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Mechanisms for all-inclusive controls of cell cycle progression, and IgM H and L-chain gene expressions by GCN5 and HDAC2

Research Project

Project/Area Number 16310134
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 基礎ゲノム科学
Research InstitutionUniversity of Miyazaki

Principal Investigator

NAKAYAMA Tatsuo  University of Miyazaki, Frontier Science Research Center, Professor, フロンティア科学実験総合センター, 教授 (60031712)

Co-Investigator(Kenkyū-buntansha) TAKAMI Yasunari  University of Miyazaki, Department of Medical Sciences, Associate Professor, 医学部, 助教授 (80236356)
KIKUCHI Hidehiko  University of Miyazaki, Frontier Science Research Center, Assistant Professor, フロンティア科学実験総合センター, 助手 (10301384)
Project Period (FY) 2004 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥15,700,000 (Direct Cost: ¥15,700,000)
Fiscal Year 2006: ¥4,600,000 (Direct Cost: ¥4,600,000)
Fiscal Year 2005: ¥4,600,000 (Direct Cost: ¥4,600,000)
Fiscal Year 2004: ¥6,500,000 (Direct Cost: ¥6,500,000)
KeywordsHistone modifying enzyme / Gene targeting / DT40 / Cell cycle / Immunoglobulin / Histone chaperone / Apoptosis / Gene expression
Research Abstract

1. WD dipeptide motifs and LXXLL motif of chicken HIRA are essential for interactions with CAF-1p48 subunit and HDAC2 i a vitro and in vivo.
2. GCN5 is a supervisor in all-inclusive control of vertebrate cell cycle progression via transcription regulation of various cell cycle-related genes.
3. N-terminal and C-terminal halves of HIRA exhibit different roles in transcription regulation of cell cycle-related genes that contribute to control of vertebrate cell growth.
4. HAT1 is dispensable for replication-coupled chromatin assembly but contributes to recover DNA damages created following replication blockage in vertebrate cells.
5. ASF1 is essential for viability and chromatin assembly during DNA replication in vertebrate cells.
6. CAF-1-mediated rapid nucleosome assembly is essential for DNA replication and cell division in vertebrate cells.
7. HDAC2 is necessary for controls of IgM H and L-chain gene expressions via EBF1, Pax5, Ikaros, Aiolos and E2A gene expressions.

Report

(4 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (36 results)

All 2007 2006 2005 2004

All Journal Article (35 results) Book (1 results)

  • [Journal Article] Essential role of CAF-1-mediated rapid nucleosome assembly for DNA replication and cell division in vertebrate cells2007

    • Author(s)
      Takami, Y., Ono, T., Fukagawa, T., Shibahara, K., Nakayama, T.
    • Journal Title

      Mol. Biol. Cell 18

      Pages: 129-141

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Collaborative roles of rH2AX and the Rad51 paralog Xrcc3 in homologous recombinational repair2007

    • Author(s)
      Sonoda, E., Zhao, G.-Y., Kohzaki, M., Dhar, P.K., Kikuchi, K., Redon, C., Pilch, D.R., Bonner, W.M., Nakano, A., Watanabe, M., Nakayama, T., Takeda, S., Takami, Y.
    • Journal Title

      DNA Repair 6

      Pages: 280-292

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Cleavage and cytoplasmic relocalisation of histone deacetylase 3 is important for apoptosis2007

    • Author(s)
      Escaffit, F., Vaute, O., Chevillard-Briet, M., Segui, B., Takami, Y., Nakayama, T., Trouche, D.
    • Journal Title

      Mol. Cell. Biol. 27

      Pages: 554-567

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] HDAC2 controls IgM H and L-chain gene expressions via EBF1, Pax5, Ikaros, Aiolos and E2A gene expressions2007

    • Author(s)
      Nakayama, M., Suzuki, H., Yamamoto-Nagamatsu, N., Barman, H.K., Kikuchi, H., Takami, Y., Toyonaga, K, Yamashita, K., Nakayama, T.
    • Journal Title

      Genes Cells 12

      Pages: 359-373

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Essential role of CAF-1-mediated rapid nucleosome assembly for DNA replication and cell division in vertebrate cells.2007

    • Author(s)
      Takami, Y, Ono, T., Fukagawa, T., Shibahara, K., Nakayama, T.
    • Journal Title

      Mol. Biol. Cell 18

      Pages: 129-141

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Collaborative roles of rH2AX and the Rad51 paralog Xrcc3 in homologous recombinational repair.2007

    • Author(s)
      Sonoda, E., Zhao, G-Y, Kohzaki, M., Dhar, P.K., Kikuchi, K., Redon, C., Pilch, D.R., Bonner, W.M., Nakano, A., Watanabe, M., Nakayama, T., Takeda, S., Takami, Y.
    • Journal Title

      DNA Repair 6

      Pages: 280-292

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Cleavage and cytoplasmic relocalisation of histone deacetylase 3 is important for apoptosis.2007

    • Author(s)
      Escaffit, F., Vaute, O., Chevillard-Briet, M., Segui, B., Takami, Y., Nakayama, T., Trouche, D.
    • Journal Title

      Mol. Cell. Biol. 27

      Pages: 554-567

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] HDAC2 controls IgM H and L-chain gene expressions via EBF1, Pax5, Ikaros, Aiolos and E2A gene expressions.2007

    • Author(s)
      Nakayama, M., Suzuki, H., Yamamoto-Nagamatsu, N., Barman, H.K., Kikuchi, H., Takami, Y., Toyonaga, K., Yamashita, K., Nakayama, T.
    • Journal Title

      Genes Cells 12

      Pages: 359-373

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Essential role of CAF-1-mediated rapid nucleosome assembly for DNA replication and cell division in vertebrate cells2007

    • Author(s)
      Takami, Y., Ono, T., Fukagawa, T., Shibahara, K., Nakayama, T.
    • Journal Title

      Mol.Biol.Cell 18

      Pages: 129-141

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Cleavage and cytoplasmic relocalisation of histone deacetylase 3 is important for apoptosis2007

    • Author(s)
      Escaffit, F., Vaute, O., Chevillard-Briet, M., Segui, B., Takami, Y., Nakayama, T., Trouche, D.
    • Journal Title

      Mol.Cell.Biol. 27

      Pages: 554-567

    • Related Report
      2006 Annual Research Report
  • [Journal Article] HDAC2 controls lgM H and L-chain gene expressions via EBF1, Pax5, Ikaros, Aiolos and E2A gene expressions2007

    • Author(s)
      Nakayama, M., Suzuki, H., Yamamoto-Nagamatsu, N., Barman, H.K., Kikuchi, H., Takami, Y., Toyonaga, K., Yamashita, K., Nakayama, T.
    • Journal Title

      Genes Cells 12

      Pages: 359-373

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Asfl is required for viability and chromatin assembly during DNA replication in vertebrate cells2006

    • Author(s)
      Sanematsu, F., Takami, Y., Barman, H.K., Fukagawa, T., Ono, T., Shibahara, K., Nakayama, T.
    • Journal Title

      J. Biol. Chem. 281

      Pages: 13817-13827

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Histone acetyltransferase 1 is dispensable for replication-coupled chromatin assembly but contributes to recover DNA damages created following replication blockage in vertebrate cells2006

    • Author(s)
      Barman, H.K., Takami, Y., Ono, T., Nishijima, H., Sanematsu, F., Shibahara, K., Nakayama, T.
    • Journal Title

      Biochem. Biophys. Res. Commun. 345

      Pages: 1547-1557

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Reviews and Protocols in DT40 Research : Participation of histones, histone modifying enzymes and histone chaperones in vertebrate cell functions.2006

    • Author(s)
      Kikuchi, H., Barman, H.K., Nakayama, M., Takami, Y, Nakayama, T.
    • Journal Title

      Springer-Verlag

      Pages: 225-243

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Asfl is required for viability and chromatin assembly during DNA replication in vertebrate cells.2006

    • Author(s)
      Sanematsu, F., Takami, Y., Barman, H.K., Fukagawa, T., Ono, T., Shibahara, K., Nakayama, T.
    • Journal Title

      J. Biol. Chem. 281

      Pages: 13817-13827

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Histone acetyltransferase 1 is dispensable for replication-coupled chromatin assembly but contributes to recover DNA damages created following replication blockage in vertebrate cells.2006

    • Author(s)
      Barman, H.K., Takami, Y., Ono, T., Nishijima, H., Sanematsu, F., Shibahara, K., Nakayama, T.
    • Journal Title

      Biochem. Biophys. Res. Commun. 345

      Pages: 1547-1557

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Asf1 is required for viability and chromatin assembly during DNA replication in vertebrate cells2006

    • Author(s)
      Sanematsu, F., Takami, Y., Barman, H.K., Fukagawa, T., Ono, T., Shibahara, K., Nakayama, T.
    • Journal Title

      J.Biol.Chem. 281

      Pages: 13817-13827

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Histone acetyltransferase 1 is dispensable for replication-coupled chromatin assembly but contributes to recover DNA damages created following replication blockage in vertebrate cells2006

    • Author(s)
      Barman, H.K., Takami, Y., Ono, T., Nishijima, H., Sanematsu, F., Shibahara, K., Nakayama, T.
    • Journal Title

      Biochem.Biophys.Res.Commun. 345

      Pages: 1547-1557

    • Related Report
      2006 Annual Research Report
  • [Journal Article] GCN5 : a supervisor in all-inclusive control of vertebrate cell cycle progression through transcription regulation of various cell cycle-related genes2005

    • Author(s)
      Kikuchi, H., Takami, Y., Nakayama, T.
    • Journal Title

      Gene 347

      Pages: 83-97

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Role of NAD-dependent deacetylases SIRT1 and SIRT2 in radiation and cisplatin-induced cell death in vertebrate cells2005

    • Author(s)
      Matsushita, N., Takami, Y., Kimura, M., Tachiiri, S., Ishiai, M., Nakayama, T., Takata, M.
    • Journal Title

      Genes Cells 10

      Pages: 321-332

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Different roles of N-terminal and C-terminal halves of HIRA in transcription regulation of cell cycle-related genes that contribute to control of vertebrate cell growth2005

    • Author(s)
      Ahmad, A., Kikuchi, H., Takami, Y., Nakayama, T.
    • Journal Title

      J. Biol. Chem. 280

      Pages: 32090-32100

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] a supervisor in all-inclusive control of vertebrate cell cycle progression through transcription regulation of various cell cycle-related genes.2005

    • Author(s)
      Kikuchi, H., Takami, Y., Nakayama, T.GCN5
    • Journal Title

      Gene 347

      Pages: 83-97

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Role of NAD-dependent deacetylases SIRT1 and SIRT2 in radiation and cisplatin -induced cell death in vertebrate cells.2005

    • Author(s)
      Matsushita, N., Takami, Y, Kimura, M., Tachiiri, S., Ishiai, M., Nakayama, T., Takata, M.
    • Journal Title

      Genes Cells 10

      Pages: 321-332

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Different roles of N-terminal and C-terminal halves of HIRA in transcription regulation of cell cycle-related genes that contribute to control of vertebrate cell growth.2005

    • Author(s)
      Ahmad, A., Kikuchi, H., Takami, Y., Nakayama, T.
    • Journal Title

      J. Biol. Chem. 280

      Pages: 32090-32100

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] GCN5 : a supervisor in all-inclusive control of vertebrate cell cycle progression through transcription regulation of various cell cycle-related genes.2005

    • Author(s)
      Kikuchi, H., Takami, Y., Nakayama, T.
    • Journal Title

      Gene 347

      Pages: 83-97

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Role of NAD-dependent deacetylases SIRT1 and SIRT2 in radiation and cisplatin-induced cell death in vertebrate cells.2005

    • Author(s)
      Matsushita, N., Takami, Y., Kimura, M., Tachiiri, S., Ishiai, M., Nakayama, T.Takata, M.
    • Journal Title

      Genes Cells 10

      Pages: 321-332

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Different roles of N-terminal and C-terminal halves of HIRA in transcription regulation of cell cycle-related genes that contribute to control of vertebrate cell growth.2005

    • Author(s)
      Ahmad, A., Kikuchi, H., Takami, Y., Nakayama, T.
    • Journal Title

      J.Biol.Chem. 280

      Pages: 32090-32100

    • Related Report
      2005 Annual Research Report
  • [Journal Article] GCN5:a supervisor in all-inclusive control of vertebrate cell cycle progression through transcription regulation of various cell cycle-related genes.2005

    • Author(s)
      Kikuchi, H., Takami, Y., Nakayama, T
    • Journal Title

      Gene 347

      Pages: 83-97

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Growth inhibition and mutagenesis induced in Escherichia coli by dihydropyrazines with DNA strand-cleaving activity2004

    • Author(s)
      Takechi, S., Yamaguchi, T., Nomura, H., Minematsu, T., Nakayama, T.
    • Journal Title

      Mutation Research 560

      Pages: 49-55

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Dicer is essential for formation of the heterochromatin structure in vertebrate cells2004

    • Author(s)
      Fukagawa, T., Nogami, M., Yoshikawa, M., Ikeno, M., Okazaki, T., Takami, Y., Nakayama, T., Oshimura, M.
    • Journal Title

      nature Cell Biology 8

      Pages: 784-791

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] WD dipeptide motifs and LXXLL motif of chicken HIRA are essential for interactions with the p48 subunit of chromatin assembly factor-1 and histone deacetylase-2 in vitro and in vivo2004

    • Author(s)
      Ahmad, A., Takami, Y., Nakayama, T.
    • Journal Title

      Gene 342

      Pages: 125-136

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Growth inhibition and mutagenesis induced in Escherichia coli by dihydropyrazines with DNA strand- cleaving activity.2004

    • Author(s)
      Takechi, S., Yamaguchi, T., Nomura, H., Minematsu, T., Nakayama, T.
    • Journal Title

      Mutation Research 560

      Pages: 49-55

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Dicer is essential for formation of the heterochromatin structure in vertebrate cells.2004

    • Author(s)
      Fukagawa, T., Nogami, M., Yoshikawa, M., Ikeno, M., Okazaki, T., Takami, Y., Nakayama, T., Oshimura, M.
    • Journal Title

      nature Cell Biology 8

      Pages: 784-791

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary 2004 Annual Research Report
  • [Journal Article] WD dipeptide motifs and LXXLL motif of chicken HIRA are essential for interactions with the p48 subunit of chromatin assembly factor-1 and histone deacetylase-2 in vitro and in vivo.2004

    • Author(s)
      Ahmad, A., Takami, Y., Nakayama, T.
    • Journal Title

      Gene 342

      Pages: 125-136

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary 2004 Annual Research Report
  • [Journal Article] Growth inhibition and mutagenesis induced in Escherichia coli by dihydropyrazines with DNA strand-cleaving activity.2004

    • Author(s)
      Takechi, S., Yamaguchi, T., Nomura, H., Minematsu, T., Nakayama, T.
    • Journal Title

      Mutation Research 560

      Pages: 49-55

    • Related Report
      2004 Annual Research Report
  • [Book] Reviews and Protocols in DT40 Research : Participation of histones, histone modifying enzymes and histone chaperones in vertebrate cell functions2006

    • Author(s)
      Kikuchi, H., Barman, H.K., Nakayama, M., Takami, Y., Nakayama, T.
    • Publisher
      Springer-Verlag
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary

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Published: 2004-04-01   Modified: 2016-04-21  

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