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Analyses of molecular genetic mechanism involved in the sporophytic self-incompatibility of Ipomoea.

Research Project

Project/Area Number 16380005
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Breeding science
Research InstitutionMie University

Principal Investigator

KOWYAMA Yasuo  Mie University, Graduate School of Bioresources, Professor, 大学院生物資源学研究科, 教授 (80024579)

Co-Investigator(Kenkyū-buntansha) KAKEDA Katsuyuki  Mie University, Graduate School of Bioresources, Associate Professor, 大学院生物資源学研究科, 助教授 (50221867)
Project Period (FY) 2004 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥15,400,000 (Direct Cost: ¥15,400,000)
Fiscal Year 2006: ¥4,900,000 (Direct Cost: ¥4,900,000)
Fiscal Year 2005: ¥5,000,000 (Direct Cost: ¥5,000,000)
Fiscal Year 2004: ¥5,500,000 (Direct Cost: ¥5,500,000)
KeywordsSelf-incompatibility / Convolvulaceae / Ipomoea / Sweet potato relatives / Sexual reproduction / Molecular genetics / Genome analysis / 胞子体型自家不和合性
Research Abstract

Self-incompatibility (SI) is a genetic system that prevents self-fertilization and thereby promotes out-crossing to maintain genetic diversity in plant populations. The SI system works through the rejection of self-pollen following the recognition of self and non-self pollen by the pistil. In the plant family, Convolvulaceae, several species of Ipomoea possess a sporophytic type of SI that is regulated by a single multiallelic S-locus. The present study was performed to identify the S-locus genes involved in the self-pollen recognition and to reveal molecular mechanism of the SI system in Ipomoea. Research results obtained are summarized as follows. (1) Fine genetic map of DNA markers was constructed in the vicinity of the S-locus. (2) Using a map-based positional cloning strategy, several genomic clones covering the S-locus were screened from bacterial artificial chromosome (BAC) and cosmid libraries of three S haplotypes. (3) Sequence analysis of the isolated clones showed that the S-loci were delimited to the S haplotype-specific divergent regions (SDRs) spanning 30 to 95 kb in size. (4) From gene expression analyses by Northern blot and RT-PCR of mRNAs, three stigma-specific genes (SE1, SE2, SEA) and an anther-specific gene (AB2) in the SDRs were identified as candidates encoding pistil and pollen determinants of the SI, respectively. (5) Transformants introduced with RNAi constructs of the stigma-specific genes showed no changes in the SI phenotypes, indicating that the stigma-specific genes might be functioned as complementary. (6) The present study revealed that these stigma specific candidates showed no homologies with the S-locus genes reported to date from other plants, and suggests that a unique molecular mechanism is involved in the SI system of Ipomoea plants.

Report

(4 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (28 results)

All 2007 2006 2005 2004

All Journal Article (26 results) Book (2 results)

  • [Journal Article] Physical size of the S locus region defined by genetic recombination and genome sequencing in Ipomoea trifida, Convolvulaceae.2007

    • Author(s)
      Rahman, M.H., et al.
    • Journal Title

      Sexual Plant Reproduction 20・2(online published)(印刷中)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Expression of stigma- and anther-specific genes located in the S locus region of Ipomoea trifida.2007

    • Author(s)
      Rahman, M.H., et al.
    • Journal Title

      Sexual Plant Reproduction 20・2(online published)(印刷中)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Physical size of the S locus region defined by genetic recombination and genome sequencing in Ipomoea trifida, Convolvulaceae.2007

    • Author(s)
      Rahman, M.H., Tsuchiya, T., Suwabe, K., Kohori, J., Tomita, R.N., Kagaya, Y., Kobayashi, I., Kakeda, K., Kowyama, Y.
    • Journal Title

      Sexual Plant Reproduction online published

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Expression of stigma-and anther-specific genes located in the S locus region of Ipomoea trifida.2007

    • Author(s)
      Rahman, M.H., Uchiyama, M., Kuno, M., Hirashima, N., Suwabe, K, Tsuchiya, T., Kagaya, Y., Kobayashi, I., Kakeda, K., Kowyama, Y.
    • Journal Title

