEUCHI Koh  
Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywordsピロリ菌 / CagA / 天然変性領域 / 天然変性 / 溶液構造
Outline of Final Research Achievements

CagA is a protein produced by Helicobacter pylori and is known to cause gastric ulcer and gastric cancer. When injected into the target cell by the bacterium, CagA interacts with many different signaling molecules and deregulate the bound targets. CagA is composed of N-terminal structured region and C-terminal intrinsically disordered region. It has been suggested that the intrinsically disordered region forms a loop like structure by intramolecularly interacting with the structured region. Here we performed solution structure analysis of this loop like structure to elucidate the significance of the structure for its function by means of NMR, SAXS, CD analyses and other structural studies with functional analysis. To be noted, CD and NMR analyses revealed that, upon intramolecular interaction between the structured region and intrinsically disordered region, the interaction site in the intrinsically disordered region formed helices likely to form helix bundles with structured region.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (3 results)

All 2017 2016 2015

All Presentation (3 results)

  • [Presentation] ピロリ菌CagA EPIYAセグメントと複合体を形成したSHP2のSAXS解析2017

    • Author(s)
      鈴木 喜大, 林 剛瑠, 千田 美紀, 長瀬 里沙, 畠山 昌則, 千田 俊哉
    • Organizer
      2016年度量子ビームサイエンスフェスタ
    • Place of Presentation
      エポカルつくば(茨城県・つくば市)
    • Year and Date
      2017-03-14
    • Related Report
      2016 Annual Research Report
  • [Presentation] ピロリ菌CagA EPIYA領域と複合体を形成したSHP2の溶液構造解析2016

    • Author(s)
      鈴木 喜大, 林 剛瑠, 千田 美紀, 長瀬 里沙, 畠山 昌則, 千田 俊哉
    • Organizer
      日本分子生物学会
    • Place of Presentation
      パシフィコ横浜(神奈川県・横浜市)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
  • [Presentation] ピロリ菌CagAのC末端天然変性領域による投げ縄様構造の解析2015

    • Author(s)
      鈴木 喜大, 千田 美紀, 長瀬 里沙, 林 剛瑠, 畠山 昌則, 千田 俊哉
    • Organizer
      第38回日本分子生物学会年会/第88回日本生化学会大会 合同大会
    • Place of Presentation
      神戸ポートアイランド(兵庫県・神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2018-03-22  

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