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Development of novel genome engineering technology for inter-chromosomal manipulation in the budding yeast

Research Project

Project/Area Number 15K18672
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Applied microbiology
Research InstitutionOsaka University

Principal Investigator

Sasano Yu  大阪大学, 工学研究科, 助教 (90640194)

Co-Investigator(Renkei-kenkyūsha) HARASHIMA Satoshi  崇城大学, 生物生命学部, 教授 (70116086)
SUGIYAMA Minetaka  大阪大学, 大学院工学研究科, 准教授 (80379130)
Project Period (FY) 2015-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2015: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
KeywordsCRISPR-PCS / 出芽酵母 / ゲノム工学 / 染色体工学 / CRISPR/Cas9 / 菌株育種 / CRISPR-Cas / Chromosome engineering / Yeast
Outline of Final Research Achievements

Most useful traits required for industrial yeast strains are regulated by many genes. Thus, development of genome engineering technology for large scale genome manipulation in yeast is desired. In this study, a novel chromosome engineering technology called CRISPR-PCS that enables simultaneous splitting of yeast chromosomes at the targeted sites at a time was developed. With this technology, highly efficient chromosome splitting became possible and we succeeded in quadruple chromosome splitting. In addition, other chromosomal manipulation such as deletion, duplication, replacement, translocation, fusion, and circularization also became possible by applying CRISPR-PCS. It is expected that CRISPR-PCS technology can be applied to innovative microbial breeding.

Report

(3 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • Research Products

    (11 results)

All 2017 2016 2015

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 2 results) Presentation (7 results) (of which Int'l Joint Research: 4 results,  Invited: 2 results) Funded Workshop (1 results)

  • [Journal Article] CRISPR-PCS: a powerful new approach to inducing multiple chromosome splitting in Saccharomyces cerevisiae2016

    • Author(s)
      Yu Sasano, Koki Nagasawa, Saeed Kaboli, Minetaka Sugiyama, Satoshi Harashima
    • Journal Title

      Scientific Reports.

      Volume: 6 Issue: 1 Pages: 1-11

    • DOI

      10.1038/srep30278

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Improved stress resistance and ethanol production by segmental haploidization of the diploid genome in Saccharomyces cerevisiae2016

    • Author(s)
      Kaboli S, Miyamoto T, Sunada K, Sasano Y, Sugiyama M, Harashima S
    • Journal Title

      Journal of Bioscience and Bioengineering

      Volume: 未定 Issue: 6 Pages: 638-644

    • DOI

      10.1016/j.jbiosc.2015.10.012

    • NAID

      40020873418

    • Related Report
      2016 Annual Research Report 2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Genome-wide construction of a series of designed segmental aneuploids in Saccharomyces cerevisiae2015

    • Author(s)
      Natesuntorn W, Iwami K, Matsubara Y, Sasano Y, Sugiyama M, Kaneko Y, Harashima S
    • Journal Title

      Scientific Reports

      Volume: 5 Issue: 1 Pages: 12510-12526

    • DOI

      10.1038/srep12510

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] 多様な染色体操作を可能にするCRISPR-PCS法の開発と応用展開2017

    • Author(s)
      笹野佑
    • Organizer
      第82回酵母研究会
    • Place of Presentation
      北野工房のまち(兵庫県神戸市)
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] CRISPR-PCS法を基盤とした酵母染色体の多様な操作技術の開発2016

    • Author(s)
      笹野佑、長澤宏器、木村駿太、Kaboli Saeed、中井大志、村山亮太、杉山峰崇、原島俊
    • Organizer
      日本生物工学会2016年度大会
    • Place of Presentation
      富山国際会議場(富山県富山市)
    • Year and Date
      2016-09-28
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Yeast genome engineering -A new challenge to deciphering genome function and breeding-2016

    • Author(s)
      Satoshi Harashima, Minetaka Sugiyama, Yu Sasano
    • Organizer
      14th International Congress on Yeast
    • Place of Presentation
      淡路夢舞台国際会議場(兵庫県淡路市)
    • Year and Date
      2016-09-11
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] CRISPR-PCS: a versatile chromosome manipulation technology in Saccharomyces cerevisiae2016

    • Author(s)
      Yu Sasano, Koki Nagasawa, Shunta Kimura, Saeed Kaboli, Taishi Nakai, Ryota Murayama, Minetaka Sugiyama, Satoshi Harashima
    • Organizer
      14th International Congress on Yeast
    • Place of Presentation
      淡路夢舞台国際会議場(兵庫県淡路市)
    • Year and Date
      2016-09-11
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 出芽酵母において多様な染色体操作を可能にするCRISPR-PCS法の開発2016

    • Author(s)
      笹野佑、長澤宏器、木村駿太、Kaboli Saeed、中井大志、村山亮太、杉山峰崇、原島俊
    • Organizer
      第49回酵母遺伝学フォーラム
    • Place of Presentation
      シーサイドホテル舞子ビラ(兵庫県神戸市)
    • Year and Date
      2016-09-09
    • Related Report
      2016 Annual Research Report
  • [Presentation] CRISPR-PCS: An efficient and versatile chromosome splitting technology in yeast2015

    • Author(s)
      Yu Sasano
    • Organizer
      27th International Conference on Yeast Genetics and Molecular Biology
    • Place of Presentation
      Levico Terme (Italy)
    • Year and Date
      2015-09-06
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] CRISPR-PCS:多様な染色体操作が可能な染色体工学技術2015

    • Author(s)
      笹野 佑
    • Organizer
      第48回酵母遺伝学フォーラム
    • Place of Presentation
      広島
    • Year and Date
      2015-09-01
    • Related Report
      2015 Research-status Report
  • [Funded Workshop] 27th International Conference on Yeast Genetics and Molecular Biology2015

    • Place of Presentation
      Levico Terme (Trento), Italy
    • Year and Date
      2015-09-06
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2018-03-22  

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