      Sexual Plant Reproduction online published

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Physical size of the S locus region defined by genetic recombination and genome sequencing in Ipomoea trifida, Convolvulaceae.2007

    • Author(s)
      Rahman, M.H., Tsuchiya, T., Suwabe, K., Kohori, J., Tomita, R.N., Kagaya, Y., Kobayashi, I., Kakeda, K., Kowyama, Y.
    • Journal Title

      Sexual Plant Reproduction 20・2(印刷中)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Expression of stigma- and anther-specific genes located in the S locus region of Ipomoea trifida.2007

    • Author(s)
      Rahman, M.H., Uchiyama, M., Kuno, M., Hirashima, N., Suwabe, K, Tsuchiya, T., Kagaya, Y., Koba- yashi, I., Kakeda, K., Kowyama, Y.
    • Journal Title

      Sexual Plant Reproduction 20・2(印刷中)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Gene expression analyses of the S-locus region conferring a sporophytic self-incompatibility in Ipomoea, Convolvulaceae.2006

    • Author(s)
      Kowyama, Y., et al.
    • Journal Title

      Abstract of the 19th International Congress on Sexual Plant Reproduction 19

      Pages: 166-167

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Gene expression analyses of the S-locus region confer- ring a sporophytic self-incompatibility in Ipomoea, Convolvulaceae.2006

    • Author(s)
      Kowyama, Y., Rahman, M.H., Suwabe, K., Uchiyama, M., Kuno, M., Kakeda, K., Tsuchiya, T.
    • Journal Title

      Abstract of the 19th International Congress on Sexual Plant Reproduction 19

      Pages: 166-167

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Gene expression analyses of the S-locus region conferring a sporophytic self-incompatibility in Ipomoea, Convolvulaceae.2006

    • Author(s)
      Kowyama, Y., Rahman, M.H., Suwabe, K., Uchiyama, M., Kuno, M., Kakeda, K., Tsuchiya, T.
    • Journal Title

      Abstract of the 19th International Congress on Sexual Plant Reproduction 2006・7

      Pages: 166-167

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Identification of candidate genes involved in sporophytic self-incompati- bility of Ipomoea trifida, a close relative to sweet potato.2006

    • Author(s)
      Tsuchiya, T., Suwabe, K., Kuno, M., Uchiyama, M., Rahman, M.H., Kakeda, K., Kowyama, Y.
    • Journal Title

      Abstract of the 8th International Congress of Plant Molecular Biology 2006・8

      Pages: 211-212

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Analyses of gene organization and expression in the S-locus region conferring a sporophytic self-incompatibility of Ipomoea trifida.2006

    • Author(s)
      Rahman, M.H., Tsuchiya, T., Suwabe, K., Kakeda, K., Kowyama, Y.
    • Journal Title

      第14回日本育種学会中部地区談話会講演要旨 14

      Pages: 6-6

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Genomic structure covering the S-locus in Ipomoea trifida, a wild species of sweet potato.2005

    • Author(s)
      Rahman, M.H., Suwabe, K., Tsuchiya, T., Kowyama, Y.
    • Journal Title

      Abstract of 10th International Congress of SABRAO 10

    • Related Report
      2005 Annual Research Report
  • [Journal Article] ニホンナシの自家不和合性に関する研究.(第41報)2005

    • Author(s)
      平尾香那子, 神山康夫, 平塚 伸
    • Journal Title

      園芸学会講演要旨 2005・4

      Pages: 315-315

    • Related Report
      2005 Annual Research Report
  • [Journal Article] サツマイモ野生2倍体種における自家不和合性遺伝子座領域の塩基配列解析2005

    • Author(s)
      久野壮志, 内山美奈, Md.Habibur Rahman, 諏訪部圭太, 土屋 亨, 掛田克行, 神山康夫
    • Journal Title

