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Microscale structures of phytoplankton and turbulence

Research Project

Project/Area Number 16310005
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Environmental dynamic analysis
Research InstitutionTokyo University of Marine Science and Technology

Principal Investigator

YAMAZAKI Hidekatsu  Tokyo University of Marine Science and Technology, Faculty of Marine Science, Professor, 海洋科学部, 教授 (80260537)

Co-Investigator(Kenkyū-buntansha) TANAKA Yuji  Tokyo University of Marine Science and Technology, Faculty of Marine Science, Associate Professor, 海洋科学部, 助教授 (90207150)
Project Period (FY) 2004 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥13,500,000 (Direct Cost: ¥13,500,000)
Fiscal Year 2006: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 2005: ¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 2004: ¥9,200,000 (Direct Cost: ¥9,200,000)
Keywordsturbulence / microstructure / mixing / phytoplankton / fluorescence / 蛍光光度計
Research Abstract

Turbulence plays a major role in small scale distribution of phytoplankton, but no quantification has been established. In order to investigate this issue we have developed two different magnifications of fluorescent probes. One is based on LED technology and the other one makes use of laser technology. A new experimental calibration method is developed to estimate the resolution of each probe. This method compares the spatial response of fast temperature probe (FP07) and derives an appropriate wavenumber response function. So the signals from the probe can be corrected in wavenumber space. The LED probe resolves at least 2 cm, and the laser resolves at least 2 mm. We have successfully demonstrated fluorescence data exhibit near inertial subrange slope, -5/3, when velocity spectrum also show the -5/3 slope in the same wavenumber range. We have also demonstrated both probes are consistent when the signals are averaged larger than 50 cm spatial scale. We are now confident that phytoplankton changes the distribution as small as a few millimeters.

Report

(4 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (45 results)

All 2006 2005 2004

All Journal Article (44 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Phytoplankton microstructure in fully developed oceanic turbulence2006

    • Author(s)
      Yamazaki, H., J.G.Mitchell, L.Seuront, F.Wolk, H.Li
    • Journal Title

      Geophysical Res. Lett. 33

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Buoyancy generated turbulence in stably stratified flow with shear2006

    • Author(s)
      Hwang, J.H., H.Yamazaki, C.R.Rehmann
    • Journal Title

      Phys. Fluids 18

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] An estimation of buoyancy-flux for a mixture of turbulence and double diffusion2006

    • Author(s)
      Inoue, R., H.Yamazaki, T.kono, F.Wolk, J.Yoshida
    • Journal Title

      J. Phys. Oceanogr. 37

      Pages: 611-624

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Phytoplankton microstructure in fully developed oceanic turbulence2006

    • Author(s)
      Yamazaki, H.J.G.Mitchell, L.Seuront, F.Wolk, H.Li
    • Journal Title

      Geophysical Res.Lett. 33

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Buoyancy generated turbulence in stably stratified flow with shear.2006

    • Author(s)
      Hwang, J.H., H.Yamazaki, C.R.Rehmann
    • Journal Title

      Phys.Fluids 18

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] An estimation of buoyancy-flux for a mixture of turbulence and double diffusion.2006

    • Author(s)
      Inoue, R., H.Yamazaki, T.Kono, F.Wolk, J.Yoshida
    • Journal Title

      J.Phys Oceanogr 37

      Pages: 611-624

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Calibrating the spatial response of bio-optical sensors2006

    • Author(s)
      Wolk, F., H.Yamazaki, H.Li, R.G.Lueck
    • Journal Title

      J.Atmos.Oceanic Tech. 23, No.3

      Pages: 511-516

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Phytoplankton microstructure in fully developed oceanic turbulence2006

    • Author(s)
      Yamazaki, H., J.G.Mitchell, L.Seuront, F.Wolk, H.Li
    • Journal Title

      Geophysical Res.Lett 33

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Buoyancy generated turbulence in stably stratified flow with shear2006

    • Author(s)
      Hwang, J.H., H.Yamazaki, C.R.Rehmann
    • Journal Title

      Physics Fluid (In press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] An estimation of buoyancy-flux for a mixture of turbulence and double diffusion2006

    • Author(s)
      Inoue, R., H.Yamazaki, T.Kono, F.Wolk, J.Yoshida
    • Journal Title

      J.Phys Oceanogr (accepted)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Phytoplankton patch anatomy : seascape patterns in a turbulent ocean2006

    • Author(s)
      Mitchell, J.G., H.Yamazaki, L.Seuronta, F.Wolk, H.Li
    • Journal Title

      J.Mar.Sys (In press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Optical sensors2005

    • Author(s)
      Wolk, F., H.Yamazaki, L.Seuront
    • Journal Title

      In : Marine Turbulence - Theories, Observations and Models

      Pages: 110-114

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] How to do random walk right in eddy-viscosity models2005

    • Author(s)
      Yamazaki, H., T. Nagai
    • Journal Title

      In : Marine Turbulence - Theories, Observations and Models

      Pages: 207-212

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Intermittency2005

    • Author(s)
      Seuront, L., H.Yamazaki, F.Schmitt
    • Journal Title

      In : Marine Turbulenco - Theoties, Observations and Models

      Pages: 66-78

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Field and numerical study of entrainment laws for surface mixed layer2005

    • Author(s)
      Nagai, T., Yamazaki, H., Nagashima, H., Kantha
    • Journal Title

      Deep Sea Res. II 52

      Pages: 1109-1132

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Harmful algal blooms in stratified environments2005

    • Author(s)
      Gentien, P., P.Donoghay, H.Yamazaki, R.Raine, B.Reguera, T.Osborn
    • Journal Title

      Oceanography 18

      Pages: 172-183

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Calibrating the spatial response of bio-optical sensors2005

    • Author(s)
      Wolk, F., H.Yamazaki, H.Li, R.G.Lueck
    • Journal Title

      J. Atmos. Oceanic Tech. 23, No. 3

      Pages: 511-516

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Optical sensors.2005

    • Author(s)
      Wolk, F., H.Yamazaki, L.Seuront
    • Journal Title

      Marine Turbulence-Theories, Observations and Models((eds) H. Baumert, J.Simpson and J.Sundermann)(Cambridge University Press)

      Pages: 110-114

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] How to do random walk right in eddy-viscosity models.2005

    • Author(s)
      Yamazaki, H., T.Nagai
    • Journal Title

      Marine Turbulence-Theories, Observations and Models((eds) H.Baumert, J.Simpson and J.Sundermann)(Cambridge University Press)

      Pages: 207-212

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Intermittency.2005

    • Author(s)
      Seuront, L., H.Yamazaki, F.Schmitt
    • Journal Title

      Marine Turbulenco-Theoties, Observations and Models((eds) H. Baumert, J.Simpson and J.Sundermann)(Cambridge University Press.)

      Pages: 66-78

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Field and numerical study of entrainment laws for surface mixed layer.2005

    • Author(s)
      Nagai, T., H.Yamazaki, H.Nagashima., L.H.Kantha
    • Journal Title

      Deep Sea Res. II 52

      Pages: 1109-1132

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Harmful algal blooms in stratified environments.2005

    • Author(s)
      Gentien, P., P.Donoghay, H.Yamazaki, R.Raine, B.Reguera, T.Osborn
    • Journal Title

      Oceanography 18

      Pages: 172-183

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Calibrating the spatial response of bio-optical sensors.2005

    • Author(s)
      Wolk, F., H.Yamazaki, H.Li, R.G.Lueck
    • Journal Title

      J.Atmos.Oceanic Tech. 23, No.3

      Pages: 511-516

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Intermittency2005

    • Author(s)
      Seuront, L., H.Yamazaki, F.Schmit
    • Journal Title

      Marine Turbulence - Theories, Observations and Models, ((eds) H.Baumert, J.Simpson, J.Sundermann) (Cambridge University Press)

      Pages: 66-78

    • Related Report
      2005 Annual Research Report
  • [Journal Article] How to do random walk right in eddy-viscosity models2005

    • Author(s)
      Yamazaki, H., T.Nagai
    • Journal Title

      Marine Turbulence - Theories, Observations and Models, ((eds) H.Baumert, J.Simpson, J.Sundermann), (Cambridge University Press)

      Pages: 207-212

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Optical sensors2005

    • Author(s)
      Wolk, F., H.Yamazaki, L.Seuront
    • Journal Title

      Marine Turbulence - Theories, Observations and Models, ((eds) H.Baumert, J.Simpson, J.Sundermann), (Cambridge University Press)

      Pages: 110-114

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Field and numerical study of entrainment laws for surface mixed layer2005

    • Author(s)
      Nagai, T., H.Yamazaki, H.Nagashima, L.H.Kantha
    • Journal Title

      Deep Sea Res.II 52

      Pages: 1109-1132

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Intermittency, In : Marine Turbulenco-Theoties, Observations and Models2005

    • Author(s)
      Seuront, L, H.Yamazaki, F.Schmitt
    • Journal Title

      Cambridge University Press

      Pages: 66-78

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Simultaneous observations of biological and physical microstructures in the ocean2005

    • Author(s)
      Wolk, F., H.Yamazaki., L.Seuront
    • Journal Title

      Marine Turbulence-Theories, Observations and Models

      Pages: 110-114

    • Related Report
      2004 Annual Research Report
  • [Journal Article] How to do random walk right with Mello-Yamada model2005

