• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Multi-level understanding of innate vocalization

Research Project

Project/Area Number 15K18802
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Integrative animal science
Research InstitutionTokyo University of Agriculture and Technology (2016-2017)
National Institute for Basic Biology (2015)

Principal Investigator

Shimmura Tsuyoshi  東京農工大学, (連合)農学研究科(研究院), 准教授 (50707023)

Research Collaborator YOSHIMURA takashi  名古屋大学, ITbM研究所, 教授 (40291413)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2017: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords行動 / 発声 / 社会 / 順位 / RNA-seq / GWAS / 鶏 / リズム
Outline of Final Research Achievements

The aim of this research project is to understand the control mechanism of innate vocalization at multi-level by using rooster crowing "Cock-a-doodle-doo" as a model. At group level, we revealed that crowing is controlled by the circadian clock and social rank in the Red jungle fowls, ancestral species of chicken. At gene expression level, we performed RNA-seq was using the intracerebral centers of individual showing and not showing crowing, and analyzed it using informatics to extract candidate genes that control motivation of vocalization. At genome level, in order to clarify the molecular basis that regulates the pattern of vocalization, we recorded crowing from various chickens showing normal or unique vocalization and also collected blood for extracting DNA.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (25 results)

All 2018 2017 2016 2015 2014 Other

All Int'l Joint Research (3 results) Journal Article (5 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 5 results,  Open Access: 2 results,  Acknowledgement Compliant: 1 results) Presentation (14 results) (of which Int'l Joint Research: 5 results,  Invited: 8 results) Book (2 results) Remarks (1 results)

  • [Int'l Joint Research] Uppsala University(Sweden)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] Hasanuddin University(Indonesia)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] シンガポール国立大学(シンガポール)

    • Related Report
      2016 Research-status Report
  • [Journal Article] Development of furnished cages re-using conventional cages for laying hens: behaviour, physical condition and productivity2018

    • Author(s)
      Shimmura T, Maekawa N, Hirahara S, Tanaka T, Appleby MC
    • Journal Title

      Animal Science journal

      Volume: 89 Issue: 2 Pages: 498-504

    • DOI

      10.1111/asj.12955

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Involvement of circadian clock in crowing of red jungle fowls (Gallus gallus).2017

    • Author(s)
      Shuichi ITO, Shuho HORI, Makiko HIROSE, Mari IWAHARA, Azusa YATSUSHIRO, Atsushi MATSUMOTO, Masayuki TANAKA, Chinobu OKAMOTO, Ken-ichi YAYOU, Tsuyoshi SHIMMUR.
    • Journal Title

      Animal Science Journal

      Volume: 88 Issue: 4 Pages: 691-695

    • DOI

      10.1111/asj.12677

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Dynamic plasticity in the phototransduction pathway regulates seasonal changes in color perception2017

    • Author(s)
      Shimmura T, Nakayama T, Shinomiya A, Fukamachi S, Yasugi M, Watanabe E, Shimo T, Senga T, Nishimura T, Tanaka M, Kamei Y, Naruse K, Yoshimura T
    • Journal Title

      Nature Communications

      Volume: 8 Pages: 1-7

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The highest-ranking rooster has priority to announce the break of dawn2015

    • Author(s)
      Shimmura T, Ohashi S, Yoshimura T
    • Journal Title

      Scientific Reports

      Volume: 5 Issue: 1 Pages: 1-9

    • DOI

      10.1038/srep11683

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Intrinsic photosensitivity of a deep brain photoreceptor2014

    • Author(s)
      Nakane Y, Shimmura T, Abe H, Yoshimura T
    • Journal Title

      Current Biology

      Volume: 24 Issue: 2 Pages: 214-220

    • DOI

      10.1111/asj.12253

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Presentation] Toward multi-level understanding of animal behaviour2017

    • Author(s)
      Shimmura T
    • Organizer
      IMBIM-IGP Genomics Seminor. Uppsala University.
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] メダカの体色と色覚の季節適応2017

    • Author(s)
      新村毅、中山友哉、四宮愛、深町昌司、八杉公基、渡辺英治、下貴行、千賀琢未、西村俊哉、田中実、亀井保博、成瀬清、吉村崇
    • Organizer
      日本動物学会第88回大会シンポジウム「動物の体色と環境適応」
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 共喰いの分子基盤の解明に向けて2017

    • Author(s)
      新村毅
    • Organizer
      第3回ユニークな少数派実験動物を扱う若手が最先端アプローチを勉強する会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 集団遺伝学を用いた行動の分子基盤の解明の試み:攻撃行動と先天的発声を例に2017