      第13回日本育種学会中部地区談話会講演要旨 13

      Pages: 1-2

    • Related Report
      2005 Annual Research Report
  • [Journal Article] サツマイモ野生二倍体種における柱頭特異的発現遺伝子(SE-1)のRNAi形質転換体の解析2005

    • Author(s)
      小黒泰輔, 伊地知豊美, 柿本知香, 神山康夫, 掛田克行
    • Journal Title

      第13回日本育種学会中部地区談話会講演要旨 13

      Pages: 3-4

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Genetic mapping of AFLP/AMF-derived DNA markers in the vicinity of the self-incompatibility locus in Ipomoea.2004

    • Author(s)
      Tomita, R.N., et al.
    • Journal Title

      Sexual Plant Reproduction 16・6

      Pages: 265-272

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular characterization of a 313-kb genomic region containing the self-incompatibility locus of Ipomoea trifida2004

    • Author(s)
      Tomita, R.N., et al.
    • Journal Title

      Breeding Science 54・2

      Pages: 165-175

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Visualization of the S-locus region in Ipomoea trifida : toward positional cloning of self-incompatibility genes.2004

    • Author(s)
      Suzuki, G., et al.
    • Journal Title

      Chromosome Research 12・3

      Pages: 475-481

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Genetic mapping of AFLP/AMF-derived DNA markers in the vicinity of the self-incompatibility locus in Ipomoea.2004

    • Author(s)
      Tomita, R.N., Fukami, K., Takayama, S., Kowyama, Y.
    • Journal Title

      Sexual Plant Reproduction 16

      Pages: 265-272

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Molecular characterization of a 313-kb genomic region containing the self-incompatibility locus of Ipomoea trifida2004

    • Author(s)
      Tomita, R.N., Suzuki, G, Yoshida, K., Yano, Y., Tsuchiya, T., Kakeda, K., Mukai, Y, Kowyama, Y.
    • Journal Title

      Breeding Science 54

      Pages: 165-175

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Visualization of the S-locus region in Ipomoea trifida : toward positional cloning of self-incompatibility genes.2004

    • Author(s)
      Suzuki, G, Tanaka, S., Yamamoto, M., Tomita, R.N., Kowyama, Y., Mukai, Y.
    • Journal Title

      Chromosome Research 12

      Pages: 475-481

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Genetic mapping of AFLP/AMF-derived DNA markers in the vicinity of the self-incompatibility locus in Ipomoea2004

    • Author(s)
      Tomita, R.N.
    • Journal Title

      Sexual Plant Reproduction 16

      Pages: 265-272

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Molecular characterization of a 313-kb genomic region containing the self-incompatibility locus of Ipomoea trifida,2004

    • Author(s)
      Tomita, R.N.
    • Journal Title

      Breeding Science 54

      Pages: 165-175

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Visualization of the S-locus region in Ipomoea trifida : toward positional cloning of self-incompatibility genes.2004

    • Author(s)
      Suzuki, G.
    • Journal Title

      Chromosome Research 12

      Pages: 475-481

    • Related Report
      2004 Annual Research Report
  • [Journal Article] サツマイモ野生種のS遺伝子座領域における葯特異的発現遺伝子の解析2004

    • Author(s)
      平嶋奈津子
    • Journal Title

      育種学研究 6・2

      Pages: 159-159

    • Related Report
      2004 Annual Research Report
  • [Journal Article] サツマイモ野生種のS遺伝子座領域における柱頭特異的発現遺伝子の解析2004

    • Author(s)
      内山美奈
    • Journal Title

      育種学研究 6・2

      Pages: 160-160

    • Related Report
      2004 Annual Research Report
  • [Book] 新編農学大事典,遺伝子の単離(分担執筆)(山崎耕宇他監修)2004

    • Author(s)
      神山康夫
    • Total Pages
      1786
    • Publisher
      養賢堂
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Book] 新編 農学大事典2004

    • Author(s)
      山崎耕宇他監修
    • Total Pages
      1786
    • Publisher
      養賢堂
    • Related Report
      2004 Annual Research Report

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Published: 2004-04-01   Modified: 2016-04-21  

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