    • Author(s)
      Yamazaki, H., T.Nagai., H.Baumert, J.Simpson, J.Sundermann
    • Journal Title

      Marine Turbulence-Theories, Observations and Models

      Pages: 207-212

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Field and numerical study of entrainment laws for surface mixed layer2005

    • Author(s)
      Nagai, T., H.Yamazaki, H.Nagashima, L.Kantha
    • Journal Title

      Deep Sea Res.II (in press)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] How islands fertilize the upper ocean2004

    • Author(s)
      Hasegawa, D., H.Yamazaki, R.G.Lueck, L.Seuront
    • Journal Title

      Geophys.Res.Lett. 31

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] The contribution of fine scale structure and swimming behavior to the formation of plankton layer on Georges Bank2004

    • Author(s)
      Gallager, S.M., H.Yamazaki, C.S.Davis
    • Journal Title

      Mar. Ecol. Prog. Ser. 267

      Pages: 27-43

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Comparison of biological scale resolution from CTD and microstructure measurements2004

    • Author(s)
      Wolk, F., L.Seuront, H.Yamazaki, S.Leterme
    • Journal Title

      In : Handbook of scaling methods in aquatic ecology : Measurement, analysis and simulation.((Ed.) Laurent Seuront and Peter G. Strutton)

      Pages: 3-15

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] An application of the lognormal theory to moderate Reynolds number turbulent structures2004

    • Author(s)
      Yamazaki, H., K.D.Squires
    • Journal Title

      In : Handbook of scaling methods in aquatic ecology : Measurement, analysis and simulation

      Pages: 469-478

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Can turbulence reduce the energy costs of hovering for planktonic organisms?2004

    • Author(s)
      Yamazaki.H., K.D.Squires, J.R.Strickler
    • Journal Title

      In : Handbook of scaling methods in aquatic ecology : Measurement, analysis and simulation

      Pages: 493-506

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Hydrodynamic disturbance and zooplankton swimming behavior2004

    • Author(s)
      Seuront, L., H.Yamazaki, S.Soussi
    • Journal Title

      Zoological Studies 43

      Pages: 377-388

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] How islands fertilize the upper ocean,2004

    • Author(s)
      Hasegawa, D., H.Yamazaki, R.G.Lueck, L.Seuront
    • Journal Title

      Geophys.Res.Lett. 31

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] The contribution of fine scale structure and swimming behavior to the formation of plankton layer on Georges Bank.2004

    • Author(s)
      Gallager, S.M., H.Yamazaki, C.S.Davis
    • Journal Title

      Mar.Ecol.Prog.Ser. 267

      Pages: 27-43

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Comparison of biological scale resolution from CTD and microstructure measurements.2004

    • Author(s)
      Wolk, F., L.Seuront, H.Yamazaki, S.Leterme
    • Journal Title

      Handbook of scaling methods in aquatic ecology : Measurement, analysis and simulation.((Ed.)Laurent Seuront and Peter G.Strutton)(CRC press.)

      Pages: 3-15

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] An application of the lognormal theory to moderate Reynolds number turbulent structures.2004

    • Author(s)
      Yamazaki, H., K.D.Squires
    • Journal Title

      Handbook of scaling methods in aquatic ecology : Measurement, analysis and simulation.((Ed.) Laurent Seuront and Peter G.Strutton(CRC press.)

      Pages: 469-478

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Can turbulence reduce the energy costs of hovering for planktonic organisms?2004

    • Author(s)
      Yamazaki.H., K.D.Squires, J.R.Strickler
    • Journal Title

      Handbook of scaling methods in aquatic ecology : Measurement, analysis and simulation.((Ed.) Laurent Seuront and Peter G.Strutton)(CRC press)

      Pages: 493-506

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Hydrodynamic disturbance and zooplankton swimming behavior.2004

    • Author(s)
      Seuront, L., H.Yamazaki, S.Soussi
    • Journal Title

      Zoological Studies 43

      Pages: 377-388

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] How islands fertilize the upper ocean2004

    • Author(s)
      Hasegawa, D., H.Yamazaki, R G.Lueck, L.Seuront
    • Journal Title

      Geophys.Res Lett 31

    • Related Report
      2004 Annual Research Report
  • [Patent(Industrial Property Rights)] 植物プランクトンの分布計測方法およびその装置2005

    • Inventor(s)
      山崎 秀勝
    • Industrial Property Rights Holder
      東京海洋大学
    • Industrial Property Number
      2005-095726
    • Filing Date
      2005-03-29
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary

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Published: 2004-04-01   Modified: 2016-04-21  

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