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Structure-based drug designs for the treatment of prion disease

Research Project

Project/Area Number 16209017
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Virology
Research InstitutionNagasaki University

Principal Investigator

KATAMINE Shigeru  Nagasaki University, Graduate School of Biomedical Sciences, Department of Microbiology and Immunology, Professor, 大学院医歯薬学総合研究科, 教授 (40161062)

Co-Investigator(Kenkyū-buntansha) ITO Takasi  Nagasaki University, Department of Microbiology and Immunology, Professor, 大学院医歯薬学総合研究科, 教授 (90306275)
NISHIDA Noriyuki  Nagasaki University, Graduate School of Biomedical Sciences, Department of Microbiology and Immunology, Assistant Professor, 大学院医歯薬学総合研究科, 助教授 (40333520)
KUWATA Kazuo  Gifu University, Center for Emerging Infectious Diseases, 人獣感染防御研究センター, 教授 (00170142)
Project Period (FY) 2004 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥50,700,000 (Direct Cost: ¥39,000,000、Indirect Cost: ¥11,700,000)
Fiscal Year 2006: ¥9,750,000 (Direct Cost: ¥7,500,000、Indirect Cost: ¥2,250,000)
Fiscal Year 2005: ¥9,750,000 (Direct Cost: ¥7,500,000、Indirect Cost: ¥2,250,000)
Fiscal Year 2004: ¥31,200,000 (Direct Cost: ¥24,000,000、Indirect Cost: ¥7,200,000)
Keywordsprion diseases / prion strain / conformation / NMR / drug discovery / プリオン類似蛋白 / 遺伝子改変マウス / 海綿状変性
Research Abstract

The conversion of the normal form of prion protein (PrP^c) to a disease-associated form (PrP^<Sc>) is a key molecular event in the pathogenesis of Transmissible Spongiform Encephalopathies (TSEs). We conducted a computed screening of ligands which can bind to mouse prion, particularly to the fourteen amino acids surrounding a pocket located in the helix A-S2 loop and the C-terminal half of helix B, which are structurally less stable shown by the CPMG dispersion relaxation measurement and high-pressure NMR. From over 320,000 substances, 59 candidates were selected and subjected to ex vivo tests. Among the 14 commercially-available compounds tested, of which one efficiently reduced PrP^<Sc> production in human TSE-infected cell culture (1.3 μM IC_<50>). Thermal unfolding experiments showed that the ellipticity of recombinant mouse PrP^c remains unchanged at around 40℃ in the presence of the compound, suggesting that the PrP^c conformation was significantly stabilized. Application of this new strategy, which we have designated 'Dynamics-Based Drug-Design', not only provides new insight in the molecular mechanism of PrP^<Sc> production, but may also lead the way to the development of drugs for TSEs.

Report

(4 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (30 results)

All 2007 2006 2005 2004 Other

All Journal Article (28 results) Book (2 results)

  • [Journal Article] Newly established in vitro system with fluorescent proteins shows that abnormal expression of downstream prion protein-like protein in mice is probably due to functional disconnection between splicing and 3' formation of prion protein pre-mRNA.2007

    • Author(s)
      Yoshikawa D et al.
    • Journal Title

      Gene 386 (1-2)

      Pages: 139-146

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Immunization with recombinant bovine but not mouse prion protein delays the onset of disease in mice inoculated with a mouse-adapted prion.2007

    • Author(s)
      Ishibashi D etal
    • Journal Title

      Vaccine 25(6)

      Pages: 985-992

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Immunohistochemical characterization of cell types expressing the cellular prion protein in the small intestine of cattle and mice.2007

    • Author(s)
      Miyazawa K et al.
    • Journal Title

      Histochem Cell Biol 127(3)

      Pages: 291-301

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Newly established in vitro system with fluorescent proteins shows that 3 abnormal expression of downstream prion protein -like protein in mice is probably due to functional disconnection between splicing and 3' formation of prion protein pre-mRNA2007

    • Author(s)
      Yoshikawa D, Kopacek J, Yamaguchi N, Ishibashi D, Yamanaka H, Yamaguchi Y, Katamine S, Sakaguchi S
    • Journal Title

      Gene 386

      Pages: 139-146

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Immunization with recombinant bovine but not mouse prion protein delays the onset of disease in mice inoculated with a mouse-adapted prion.2007

    • Author(s)
      Ishibashi D, Yamanaka H, Yamaguchi N, Yoshikawa D, Nakamura R, Okimura N, Yamaguchi Y, Shigematsu K, Katamine S, Sakaguchi S
    • Journal Title

      Vaccine 25 (6)

      Pages: 985-992

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Immunohistochemical characterization of cell types expressing the cellular prion protein in the small intestine of cattle and mice.2007

    • Author(s)
      Miyazawa K, Kanaya T, Tanaka S, Takakura I, Watanabe K, Ohwada S, Kitazawa H, Rose MT, Sakaguchi S, K, Ohwada S, Kitazawa H, Rose MT, Sakaguchi S, Katamine S, Yamaguchi T, Aso H:
    • Journal Title

      Histochem Cell Biol. 127 (3)

      Pages: 291-301

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Newly established in vitro system with fluorescent proteins shows that abnormal expression of downstream prion protein-like protein in mice is probably due to functional disconnection between splicing and 3' formation of prion protein pre-mRNA.2007

    • Author(s)
      Yoshikawa D et al.
    • Journal Title

      Gene 386(1-2)

      Pages: 139-146

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Immunization with recombinant bovine but not mouse prion protein delays the onset of disease in mice inoculated with a mouse-adapted prion.2007

