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Evaluation of iPS cells using chromosome comformation capture analysis

Research Project

Project/Area Number 15K21630
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Applied molecular and cellular biology
General medical chemistry
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

Yamada Daisuke  国立研究開発法人理化学研究所, 統合生命医科学研究センター, 研究員 (50525897)

Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
KeywordsiPS細胞 / ポリコーム / 染色体高次構造 / Ring1B / enhanced 4C / Ink4a/Arf / 初期化 / B-iPS
Outline of Final Research Achievements

In this study, we reveal that polycomb protein Ring1b showed bi-functional role in somatic cell reprogramming to pluripotency. Indeed, we performed iPS induction assay using Ring1B KO B cell. We observed that Ring1B KO acceralates iPS induction in early phase, while inhibits in late phase. Furthermore, Ring1B deletion after iPS generation showed increasing of differentiated cells and decleationg of cell growth. Finally, enhaced 4C Circular chromosome conformation capture) -seq targeted in polycomb target gene, Ink4a/Arf (Cdkn2a), indicated that insufficient reprogramming were exist in iPS cells. These results suggested that polycomb can be used as a marker for iPS evaluation.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-03-29  

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