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Reciprocity between robustness and plasticity in the circadian clock

Research Project

Project/Area Number 15K18512
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Biophysics
Research InstitutionThe University of Tokyo

Principal Investigator

Hatakeyama Tetsuhiro  東京大学, 大学院総合文化研究科, 助教 (50733036)

Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2017: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords理論生物物理学 / 頑健性 / 可塑性 / 力学系 / 非線形 / 非線形力学系 / 適応 / ホメオスタシス / システム生物学 / 反応拡散パタン / 時間生物学
Outline of Final Research Achievements

Circadian clocks exhibit the robustness of period and plasticity of phase against environmental changes such as temperature and nutrient conditions. Thus far, however, it is unclear how both are simultaneously achieved. By investigating distinct models of circadian clocks, we demonstrate reciprocity between robustness and plasticity: higher robustness in the period implies higher plasticity in the phase. I demonstrated that the robustness of period is achieved by the adaptation on the limit cycle, which causes reciprocity.
I also found that reciprocity between robustness and plasticity is achieved in a variety of biological phenomena, i.e., spatial pattern formation and gene regulatory dynamics. It suggests that such reciprocity is universal in many biological activities.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (25 results)

All 2018 2017 2016 2015 Other

All Journal Article (5 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 5 results,  Open Access: 5 results,  Acknowledgement Compliant: 3 results) Presentation (19 results) (of which Int'l Joint Research: 10 results,  Invited: 6 results) Remarks (1 results)

  • [Journal Article] Dynamics Robustness of Linear Signaling Cascades2017

    • Author(s)
      J.T.Young, T.S.Hatakeyama, K. Kaneko
    • Journal Title

      PLoS Comp. Biol.

      Volume: 13 Issue: 3 Pages: e1005434-e1005434

    • DOI

      10.1371/journal.pcbi.1005434

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Metabolic dynamics restricted by conserved carriers: Jamming and feedback2017

    • Author(s)
      Hatakeyama Tetsuhiro S.、Furusawa Chikara
    • Journal Title

      PLOS Computational Biology

      Volume: 13 Issue: 11 Pages: e1005847-e1005847

    • DOI

      10.1371/journal.pcbi.1005847

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Robustness and Plasticity in Biological Rhythms2017

    • Author(s)
      畠山哲央、金子邦彦
    • Journal Title

      Seibutsu Butsuri

      Volume: 57 Issue: 4 Pages: 186-190

    • DOI

      10.2142/biophys.57.186

    • NAID

      130005866062

    • ISSN
      0582-4052, 1347-4219
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Robustness of spatial patterns in buffered reaction-diffusion systems and its reciprocity with phase plasticity2017

    • Author(s)
      Tetsuhiro S. Hatakeyama, Kunihiko Kaneko
    • Journal Title

      Physical Review E Rapid Communications

      Volume: 95 Issue: 3 Pages: 030201-030201

    • DOI

      10.1103/physreve.95.030201

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Reciprocity Between Robustness of Period and Plasticity of Phase in Biological Clocks2015

    • Author(s)
      Tetsuhiro S. Hatakeyama and Kunihiko Kaneko
    • Journal Title

      Physical Review Letters

      Volume: 21 Issue: 21 Pages: 218101-218101

    • DOI

      10.1103/physrevlett.115.218101

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] A quantitative law of homeostasis in the gene regulatory network through the evolutionary process2018

    • Author(s)
      Tetsuhiro S. Hatakeyama
    • Organizer
      Evolution of Diversity
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Reciprocity between robustness and plasticity in temporal and spatial pattern formation systems2018

    • Author(s)
      Tetsuhiro S. Hatakeyama
    • Organizer
      Information transmission in biological systems
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Robustness of spatial pattern in buffered reaction-diffusion systems and Its Reciprocity with the Phase Plasticity2017

    • Author(s)
      Tetsuhiro S. Hatakeyama, Kunihiko Kaneko
    • Organizer
      2017 Winter Q-Bio
    • Place of Presentation
      ハワイ(アメリカ)
    • Year and Date
      2017-02-22
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Reciprocity between Robustness and Plasticity in the Biological clock and in the Reaction-diffusion System2017

    • Author(s)
      Tetsuhiro S. Hatakeyama, Kunihiko Kaneko
    • Organizer
      1st Biology for Physics Conference
    • Place of Presentation
      バルセロナ(スペイン)
    • Year and Date
      2017-01-15
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 遺伝子発現ネットワークにおける頑健性と可塑性の進化2017

