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Precise chromosomal location and candidate genes for a new QTL affecting growth identified in the wild mouse

Research Project

Project/Area Number 16380186
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied animal science
Research InstitutionNagoya University

Principal Investigator

ISHIKAWA Akira  Nagoya University, Graduate School of Bioagricultural Sciences, Associate Professor, 大学院生命農学研究科, 助教授 (20211724)

Co-Investigator(Kenkyū-buntansha) NAMIKAWA Takao  Nagoya University, Graduate School of Bioagricultural Sciences, Professor, 大学院生命農学研究科, 教授 (70111838)
EBIHARA Shizufumi  Nagoya University, Graduate School of Bioagricultural Sciences, Professor, 大学院生命農学研究科, 教授 (50135331)
Project Period (FY) 2004 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥15,700,000 (Direct Cost: ¥15,700,000)
Fiscal Year 2006: ¥2,800,000 (Direct Cost: ¥2,800,000)
Fiscal Year 2005: ¥5,500,000 (Direct Cost: ¥5,500,000)
Fiscal Year 2004: ¥7,400,000 (Direct Cost: ¥7,400,000)
Keywordsmouse / growth / QTL / quantitative trait / candidate gene / chromosome / congenic strain
Research Abstract

We have previously mapped a new QTL (named Pbwgl) for body weight and growth on chromosome 2 that was identified in the genetic resources of a wild mouse population in the Philippines. We have developed a congenic strain for Pbwgl with a genetic background of the C57BL/6J strain and named it B6.Cg-Pbwgl. Our final objective is to identify a causative gene for Pbwgl. In this study, we performed following investigations: (1) phenotypic characterization of B6.Cg-Pbwgl, (2) development of subcongenic strains using F2 progeny from an intercross between B6.Cg-Pbwgl and C57BL/6J strains, (3) precise mapping of Pbwg.l'by QTL analysis in the F2 population, and (4) candidate gene search for Pbwgl by comprehensive geneexpression analysis. B6.Cg-Pbwg1 was characterized by higher body weight gain at 1-3 weeks of age and lower white fat pad weight than C57BL/6J. QTL analysis in the F2 revealed that Pbwgl was not constructed from only one locus but from 8 loci for body composition traits such as lean body weight and fat pad weight. We succeeded in development of 14 subcongenic strains that will be used for further narrowing down the body composition QTLs. We were able to find several candidate genes for each of the body composition QTLs by microarray analysis and database search. Experimental condition setting for real-time PCR analysis was completed. In the near future, we will able to reduce the number of candidate genes by the real-time PCR analysis of the candidate genes selected here and phenotypic characterization of the subcongenics developed.

Report

(4 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • Research Products

    (17 results)

All 2007 2006 2005

All Journal Article (17 results)

  • [Journal Article] A growth QTL (Pbwg 1) region of mouse chromosome 2 contains closely linked loci affecting growth and body composition2007

    • Author(s)
      Ishikawa, A.
    • Journal Title

      Mammalian Genome 18(in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification of quantitative trait loci affecting shank length, body weight and carcass weight from the Japanese cockfighting chicken breed, Oh-Shamo (Japanese Large Game)2007

    • Author(s)
      Tsudzuki, M.
    • Journal Title

      Cytogenetics and Genome Research (Special issue)(in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] A growth QTL (Pbwgl) region of mouse chromosome 2 contains closely linked loci affecting growth and body composition2007

    • Author(s)
      Ishikawa, A. et al.
    • Journal Title

      Mammalian Genome 18,(in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Identification of quantitative trait loci affecting shank length, body weight and carcass weight from the Japanese cockfighting chicken breed, Oh-Shamo (Japanese Large Game)2007

    • Author(s)
      Tsudzuki, M. et al.
    • Journal Title

      Cytogenetics and Genome Research, Special issue (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] A growth QTL (Pbwgl) region of mouse chromosome 2 contains closely linked loci affecting growth and body composition2007

    • Author(s)
      Ishikawa, A.
    • Journal Title

      Mammalian Genome 18(in press)

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Detection of quantitative trait loci causing abnormal spermatogenesis and reduced testis weight in the small testis (Smt) mutant mouse2006

    • Author(s)
      Bolor, H.
    • Journal Title

      Experimental Animals 55・2

      Pages: 97-108

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Annual Research Report 2006 Final Research Report Summary
  • [Journal Article] Detection of quantitative trait loc causing abnormal spermatogenesis and reduced testis weight in the small testis (Smt) mutant mouse2006

    • Author(s)
      Bolor, H. et al.
    • Journal Title

      Experimental Animals 55・2

      Pages: 97-108

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Detection of quantitative trait loci causing abnormal spermatogenesis and reduced testis weight in the small testis (Smt) mutant mouse2006

    • Author(s)
      Bolor, H.
    • Journal Title

      Experimental Animals 55・2 (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Quantitative trait loci for glomerulosclerosis, kidney weight and body weight in the focal glomerulosclerosis mouse model2005

    • Author(s)
      Kim, E.-H.
    • Journal Title

      Experimental Animals 54・4

      Pages: 319-325

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Further mapping of quantitative trait loci for postnatal growth in an intersubspecific baekcross of wild Mus musculus castaneus and C57BL/6J mice2005

    • Author(s)
      Ishikawa, A.
    • Journal Title

      Genetical Research 85・2

      Pages: 127-137

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Quantitative trait loci for proteinuria in the focal glomerulosclerosis mouse model2005

    • Author(s)
      Kim, E.-H.
    • Journal Title

      Mammalian Genome 16・4

      Pages: 242-250

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary 2005 Annual Research Report
  • [Journal Article] Quantitative trait loci for glomerulosclerosis, kidney weight and body weight in the focal glomerulosclerosis mouse model2005

    • Author(s)
      Kim, E.-H.et al.
    • Journal Title

      Experimental Animals 54・4

      Pages: 319-325

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Further mapping of quantitative trait loci for postnatal growth in an intersubspecific backcross of wild Mus musculus castaneus and C57BL/6J mice2005

    • Author(s)
      Ishikawa, A. et al.
    • Journal Title

      Genetical Research 85・2

      Pages: 127-137

    • NAID

      120000976523

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Quantitative trait loci for proteinuria in the focal glomerulosclerosis mouse model2005

    • Author(s)
      Kim, E.-H.et al.
    • Journal Title

      Mammalian Genome 16・4

      Pages: 242-250

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Further mapping of quantitative trait loci for postnatal growth in an intersubspecific backcross of wild Mus musculus castaneus and C57BL/6J mice2005

    • Author(s)
      Ishikawa, A.
    • Journal Title

      Genetical Research 85・2

      Pages: 127-137

    • NAID

      120000976523

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Quantitative trait loci for proteinuria in the focal glomerulosclerosis mouse model2005

    • Author(s)
      Kim, E.-H.
    • Journal Title

      Mammalian Genome 16(印刷中)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Further mapping of quantitative trait loci for postnatal growth in an intersubspecific backcross of wild Mus musculus castaneus and C57BL/6J mice2005

    • Author(s)
      Ishikawa, A.
    • Journal Title

      Genetical Research 85(印刷中)

    • NAID

      120000976523

    • Related Report
      2004 Annual Research Report

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Published: 2004-04-01   Modified: 2016-04-21  

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