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Analysis of leaf-like flower development in foxtail millet induced by downy mildew

Research Project

Project/Area Number 15K18650
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Plant protection science
Research InstitutionIwate Biotechnology Research Center

Principal Investigator

Kobayashi Michie  公益財団法人岩手生物工学研究センター, ゲノム育種研究部, 研究員 (10751539)

Research Collaborator HIRAKA Yukie  (公財)岩手生物工学研究センター, 技術員
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2017: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords植物病原菌ゲノム / 病原性エフェクター / 感染生理 / エフェクター / べと病菌 / アワ / 植物病原菌のゲノム解析 / 植物病原菌の全ゲノム解読 / 花成抑制因子
Outline of Final Research Achievements

Sclerospora graminicola is an economically important pathogen of foxtail millet. Colonization of the pathogen in panicles triggers a transformation of florets into leafy structures. Whole genome sequencing of S. graminicola revealed that estimated genome size was approx. 360 Mbp and 16736 genes were predicted from the RNA-seq data. Of a total of 1220 genes encoding putative secreted proteins, including a number of Jacalin-related lectin (JRL) proteins in addition to conserved effector-like proteins. A number of JRLs were induced in early infection phase and seven were detected in apoplastic fluids from infected leaves, suggesting that they play roles as apoplastic effector.
In infected panicles, MADS47 expression was significantly increased despite during reproductive phase. On the other hand, some of positive regulator of floral development decreased protein accumulation. It is suggested that these effects trigger a transformation of flowers into leafy structures.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (7 results)

All 2018 2017 2016 2015

All Journal Article (1 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (6 results) (of which Int'l Joint Research: 1 results)

  • [Journal Article] Genome analysis of the foxtail millet pathogen Sclerospora graminicola reveals the complex effector repertoire of graminicolous downy mildews2017

    • Author(s)
      Michie Kobayashi, Yukie Hiraka, Akira Abe, Hiroki Yaegashi, Satoshi Natsume, Hideko Kikuchi, Hiroki Takagi, Hiromasa Saitoh, Joe Win, Sophien Kamoun, Ryohei Terauchi
    • Journal Title

      BMC Genomics

      Volume: 18 Issue: 1

    • DOI

      10.1186/s12864-017-4296-z

    • NAID

      120006645322

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] アワしらが病菌新規エフェクター候補の解析2018

    • Author(s)
      小林光智衣・平賀幸江・阿部陽・八重樫弘樹・夏目俊・菊池秀子・寺内良平
    • Organizer
      第58回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] アワしらが病菌ではJacalin様レクチンが独自に進化している2017

    • Author(s)
      小林光智衣・平賀幸江・阿部陽・八重樫弘樹・夏目俊・菊池秀子・齋藤宏昌・寺内良平
    • Organizer
      第58回日本植物生理学会年会
    • Place of Presentation
      鹿児島大学 郡元キャンパス
    • Year and Date
      2017-03-16
    • Related Report
      2016 Research-status Report
  • [Presentation] アワしらが病菌の全ゲノムシーケンス解析2016

    • Author(s)
      小林光智衣
    • Organizer
      農学中手の会
    • Place of Presentation
      雄琴温泉 湯の宿 木もれび
    • Year and Date
      2016-11-10
    • Related Report
      2016 Research-status Report
  • [Presentation] Whole genome sequencing of the oomycete pathogen Sclerospora graminicola and prediction of effector candidates2016

    • Author(s)
      Michie Kobayashi, Yukie Hiraka, Akira Abe, Hiroki Yaegashi, Satoshi Natsume, Hideko Kikuchi, Hiroki Takagi, Hiromasa Saitoh, Joe Win, Sophien Kamoun, Ryohei Terauchi
    • Organizer
      2016 IS-MPMI XVII Congress
    • Place of Presentation
      the Oregon Convention Center
    • Year and Date
      2016-07-17
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] アワしらが病菌の全ゲノムシーケンス解析によるエフェクター候補遺伝子の探索2016

    • Author(s)
      小林光智衣・平賀幸江・植村亜衣子・阿部陽・高木宏樹・齋藤宏昌・寺内良平
    • Organizer
      平成28年度日本植物病理学会大会
    • Place of Presentation
      岡山コンベンションセンター
    • Year and Date
      2016-03-21
    • Related Report
      2015 Research-status Report
  • [Presentation] アワしらが病ゲノムの解析2015

    • Author(s)
      小林光智衣・平賀幸江・八重樫弘樹・夏目俊・阿部陽・高木宏樹・齋藤宏昌・寺内良平
    • Organizer
      平成27年度植物感染生理談話会
    • Place of Presentation
      メルパルク松山
    • Year and Date
      2015-08-24
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-03-29  

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