    • Author(s)
      Ishibashi D et al.
    • Journal Title

      Vaccine 25(6)

      Pages: 985-992

    • Related Report
      2006 Annual Research Report
  • [Journal Article] immunohistochemical characterization of cell types expressing the cellular prion protein in the small intestine of cattle and mice.2007

    • Author(s)
      Miyazawa K et al.
    • Journal Title

      Histochem Cell Biol 127(3)

      Pages: 291-301

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Prion strain-dependent differences in conversion of mutant prion proteins in cell culture.2006

    • Author(s)
      Atarashi R et al.
    • Journal Title

      J Virol 80 (16)

      Pages: 7854-7862

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Styrylbenzoazole derivatives for imaging of prion plaques and treatment of transmissible spongiform encephalopathies.2006

    • Author(s)
      Ishikawa K etal
    • Journal Title

      J Neurochem 99(1)

      Pages: 198-205

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] プリオン仮説(タンパク質単独犯説)は本当か。2006

    • Author(s)
      片峰 茂
    • Journal Title

      科学(岩波書店) 11月号

      Pages: 1122-1126

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Prion strain-dependent differences in conversion of mutant prion proteins in cell culture.2006

    • Author(s)
      Atarashi R, Sim VL, Nishida N, Caughey B, Katamine S
    • Journal Title

      J Virol 80 (16)

      Pages: 7854-7862

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Styrylbenzoazole derivatives for imaging of prion plaques and treatment of transmissible spongiform encephalopathies.2006

    • Author(s)
      Ishikawa K et al.
    • Journal Title

      J Neurochem 99(1)

      Pages: 198-205

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Prion strain-dependent differences in conversion of mutant prion proteins in cell culture.2006

    • Author(s)
      Atarashi R et al.
    • Journal Title

      J Virol 80(16)

      Pages: 7854-7862

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Enhanced mucosal immunogenicity of prion protein following fusion with B subunit of Escherichia coli heat-labile enterotoxin.2006

    • Author(s)
      Yamanaka H et al.
    • Journal Title

      Vaccine (Epub ahead of print)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] プリオンの今日的概念「特集・プリオン病とBSE」2006

    • Author(s)
      片峰 茂
    • Journal Title

      化学療法の領域 22巻1号

      Pages: 23-28

    • Related Report
      2005 Annual Research Report
  • [Journal Article] プリオン株をめぐる謎「特集・プリオン病とBSE」2006

    • Author(s)
      西田 教行
    • Journal Title

      化学療法の領域 22巻1号

      Pages: 71-80

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Biological and biochemical characteristics of prion strains conserved in persistently infected cell cultures.2005

    • Author(s)
      Arima K et al.
    • Journal Title

      J. Virol 79(11)

      Pages: 7104-7112

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Reciprocal interference between specific CJD and scrapie agents in neural cell cultures.2005

    • Author(s)
      Nishida N et al.
    • Journal Title

      Science 21(5747)

      Pages: 493-496

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Female-specific neuroprotection against transient brain ischemia observed in mice devoid of prion protein is abolished by ectopic expression of prion protein-like protein.2005

    • Author(s)
      Sakurai-Yamashita Y et al.
    • Journal Title

      Neuroscience 136(1)

      Pages: 281-287

    • Related Report
      2005 Annual Research Report
  • [Journal Article] A pitfall in diagnosis of human prion diseases using detection of protease-resistant prion protein in urine : Contamination with bacterial outer membra proteins.2004

    • Author(s)
      Furukawa H et al.
    • Journal Title

      J Biol Chem 279(22)

      Pages: 23661-23667

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Doppel-induced Purkinje cell death is stoichiometrically abrogated by prion protein.2004

    • Author(s)
      Yamaguchi N et al.
    • Journal Title

      Biochem Biophys Res Common 319(4)

      Pages: 1247-1252

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Uptake and efflux of quinacrine, a candidate for the treatment of prion diseases, at the blood-brain barrer.2004

    • Author(s)
      Dohgu S et al.
    • Journal Title

      Cell Mol Neurobiol 24(2)

      Pages: 205-217

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Toxicity of quinacrine can be reduced by co-administration of p-glycoprotein inhibitor in sporadic Creutzfeldt-Jakob desease2004

    • Author(s)
      Satoh K et al.
    • Journal Title

      Cell Mol Meurobiol 4(6)

      Pages: 873-875

    • Related Report
      2004 Annual Research Report
  • [Journal Article] The absence of prion-like infectivity in mice expressing prion-like protein.2004

    • Author(s)
      Atarashi R et al.
    • Journal Title

      EXCLI J. 3

      Pages: 82-90

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Slow conformational dynamics in the hanster prion protein.2004

    • Author(s)
      Kuwata K et al.
    • Journal Title

      Biochemistry 43

      Pages: 4439-4446

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Biological and biochemical characteristics of prion strains conserved in persistently infected cell cultures

    • Author(s)
      Arima K et al.
    • Journal Title

      J.Virol (in press)

    • Related Report
      2004 Annual Research Report
  • [Book] 論理的創薬入門-構造生物学に基づくアプローチ2006

    • Author(s)
      桑田 一夫
    • Total Pages
      276
    • Publisher
      共立出版
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Book] Splinger-Verlag Tokyo, PRIONS ; Food and Drug Safety (Ed: T Kitamoto)2005

    • Author(s)
      Kuwata K et al.
    • Publisher
      Semi-classical quantization of protein dynamics : novel NMR relaxation formalism and its application to prion.
    • Related Report
      2005 Annual Research Report

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Published: 2004-04-01   Modified: 2016-04-21  

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