    • Author(s)
      畠山 哲央
    • Organizer
      日本物理学会 秋季大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Reciprocity between Robustness and Plasticity as a Universal Quantitative Principle in Biology2017

    • Author(s)
      Tetsuhiro S. Hatakeyama
    • Organizer
      EMBO Conference Quantitative Principles in Biology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] アロステリック型生体分子における遅い緩和とKinetically constrained modelとの関わり2017

    • Author(s)
      畠山 哲央
    • Organizer
      日本物理学会第72 回年次大会
    • Place of Presentation
      大阪大学(大阪府・豊中市)
    • Related Report
      2016 Research-status Report
  • [Presentation] Kinetically constrained model in the allosteric biomolecule2017

    • Author(s)
      Tetsuhiro S. Hatakeyama
    • Organizer
      International Workshop on Glasses and Related Nonequilibrium Systems
    • Place of Presentation
      大阪大学(大阪府・大阪市)
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Reciprocity between Robustness of Period and Plasticity of Phase in Biological Oscillators2016

    • Author(s)
      Tetsuhiro S. Hatakeyama, Kunihiko Kaneko
    • Organizer
      STATPHYS26
    • Place of Presentation
      リヨン(フランス)
    • Year and Date
      2016-07-18
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 生物時計における周期の頑健性と位相の可塑性の互恵的関係2016

    • Author(s)
      畠山 哲央
    • Organizer
      生命動態の分子メカニズムと数理
    • Place of Presentation
      広島
    • Year and Date
      2016-03-25
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 生命システムにおける頑健性と可塑性の互恵的関係 ~体内時計を例として~2016

    • Author(s)
      畠山 哲央
    • Organizer
      統計物理学懇談会
    • Place of Presentation
      学習院大学
    • Year and Date
      2016-03-08
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] A Simple Motif of Metabolic Reactions Shows Robustness against Internal and External Fluctuations2016

    • Author(s)
      Tetsuhiro S. Hatakeyama and Chikara Furusawa
    • Organizer
      Annual wInter Q-bio meeting
    • Place of Presentation
      ハワイ
    • Year and Date
      2016-02-17
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Reciprocity between robustness and plasticity as a universal quantitative law in biology2016

    • Author(s)
      Tetsuhiro S. Hatakeyama
    • Organizer
      Lake Como School of Advanced Studies: Quantitative Laws II
    • Place of Presentation
      コモ(イタリア)
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 空間パターン形成における頑健性と可塑性の関係2016

    • Author(s)
      畠山 哲央、金子 邦彦
    • Organizer
      日本物理学会秋季大会
    • Place of Presentation
      金沢大学(石川県・金沢市)
    • Related Report
      2016 Research-status Report
  • [Presentation] Reciprocity between robustness and plasticity in biological oscillators2016

    • Author(s)
      畠山 哲央、金子 邦彦
    • Organizer
      日本生物物理学会第54回年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Related Report
      2016 Research-status Report
  • [Presentation] Dynamic protein phosphorylation as a time “scale” machine2016

    • Author(s)
      畠山 哲央
    • Organizer
      日本生物物理学会第54回年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] 酵素量変化による生命システムの時間スケール制御2015

    • Author(s)
      畠山 哲央
    • Organizer
      BMB2015
    • Place of Presentation
      神戸
    • Year and Date
      2015-12-02
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Reciprocity between robustness of the period and plasticity of the phase2015

    • Author(s)
      Tetsuhiro S. Hatakeyama and Kunihiko Kaneko
    • Organizer
      日本生物物理学会
    • Place of Presentation
      金沢
    • Year and Date
      2015-09-13
    • Related Report
      2015 Research-status Report
  • [Presentation] Reciprocity relationship between robustness of the period and plasticity of the phase2015

    • Author(s)
      Tetsuhiro S. Hatakeyama
    • Organizer
      Models of Life
    • Place of Presentation
      コペンハーゲン
    • Year and Date
      2015-08-15
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Remarks] 【研究発表】生物は変わらないために変わる ~周期が変わらない体内時計が時 刻合わせできる理由を解明~

    • URL

      http://www.c.u-tokyo.ac.jp/info/news/topics/20151125170530.html

    • Related Report
      2015 Research-status Report

URL: 

Published: 2015-04-16   Modified: 2019-03-29  

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