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Elucidation of molecular mechanisms involved in bacterial biofilm inhibition

Research Project

Project/Area Number 15K18670
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Applied microbiology
Research InstitutionShinshu University

Principal Investigator

OGASAWARA Hiroshi  信州大学, 学術研究院総合人間科学系, 助教 (30535232)

Research Collaborator ISHIHAMA Akira  法政大学, マイクロナノテクノロジー研究センター, 客員教授 (80019869)
KATO Yuki  信州大学, 大学院・応用生物科学科, 大学院生
ISHIZUKA Toshiyuki  信州大学, 大学院・応用生物科学科, 大学院生
SANO Kotaro  信州大学, 大学院・応用生物科学科, 大学院生
MASHUI Shohei  信州大学, 大学院・応用生物科学科, 大学院生
HOTTA Shuhei  信州大学, 繊維学部, 大学生
KOBAYASHI Hiroaki  信州大学, 繊維学部, 大学生
AOKI Michiko  信州大学, 繊維学部, 大学生
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2017: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
KeywordsBiofilm formation / CsgA / CsgD / Escherichia coli / Amyloid fimbriae / Biofilm inhibition / Transcription factor / Periplasm / バイオフィルム / Curli線毛 / 大腸菌 / アミロイド線維 / 転写因子
Outline of Final Research Achievements

In biofilm formation of Escherichia coli, amyloid fimbriae and cellulose are the major component involved in cell assembly and surface attachment. In this study, we clarified that the expression of E. coli biofilm master regulator CsgD, and the amyloid fimbriae subunits CsgA are negatively regulated by YehT/YehU two component regulatory system. In addition, comprehensive analysis using the collection of the purified transcription factors (TFs) and a set of plasmid collection for overproduction of TFs, we identified some species of TFs that specifically bind to the csgBA promoter and regulates its expression. We also found the novel periplasmic protein YccT which regulated by CsgD involved in the inhibition of amyloid fiber composed of CsgA, and we also clarified the roles involved in the inhibition of csgBA expression. Based on the results of this research, we aim to elucidate the molecular mechanism of inhibition of bacterial biofilm formation.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (10 results)

All 2018 2017 2016 2015

All Journal Article (2 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 2 results,  Open Access: 1 results) Presentation (8 results)

  • [Journal Article] Single-target regulators form a minor group of transcription factors in Escherichia coli K-122018

    • Author(s)
      Shimada Tomohiro、Ogasawara Hiroshi、Ishihama Akira
    • Journal Title

      Nucleic Acids Research

      Volume: 46 Issue: 8 Pages: 3921-3936

    • DOI

      10.1093/nar/gky138

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A structural sketch of RcdA, a transcription factor controlling the master regulator of biofilm formation2017

    • Author(s)
      Sugino Hirotaka、Usui Takanori、Shimada Tomohiro、Nakano Masahiro、Ogasawara Hiroshi、Ishihama Akira、Hirata Akira
    • Journal Title

      FEBS Lett.

      Volume: 591 Issue: 13 Pages: 2019-2031

    • DOI

      10.1002/1873-3468.12713

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] 大腸菌ペリプラズムタンパク質YccTによるアミロイド線維形成抑制機構の解明2017

    • Author(s)
      佐野晃太郎、加藤佑輝、小笠原寛
    • Organizer
      日本農芸化学会2017年度大会
    • Place of Presentation
      京都女子大学(京都市)
    • Year and Date
      2017-03-18
    • Related Report
      2016 Research-status Report
  • [Presentation] 大腸菌アミロイド線維形成に関与する新規遺伝子群の同定と機能解明2017

    • Author(s)
      井出 有佳里、加藤 佑輝、杉本 真也、小笠原 寛
    • Organizer
      2017年度生命科学系学会合同年次大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 大腸菌新規アミロイド線維形成抑制因子YccTの機能解明2016

    • Author(s)
      佐野晃太郎、小笠原寛
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report
  • [Presentation] 大腸菌の遊走性とバイオフィルム形成を制御する新規転写因子の同定と機能解明2016

    • Author(s)
      増井祥平、石塚俊行、石浜明、小笠原寛
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report
  • [Presentation] バイオフィルム統括制御因子CsgDによって制御される新規アミロイド線維形成抑制因子YccTの機能解明2016

    • Author(s)
      佐野晃太郎、加藤佑輝、小笠原寛
    • Organizer
      第10回日本ゲノム微生物学会年会
    • Place of Presentation
      東京工業大学 (東京都目黒区)
    • Year and Date
      2016-03-04
    • Related Report
      2015 Research-status Report
  • [Presentation] 大腸菌バイオフィルム形成統括因子CsgDの新規発現抑制機構の解明2016

    • Author(s)
      石塚俊行、太田あず佐、石浜明、小笠原寛
    • Organizer
      第10回日本ゲノム微生物学会年会
    • Place of Presentation
      東京工業大学 (東京都目黒区)
    • Year and Date
      2016-03-04
    • Related Report
      2015 Research-status Report
  • [Presentation] 大腸菌バイオフィルム形成統括因子CsgDの新規転写制御因子の同定と機能解明2015

    • Author(s)
      石塚俊行、石浜明、小笠原寛
    • Organizer
      第38回日本分子生物学会年会
    • Place of Presentation
      神戸国際展示場 (兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report
  • [Presentation] バイオフィルム統括制御因子CsgDによって制御される新規Curli線毛抑制機構の解明2015

    • Author(s)
      佐野晃太郎、小笠原寛
    • Organizer
      第38回日本分子生物学会年会
    • Place of Presentation
      神戸国際展示場 (兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2021-01-27  

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