    • Author(s)
      新村毅
    • Organizer
      広島大学日本鶏資源開発プロジェクト研究センター 第20回JAB特別セミナー
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 鳥類の発声の分子制御機構の解明に向けて2017

    • Author(s)
      新村毅
    • Organizer
      第41回鳥類内分泌研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] メダカにおける季節変化への適応機構2016

    • Author(s)
      新村毅, 吉村崇
    • Organizer
      第23回日本時間生物学会学術大会シンポジウム「動物の多様なリズムとその応用」
    • Place of Presentation
      名古屋大学(愛知県名古屋市)
    • Year and Date
      2016-11-12
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] Timing of rooster crowing is under the control of circadian clock and social rank2016

    • Author(s)
      Shimmura T, Yoshimura T
    • Organizer
      ISAE2016
    • Place of Presentation
      White Oaks Conference Resort (Niagara, Canada)
    • Year and Date
      2016-10-11
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 動物の行動の多階層的理解 ‐ニワトリの発声をモデルとして‐2016

    • Author(s)
      新村毅
    • Organizer
      畜産学会若手企画サマーキャンプ「アニマルサイエンス若手研究者の胎動」
    • Place of Presentation
      基礎生物学研究所(愛知県岡崎市)
    • Year and Date
      2016-09-22
    • Related Report
      2016 Research-status Report
    • Invited
  • [Presentation] Development of enriched housing systems for farm animals: Welfare and productivity2016

    • Author(s)
      Shimmura T
    • Organizer
      ICP2016
    • Place of Presentation
      Pacifico Yokohama(神奈川県横浜市)
    • Year and Date
      2016-08-24
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 最上位個体の雄鶏は朝を知らせる優先権を有する2015

    • Author(s)
      新村毅・大橋将星・吉村崇
    • Organizer
      日本動物行動学会第34回大会
    • Place of Presentation
      東京海洋大学(東京都港区)
    • Year and Date
      2015-11-20
    • Related Report
      2015 Research-status Report
  • [Presentation] セキショクヤケイにおけるCrowingの周期性および新規個体導入による影響2015

    • Author(s)
      堀秀帆・廣瀬真紀子・新村毅・岡本智伸・伊藤秀一
    • Organizer
      暖地畜産学会熊本大会
    • Place of Presentation
      東海大学熊本キャンパス(熊本県熊本市)
    • Year and Date
      2015-10-14
    • Related Report
      2015 Research-status Report
  • [Presentation] メダカの季節繁殖における日長応答の地理的変異2015

    • Author(s)
      四宮愛・足立大輔・中務真愛・新村毅・下貴行・成瀬清・亀井保博・吉村崇
    • Organizer
      日本動物学会第86回新潟大会
    • Place of Presentation
      新潟コンベンションセンター朱鷺メッセ(新潟県新潟市)
    • Year and Date
      2015-09-17
    • Related Report
      2015 Research-status Report
  • [Presentation] Effect of the season and the existence of the female gives the expression of the crowing in the Red jungle fowl2015

    • Author(s)
      Hori S, Iwahara M, Hirose M, Matsumoto A, Tanaka M, Shimmura T, Ito S
    • Organizer
      The 48th International Congress of the International Society for Applied Ethology
    • Place of Presentation
      Hokkaido University, Sapporo, Hokkaido, Japan
    • Year and Date
      2015-09-14
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Circadian clock and social rank determine the timing of rooster crowing2015

    • Author(s)
      Shimmura T, Ohashi S, Yoshimura T
    • Organizer
      Chronobiology Gordon Research Conference
    • Place of Presentation
      Melia Golf Vichy Catalan Business and Convention Center, Girona, Spain
    • Year and Date
      2015-06-28
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Book] Regulation of seasonal reproduction by hypothalamic activation of thyroid hormone. Thyroid Hormone in Brain and Brain Cells (Flamant F, Bernal J, Koibuchi N eds.)2018

    • Author(s)
      Shinomiya A, Shimmura T, Nishiwaki-Ohkawa T, Yoshimura T
    • Total Pages
      99
    • Publisher
      Frontiers Media SA
    • ISBN
      9782889197026
    • Related Report
      2017 Annual Research Report
  • [Book] ホルモンから見た生命現象と進化シリーズII 「発生・変態・リズム-時-」2016

    • Author(s)
      新村毅, 吉村崇
    • Total Pages
      211
    • Publisher
      裳華房
    • Related Report
      2016 Research-status Report
  • [Remarks] research map

    • URL

      http://researchmap.jp/shimmura/

    • Related Report
      2015 Research-status Report

URL: 

Published: 2015-04-16   Modified: 2019-03-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi