• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Synthesis of a compound libraries inspired by privileged structures of natural products

Research Project

Project/Area Number 16310150
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Living organism molecular science
Research InstitutionTohoku University (2005-2007)
Nagoya University (2004)

Principal Investigator

ARIMOTO Hirokazu  Tohoku University, Tohoku University, Graduate School of Life Sciences, Professor (60262789)

Project Period (FY) 2004 – 2007
Project Status Completed (Fiscal Year 2007)
Budget Amount *help
¥16,480,000 (Direct Cost: ¥15,400,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2007: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2006: ¥2,700,000 (Direct Cost: ¥2,700,000)
Fiscal Year 2005: ¥5,000,000 (Direct Cost: ¥5,000,000)
Fiscal Year 2004: ¥4,100,000 (Direct Cost: ¥4,100,000)
Keywordsbiological activity / endogenous compound / library / 天然物 / 全合成 / オキサゾール / Beckmannn転位 / セオブロキシド / エリナシン / ケンドマイシン
Research Abstract

Natural product is a rich source of bioactive substances. In this research project, I focused on the preparation of a compound library based on important partial structures (the privileged structures) involved in natural products.
At first I established the simple and efficient synthetic route to a plant growth regulator, theobroxide and its derivatives. Synthesis of a cytosolic phospholipase A2 inhibitor, pinnaic acid. Has also been established. Studies toward an antibiotic kendomycin, a cytotoxic material nakiterpiosin, aκ-opicid acceptor agonist, erinacine E were investigated, and their progress have been published as preliminary reports.
In the course of the research for identification of novel endogenous bioactive low molecular-weight compounds, Prof. Akaike group at Kumamoto University and I have reported an existence of 8-nitro-cGMP in various cell lines. Preliminary studies suggested that the molecule should play an important roles at the time of infection and inflammation in our bodies. The design and synthesis of chemical probe molecule are underway.
Furthermore, molecular shape of huge marine natural product, palytoxin, was elucidated by the synchrotron X-rays small angle scattering technique (SAXS). Direct observation of molecular shapes in solutions was accomplished with natural products for the first time. Palytoxin was proved to forms an associate dimer. Palytoxin have been shown to act on Na/K ATPase, and relationship of the associative nature with its biological activities should be an interesting future problem. Synthetic of a palytoxin-based library has investigated in this context.

Report

(5 results)
  • 2007 Annual Research Report   Final Research Report Summary
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (25 results)

All 2007 2006 2005

All Journal Article (25 results) (of which Peer Reviewed: 11 results)

  • [Journal Article] Molecular Shape of Palytoxin in Aqueous Solution2007

    • Author(s)
      T. Inuzuka, T. Fujisawa, H. Arimoto, D. Uemura
    • Journal Title

      Org. Biomol. Chem. 5

      Pages: 897-899

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Ring-closing Metathesis Approach to a 16-membered Macrocycle of Kendomycin2007

    • Author(s)
      T. Sengoku, D. Uemura, H. Arimoto
    • Journal Title

      Chem. Lett. 2007

      Pages: 726-727

    • NAID

      130004866783

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Asymmetric total synthesis of Pinnaic Acid2007

    • Author(s)
      S. Xu, H. Arimoto, D. Uemura
    • Journal Title

      Angew. Chem. Int. Ed. 46

      Pages: 5746-5749

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Studies toward the total synthesis of nakiterpiosin: construction of the CDE ring system by a transannular Diels-Alder strategy2007

    • Author(s)
      T. Ito, M. Ito, H。Arimoto, H. Takamura, D. Uemura,
    • Journal Title

      Tetrahedron Letters 48

      Pages: 5465-5469

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Protein S- guanylation by the biological signal 8-nitroguanosine 3',5'-cyclicmonophosphate2007

    • Author(s)
      T. Sawa, M. H. Zaki, T. Okamoto, T. Akuta, Y. Tokutomi, S. K. Mitsuyama, H. Ihara, A. Kobayashi, M. Yamamoto, S. Fujii, H. Arimoto, T. Akaike
    • Journal Title

      Nature Chemical Biology 3

      Pages: 727-735

    • NAID

      120002467822

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Molecular Shape of Palytoxin in Aqueous Solution2007

    • Author(s)
      Inuzuka, T.; Fujisawa, T.; Arimoto; H.; Uemura, D.
    • Journal Title

      Org. Biomol. Chem 5

      Pages: 897-899

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Ring-closing Methathesis Approach to a 16-Memberd Macrocycle of Kendomycin2007

    • Author(s)
      Sengoku, T.; Uemura, D.; Arimoto, H.
    • Journal Title

      Chem. Lett

      Pages: 726-727

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Asymmetric Total Synthesis of Pinnaic Acid2007

    • Author(s)
      Xu, S.; Arimoto, H.; Uemura, D.
    • Journal Title

      Angew. Chem. Int. Ed 46

      Pages: 5746-5749

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Studies toward the total synthesis of nakiterpiosin: construction of the CDE ring system by a transannular Diels-Alder strategy2007

    • Author(s)
      Ito, T.; Ito, M.; Arimoto, H; Takamura, H.; Uemura, D.
    • Journal Title

      Tetrahedron Lett 48

      Pages: 5465-5469

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Protein S- guanylation by the biological signal 8-nitroguanosine 3'',5''-cyclic monophosphate2007

    • Author(s)
      Sawa, T.; Zaki, M. H.; Okamoto, T.; Akuta, T.;Tokutomi, Y.; Mitsuyama, S. K.-; lhara, H.; Kobayashi, A.; Yamamoto, M.; Fujii, S.; Arimoto, H.; Akaike T
    • Journal Title

      Nat Chem. Biol 3

      Pages: 727-735

    • NAID

      120002467822

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Studies toward the total synthesis of nakiterpiosin: construction of the CDE ring system by a transannular Diels-Alder strategy2007

    • Author(s)
      T. Ito, M. Ito, H。 Arimoto, H. Takamura, D. Uemura
    • Journal Title

      Tetrahedron Letters 48

      Pages: 5465-5469

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Protein S-guanylation by the biological signal 8-nitroguanosine 3',5'-cyclic monophosphate2007

    • Author(s)
      T. Sawa, M. H. Zaki, T. Okamoto, T. Akuta, Y. Tokutomi, S. K. Mitsuyama, H. Ihara, A. Kobayashi, M. Yamamoto, S. Fujii, H. Arimoto, T. Akaike
    • Journal Title

      Nature Chemical Biology 3

      Pages: 727-735

    • NAID

      120002467822

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of proteins from venom of the paralytic spider wasp, Cyphononyx dorsalis2007

    • Author(s)
      T.Yamamoto, H.Arimoto, T.Kinumi, Y.Oba, D.Uemura
    • Journal Title

      Insect Biochem. Mol. Biol. 37・3

      Pages: 278-286

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Molecular Shape of Palytoxin in Aqueous Solution2007

    • Author(s)
      T.Inuzuka, T.Fujisawa, H.Arimoto, D.Uemura
    • Journal Title

      Org. Biomol. Chem. 5・6

      Pages: 897-899

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Ring-closing Metathesis Approach to a 16-Memberd Macrocycle of Kendomycin2007

    • Author(s)
      T.Sengoku, D.Uemura, H.Arimoto
    • Journal Title

      Chem. Lett. 36・6

      Pages: 726-727

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Effect os Ascorbic acid on Chemiluminescence of Polyphenols2006

    • Author(s)
      N. Inoue, K. Akasaka, H. Arimoto, H. Ohrui
    • Journal Title

      Biosci. Biotech. Biochem. 69

      Pages: 1517-1520

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Possibility of a non-amino acid pathway in the biosynthesis of marine-derived oxazoles2006

    • Author(s)
      T.Ichino, H. Arimoto, D. Uemura
    • Journal Title

      Chem. Commun. 2006

      Pages: 1742-1744

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Effect of Ascorbic Acid on Chemiluminescence of Polyphenols2006

    • Author(s)
      Inoue, N.; Akasaka, K.; Arimoto, H.; Ohrui, H.
    • Journal Title

      Biosci. Biotech. Biochem 69

      Pages: 1517-1520

    • NAID

      10018530542

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Possibility of a non-amino acid pathway in the biosynthesis of marine-derived oxazoles2006

    • Author(s)
      Ichino, T.; Arimoto, H.; Uemura, D.
    • Journal Title

      Chem. Commun

      Pages: 1742-1744

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Possibility of a non-amino acid pathway in the biosynthesis of marine-derived oxazoles2006

    • Author(s)
      T.Ichino, H.Arimoto, D.Uemura
    • Journal Title

      Chemical communications (印刷中)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Concise synthesis of a plant growth regulator theobroxide2005

    • Author(s)
      H. Arimoto, T. Shimano, D. Uemura
    • Journal Title

      Agric. Food. Chem. 53

      Pages: 3863-3866

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Synthetic studies on sugar-fused erinacines2005

    • Author(s)
      A. Sato, T. Masuda, H. Arimoto
    • Journal Title

      Org. Biomol. Chem. 3

      Pages: 2231-2233

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2007 Final Research Report Summary
    • Peer Reviewed
  • [Journal Article] Concise synthesis of a plant growth regulator theobroxide2005

    • Author(s)
      Arimoto, H.; Shimano, T.; Uemura, D.
    • Journal Title

      Agric. Food Chem 53

      Pages: 3863-3866

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Synthetic Studies on Sugar-fused Erinacines2005

    • Author(s)
      Sato, A.; Masuda, T.; Arimoto, H.; Uemura, D.
    • Journal Title

      Org. Biomol. Chem 3

      Pages: 2231-2233

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2007 Final Research Report Summary
  • [Journal Article] Concise synthesis of a plant growth regulator, theobroxide2005

    • Author(s)
      H.Arimoto, T.Shimano, D.Uemura
    • Journal Title

      Journal of Agricultural and Food Chemistry 53(印刷中)

    • Related Report
      2004 Annual Research Report

URL: 

Published: 2004-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi